RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 PIGPP57054 158 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 IMPG1Q17R60 797 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 ASB16-AS1Q495Z4 193 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 TMEM14EPQ6UXP3 125 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 ARPINQ7Z6K5 226 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 ANGPTL5Q86XS5 388 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 OR5D16Q8NGK9 328 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 OR4K15Q8NH41 348 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 NPCDR1Q9BY65 106 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 LPAR5Q9H1C0 372 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 RNASE7Q9H1E1 156 aaKnown RBP-0.37□□□□□ -2.47
SRP54-214ENST00000630962 CELSR2Q9HCU4 2923 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 ABCA2Q9BZC7 2435 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 PIK3C2GO75747 1445 aa-0.38□□□□□ -2.47
SRP54-214ENST00000630962 PTPRDP23468 1912 aa-0.38□□□□□ -2.47
SRP54-214ENST00000630962 SERPINB9P50453 376 aa-0.38□□□□□ -2.47
SRP54-214ENST00000630962 UBE2BP63146 152 aa-0.38□□□□□ -2.47
SRP54-214ENST00000630962 SPINK13Q1W4C9 94 aa-0.38□□□□□ -2.47
SRP54-214ENST00000630962 PATE2Q6UY27 113 aa-0.38□□□□□ -2.47
SRP54-214ENST00000630962 LRRC18Q8N456 261 aa-0.38□□□□□ -2.47
SRP54-214ENST00000630962 FAM213BQ8TBF2 198 aa-0.38□□□□□ -2.47
SRP54-214ENST00000630962 CHCHD1Q96BP2 118 aaKnown RBP-0.38□□□□□ -2.47
SRP54-214ENST00000630962 PLEKHB2Q96CS7 222 aa-0.38□□□□□ -2.47
SRP54-214ENST00000630962 RBBP6Q7Z6E9 1792 aaKnown RBP-0.38□□□□□ -2.47
SRP54-214ENST00000630962 CACNA1AO00555 2505 aa-0.38□□□□□ -2.47
SRP54-214ENST00000630962 KIF1BO60333 1816 aa-0.38□□□□□ -2.47
SRP54-214ENST00000630962 TRBV19A0A075B6N1 114 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 LOC107984156A0A0G2JMH3 177 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 TMEM256-PLSCR3K7ERE1 68 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 TAX1BP3O14907 124 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 IGLV1-51P01701 117 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 HLA-EP13747 358 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 ERP29P30040 261 aaKnown RBP-0.39□□□□□ -2.47
SRP54-214ENST00000630962 COTL1Q14019 142 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 GLYATL3Q5SZD4 288 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 ARL17AQ8IVW1 177 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 GNPDA2Q8TDQ7 276 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 MALSU1Q96EH3 234 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 HYLS1Q96M11 299 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 ZNF714Q96N38 554 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 LLPHQ9BRT6 129 aaKnown RBP-0.39□□□□□ -2.47
SRP54-214ENST00000630962 PARVBQ9HBI1 364 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 COL24A1Q17RW2 1714 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 MIA2Q96PC5 1412 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 CHD9Q3L8U1 2897 aa-0.39□□□□□ -2.47
SRP54-214ENST00000630962 F8P00451 2351 aa-0.4□□□□□ -2.47
SRP54-214ENST00000630962 A0A087WUJ7 227 aa-0.4□□□□□ -2.47
SRP54-214ENST00000630962 SULT1C4O75897 302 aa-0.4□□□□□ -2.47
SRP54-214ENST00000630962 IFITM1P13164 125 aa-0.4□□□□□ -2.47
SRP54-214ENST00000630962 CEBPGP53567 150 aa-0.4□□□□□ -2.47
SRP54-214ENST00000630962 RPL37P61927 97 aaKnown RBP-0.4□□□□□ -2.47
SRP54-214ENST00000630962 AESQ08117 197 aa-0.4□□□□□ -2.47
SRP54-214ENST00000630962 VMO1Q7Z5L0 202 aa-0.4□□□□□ -2.47
SRP54-214ENST00000630962 TRAPPC5Q8IUR0 188 aa-0.4□□□□□ -2.47
SRP54-214ENST00000630962 C10orf111Q8N326 155 aa-0.4□□□□□ -2.47
SRP54-214ENST00000630962 POPDC3Q9HBV1 291 aa-0.4□□□□□ -2.47
SRP54-214ENST00000630962 PRELID3BQ9Y3B1 194 aa-0.4□□□□□ -2.47
SRP54-214ENST00000630962 AHCTF1Q8WYP5 2266 aa-0.41□□□□□ -2.47
SRP54-214ENST00000630962 TRAV4A0A0B4J268 109 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 DUXBA0A1W2PPF3 345 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 A0A1W2PRS3 328 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 hDV103S1A0JD37 113 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 IFNA7P01567 189 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 IGHV3-33P01772 117 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 PDE6GP18545 87 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 DYNLT3P51808 116 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 MIR22HGQ0VDD5 57 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 KLRD1Q13241 179 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 ZNF56Q15929 161 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 TMEM97Q5BJF2 176 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 C5orf17Q8NAS9 161 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 DDI1Q8WTU0 396 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 CCDC42Q96M95 316 aa-0.41□□□□□ -2.48
SRP54-214ENST00000630962 MACF1Q9UPN3 7388 aaKnown RBP-0.42□□□□□ -2.48
SRP54-214ENST00000630962 NUP98P52948 1817 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 A6NN06 94 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 C10orf142B7Z368 130 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 FXYD1O00168 92 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 RPP14O95059 124 aaKnown RBP-0.42□□□□□ -2.48
SRP54-214ENST00000630962 LYPLA2O95372 231 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 RPS3P23396 243 aaKnown RBP eCLIP-0.42□□□□□ -2.48
SRP54-214ENST00000630962 ATP5G3P48201 142 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 NEDD8Q15843 81 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 VMA21Q3ZAQ7 101 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 XAF1Q6GPH4 301 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 FOXI2Q6ZQN5 318 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 IFT20Q8IY31 132 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 ZHX1-C8orf76Q96EF9 292 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 ARL5BQ96KC2 179 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 NAT8BQ9UHF3 227 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 CEP164Q9UPV0 1460 aa-0.42□□□□□ -2.48
SRP54-214ENST00000630962 JMJD1CQ15652 2540 aa-0.43□□□□□ -2.48
SRP54-214ENST00000630962 K7ERJ3 54 aa-0.43□□□□□ -2.48
SRP54-214ENST00000630962 HMGB3O15347 200 aaKnown RBP-0.43□□□□□ -2.48
SRP54-214ENST00000630962 BANF1O75531 89 aa-0.43□□□□□ -2.48
SRP54-214ENST00000630962 HAND1O96004 215 aa-0.43□□□□□ -2.48
SRP54-214ENST00000630962 RPS17P08708 135 aaKnown RBP-0.43□□□□□ -2.48
SRP54-214ENST00000630962 EVI2AP22794 236 aa-0.43□□□□□ -2.48
SRP54-214ENST00000630962 OTUD6BQ8N6M0 293 aa-0.43□□□□□ -2.48
SRP54-214ENST00000630962 BTF3L4Q96K17 158 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms