RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ERVFC1-1P60608 527 aa13.84□□□□□ -0.19
TARDBP-228ENST00000629725 TMEM182Q6ZP80 229 aaPredicted RBP13.84□□□□□ -0.19
TARDBP-228ENST00000629725 GAGE12BA1L429 117 aa13.83□□□□□ -0.2
TARDBP-228ENST00000629725 GAGE7O76087 117 aa13.83□□□□□ -0.2
TARDBP-228ENST00000629725 RLN2P04090 185 aa13.83□□□□□ -0.2
TARDBP-228ENST00000629725 GAGE12FP0CL80 117 aa13.83□□□□□ -0.2
TARDBP-228ENST00000629725 GAGE12GP0CL81 117 aa13.83□□□□□ -0.2
TARDBP-228ENST00000629725 GAGE12IP0CL82 117 aa13.83□□□□□ -0.2
TARDBP-228ENST00000629725 ANXA3P12429 323 aa13.83□□□□□ -0.2
TARDBP-228ENST00000629725 CXCL3P19876 107 aa13.83□□□□□ -0.2
TARDBP-228ENST00000629725 TNFSF8P32971 234 aa13.83□□□□□ -0.2
TARDBP-228ENST00000629725 SRPXP78539 464 aa13.83□□□□□ -0.2
TARDBP-228ENST00000629725 SLIRPQ9GZT3 109 aaKnown RBP13.83□□□□□ -0.2
TARDBP-228ENST00000629725 FABP12A6NFH5 140 aa13.82□□□□□ -0.2
TARDBP-228ENST00000629725 IFNA5P01569 189 aa13.82□□□□□ -0.2
TARDBP-228ENST00000629725 RPL7P18124 248 aaKnown RBP13.82□□□□□ -0.2
TARDBP-228ENST00000629725 PSG3Q16557 428 aa13.82□□□□□ -0.2
TARDBP-228ENST00000629725 CCDC28AQ8IWP9 274 aa13.82□□□□□ -0.2
TARDBP-228ENST00000629725 SOSTQ9BQB4 213 aa13.82□□□□□ -0.2
TARDBP-228ENST00000629725 H3BMQ9 156 aa13.81□□□□□ -0.2
TARDBP-228ENST00000629725 H3BRN7 92 aa13.81□□□□□ -0.2
TARDBP-228ENST00000629725 SIVA1O15304 175 aa13.81□□□□□ -0.2
TARDBP-228ENST00000629725 NOL3O60936 208 aaKnown RBP13.81□□□□□ -0.2
TARDBP-228ENST00000629725 PRB4P10163 310 aaPredicted RBP13.81□□□□□ -0.2
TARDBP-228ENST00000629725 LRRC20Q8TCA0 184 aa13.81□□□□□ -0.2
TARDBP-228ENST00000629725 C18orf15Q96N68 181 aa13.81□□□□□ -0.2
TARDBP-228ENST00000629725 C20orf144Q9BQM9 153 aa13.81□□□□□ -0.2
TARDBP-228ENST00000629725 PRSS46E5RG02 174 aa13.8□□□□□ -0.2
TARDBP-228ENST00000629725 PITX3O75364 302 aa13.8□□□□□ -0.2
TARDBP-228ENST00000629725 SMR3BP02814 79 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-228ENST00000629725 RAP2BP61225 183 aa13.8□□□□□ -0.2
TARDBP-228ENST00000629725 RPP30P78346 268 aaKnown RBP13.8□□□□□ -0.2
TARDBP-228ENST00000629725 TMED4Q7Z7H5 227 aa13.8□□□□□ -0.2
TARDBP-228ENST00000629725 MCFD2Q8NI22 146 aa13.8□□□□□ -0.2
TARDBP-228ENST00000629725 SHANK2-AS3Q9BTD1 123 aa13.8□□□□□ -0.2
TARDBP-228ENST00000629725 A0A096LPF7 62 aa13.79□□□□□ -0.2
TARDBP-228ENST00000629725 SNURFLB1AK76 121 aa13.79□□□□□ -0.2
TARDBP-228ENST00000629725 FAUP35544 74 aaKnown RBP13.79□□□□□ -0.2
TARDBP-228ENST00000629725 KRTAP10-1P60331 282 aa13.79□□□□□ -0.2
TARDBP-228ENST00000629725 AKR1C1Q04828 323 aa13.79□□□□□ -0.2
TARDBP-228ENST00000629725 ICAM4Q14773 271 aa13.79□□□□□ -0.2
TARDBP-228ENST00000629725 RPUSD4Q96CM3 377 aaKnown RBP13.79□□□□□ -0.2
TARDBP-228ENST00000629725 TMPRSS5Q9H3S3 457 aa13.79□□□□□ -0.2
TARDBP-228ENST00000629725 MDFICQ9P1T7 246 aa13.79□□□□□ -0.2
TARDBP-228ENST00000629725 HIGD1AQ9Y241 93 aa13.79□□□□□ -0.2
TARDBP-228ENST00000629725 A0A087X0K7 114 aa13.78□□□□□ -0.2
TARDBP-228ENST00000629725 PIGBOS1A0A0B4J2F0 54 aa13.78□□□□□ -0.2
TARDBP-228ENST00000629725 KIR3DS1Q14943 382 aa13.78□□□□□ -0.2
TARDBP-228ENST00000629725 TMEM128Q5BJH2 165 aa13.78□□□□□ -0.2
TARDBP-228ENST00000629725 CIB3Q96Q77 187 aaPredicted RBP13.78□□□□□ -0.2
TARDBP-228ENST00000629725 DUXBA0A1W2PPF3 345 aa13.77□□□□□ -0.21
TARDBP-228ENST00000629725 MED6O75586 246 aa13.77□□□□□ -0.21
TARDBP-228ENST00000629725 TRIM63Q969Q1 353 aa13.77□□□□□ -0.21
TARDBP-228ENST00000629725 VSIG2Q96IQ7 327 aa13.77□□□□□ -0.21
TARDBP-228ENST00000629725 TNFRSF18Q9Y5U5 241 aa13.77□□□□□ -0.21
TARDBP-228ENST00000629725 FAM229AH3BQW9 127 aa13.76□□□□□ -0.21
TARDBP-228ENST00000629725 HYPMO75409 117 aa13.76□□□□□ -0.21
TARDBP-228ENST00000629725 IL5P05113 134 aa13.76□□□□□ -0.21
TARDBP-228ENST00000629725 VAMP1P23763 118 aa13.76□□□□□ -0.21
TARDBP-228ENST00000629725 PYDC2Q56P42 97 aa13.76□□□□□ -0.21
TARDBP-228ENST00000629725 GFI1BQ5VTD9 330 aa13.76□□□□□ -0.21
TARDBP-228ENST00000629725 CYP2G1PQ6ZSU1 146 aa13.76□□□□□ -0.21
TARDBP-228ENST00000629725 TOMM5Q8N4H5 51 aa13.76□□□□□ -0.21
TARDBP-228ENST00000629725 WRBO00258 174 aa13.75□□□□□ -0.21
TARDBP-228ENST00000629725 OR5G3P0C626 314 aa13.75□□□□□ -0.21
TARDBP-228ENST00000629725 DNAH10OSP0CZ25 163 aa13.75□□□□□ -0.21
TARDBP-228ENST00000629725 AP3S2P59780 193 aa13.75□□□□□ -0.21
TARDBP-228ENST00000629725 ACOT7LQ6ZUV0 252 aa13.75□□□□□ -0.21
TARDBP-228ENST00000629725 NFE4Q86UQ8 179 aa13.75□□□□□ -0.21
TARDBP-228ENST00000629725 PARD6GQ9BYG4 376 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-228ENST00000629725 A0A087WTM6 91 aa13.74□□□□□ -0.21
TARDBP-228ENST00000629725 J3QL48 77 aa13.74□□□□□ -0.21
TARDBP-228ENST00000629725 SYNGR2O43760 224 aa13.74□□□□□ -0.21
TARDBP-228ENST00000629725 SLC25A6P12236 298 aa13.74□□□□□ -0.21
TARDBP-228ENST00000629725 DAZ2Q13117 558 aaKnown RBP13.74□□□□□ -0.21
TARDBP-228ENST00000629725 SPANXN5Q5MJ07 72 aa13.74□□□□□ -0.21
TARDBP-228ENST00000629725 Q6ZTI0 123 aa13.74□□□□□ -0.21
TARDBP-228ENST00000629725 S100A7AQ86SG5 101 aa13.74□□□□□ -0.21
TARDBP-228ENST00000629725 CCDC190Q86UF4 302 aa13.74□□□□□ -0.21
TARDBP-228ENST00000629725 LRTM2Q8N967 370 aa13.74□□□□□ -0.21
TARDBP-228ENST00000629725 SMCO3A2RU48 225 aa13.73□□□□□ -0.21
TARDBP-228ENST00000629725 PMS2P5A8MQ11 134 aa13.73□□□□□ -0.21
TARDBP-228ENST00000629725 NXPH4O95158 308 aa13.73□□□□□ -0.21
TARDBP-228ENST00000629725 LINC00869P0C866 280 aa13.73□□□□□ -0.21
TARDBP-228ENST00000629725 PLP1P60201 277 aa13.73□□□□□ -0.21
TARDBP-228ENST00000629725 Q6ZSN1 163 aa13.73□□□□□ -0.21
TARDBP-228ENST00000629725 V9GYH0 126 aa13.73□□□□□ -0.21
TARDBP-228ENST00000629725 TRGV2A0A075B6R0 118 aa13.72□□□□□ -0.21
TARDBP-228ENST00000629725 H3BP45 60 aa13.72□□□□□ -0.21
TARDBP-228ENST00000629725 CXCL2P19875 107 aa13.72□□□□□ -0.21
TARDBP-228ENST00000629725 ANXA7P20073 488 aaKnown RBP13.72□□□□□ -0.21
TARDBP-228ENST00000629725 GCSHP23434 173 aa13.72□□□□□ -0.21
TARDBP-228ENST00000629725 PPP1R1AQ13522 171 aa13.72□□□□□ -0.21
TARDBP-228ENST00000629725 SLC25A21Q9BQT8 299 aaPredicted RBP13.72□□□□□ -0.21
TARDBP-228ENST00000629725 ZNF331Q9NQX6 463 aaPredicted RBP13.72□□□□□ -0.21
TARDBP-228ENST00000629725 J3KRW8 73 aa13.71□□□□□ -0.21
TARDBP-228ENST00000629725 SFT2D2O95562 160 aa13.71□□□□□ -0.21
TARDBP-228ENST00000629725 LCN15Q6UWW0 184 aa13.71□□□□□ -0.21
TARDBP-228ENST00000629725 RNF24Q9Y225 148 aa13.71□□□□□ -0.21
TARDBP-228ENST00000629725 STRAPQ9Y3F4 350 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms