RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 PQLC2Q6ZP29 291 aa12.44□□□□□ -0.42
CCNA1-203ENST00000625767 MCRIP2Q9BUT9 160 aaKnown RBP12.44□□□□□ -0.42
CCNA1-203ENST00000625767 NRN1Q9NPD7 142 aa12.44□□□□□ -0.42
CCNA1-203ENST00000625767 SOCS3O14543 225 aa12.43□□□□□ -0.42
CCNA1-203ENST00000625767 NDUFB4O95168 129 aa12.43□□□□□ -0.42
CCNA1-203ENST00000625767 CXorf1O96002 111 aa12.43□□□□□ -0.42
CCNA1-203ENST00000625767 HIST1H1EP10412 219 aaKnown RBP12.43□□□□□ -0.42
CCNA1-203ENST00000625767 S100A7P31151 101 aa12.43□□□□□ -0.42
CCNA1-203ENST00000625767 INSL3P51460 131 aa12.43□□□□□ -0.42
CCNA1-203ENST00000625767 SAT2Q96F10 170 aaPredicted RBP12.43□□□□□ -0.42
CCNA1-203ENST00000625767 GPR82Q96P67 336 aa12.43□□□□□ -0.42
CCNA1-203ENST00000625767 HRH4Q9H3N8 390 aa12.43□□□□□ -0.42
CCNA1-203ENST00000625767 ZNF256Q9Y2P7 627 aaPredicted RBP12.43□□□□□ -0.42
CCNA1-203ENST00000625767 A0A087X0K7 114 aa12.42□□□□□ -0.42
CCNA1-203ENST00000625767 TRAV8-2A0A0B4J237 113 aa12.42□□□□□ -0.42
CCNA1-203ENST00000625767 TEX46H3BTG2 121 aa12.42□□□□□ -0.42
CCNA1-203ENST00000625767 WIPF1O43516 503 aa12.42□□□□□ -0.42
CCNA1-203ENST00000625767 NBEAP1P0C6P0 100 aa12.42□□□□□ -0.42
CCNA1-203ENST00000625767 RNF182Q8N6D2 247 aa12.42□□□□□ -0.42
CCNA1-203ENST00000625767 AGRNO00468 2067 aa12.42□□□□□ -0.42
CCNA1-203ENST00000625767 TRBV19A0A075B6N1 114 aa12.42□□□□□ -0.42
CCNA1-203ENST00000625767 DNASE2O00115 360 aaPredicted RBP12.42□□□□□ -0.42
CCNA1-203ENST00000625767 DEFB1P60022 68 aa12.42□□□□□ -0.42
CCNA1-203ENST00000625767 KRTAP10-11P60412 298 aa12.42□□□□□ -0.42
CCNA1-203ENST00000625767 C20orf173Q96LM9 149 aa12.42□□□□□ -0.42
CCNA1-203ENST00000625767 K7EQG2 157 aa12.41□□□□□ -0.42
CCNA1-203ENST00000625767 NMBP08949 121 aa12.41□□□□□ -0.42
CCNA1-203ENST00000625767 UBE2G2P60604 165 aa12.41□□□□□ -0.42
CCNA1-203ENST00000625767 SAMD5Q5TGI4 173 aa12.41□□□□□ -0.42
CCNA1-203ENST00000625767 EXOC3-AS1Q8N2X6 119 aa12.41□□□□□ -0.42
CCNA1-203ENST00000625767 RNF24Q9Y225 148 aa12.41□□□□□ -0.42
CCNA1-203ENST00000625767 CD7P09564 240 aa12.4□□□□□ -0.42
CCNA1-203ENST00000625767 ZNF688P0C7X2 276 aa12.4□□□□□ -0.42
CCNA1-203ENST00000625767 RANP62826 216 aaKnown RBP12.4□□□□□ -0.42
CCNA1-203ENST00000625767 LCN12Q6JVE5 192 aa12.4□□□□□ -0.42
CCNA1-203ENST00000625767 SUN5Q8TC36 379 aa12.4□□□□□ -0.42
CCNA1-203ENST00000625767 WFDC10AQ9H1F0 79 aa12.4□□□□□ -0.42
CCNA1-203ENST00000625767 YTHDF2Q9Y5A9 579 aaKnown RBP12.4□□□□□ -0.42
CCNA1-203ENST00000625767 TRAV25A0A0B4J276 109 aa12.39□□□□□ -0.43
CCNA1-203ENST00000625767 ZNF124Q15973 351 aa12.39□□□□□ -0.43
CCNA1-203ENST00000625767 OR2K2Q8NGT1 345 aa12.39□□□□□ -0.43
CCNA1-203ENST00000625767 C16orf92Q96LL3 132 aa12.39□□□□□ -0.43
CCNA1-203ENST00000625767 SPAG8Q99932 426 aaPredicted RBP12.39□□□□□ -0.43
CCNA1-203ENST00000625767 ZNF331Q9NQX6 463 aaPredicted RBP12.39□□□□□ -0.43
CCNA1-203ENST00000625767 TRAV1-1A0A0B4J248 108 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 CD5P06127 495 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 BLOC1S1P78537 153 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 BEAN1Q3B7T3 259 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 ZNF767PQ75MW2 155 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 LYPD6BQ8NI32 183 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 LRRC20Q8TCA0 184 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 ZNF705FA8MVS1 300 aaPredicted RBP12.38□□□□□ -0.43
CCNA1-203ENST00000625767 M0R3E3 92 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 PAFAH1B2P68402 229 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 ODF3L2Q3SX64 289 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 LINC00052Q96N35 136 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 PRR25Q96S07 402 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 GNG13Q9P2W3 67 aa12.38□□□□□ -0.43
CCNA1-203ENST00000625767 GGTLC3B5MD39 225 aa12.37□□□□□ -0.43
CCNA1-203ENST00000625767 ICAM4Q14773 271 aa12.37□□□□□ -0.43
CCNA1-203ENST00000625767 Q9H3A6 140 aa12.37□□□□□ -0.43
CCNA1-203ENST00000625767 TMEM167BQ9NRX6 74 aa12.37□□□□□ -0.43
CCNA1-203ENST00000625767 OR4C46A6NHA9 309 aa12.36□□□□□ -0.43
CCNA1-203ENST00000625767 FAM74A7A6NL05 159 aa12.36□□□□□ -0.43
CCNA1-203ENST00000625767 PAGE4O60829 102 aa12.36□□□□□ -0.43
CCNA1-203ENST00000625767 EGFEM1PQ0D2K5 195 aa12.36□□□□□ -0.43
CCNA1-203ENST00000625767 GUK1Q16774 197 aa12.36□□□□□ -0.43
CCNA1-203ENST00000625767 PSMG4Q5JS54 123 aa12.36□□□□□ -0.43
CCNA1-203ENST00000625767 APRG1Q8IVJ8 170 aa12.36□□□□□ -0.43
CCNA1-203ENST00000625767 MAP6D1Q9H9H5 199 aa12.36□□□□□ -0.43
CCNA1-203ENST00000625767 PRAC2D3DTV9 90 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 F6UB75 175 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 ISLRO14498 428 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 RGS13O14921 159 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 HBE1P02100 147 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 PRB2P02812 416 aaPredicted RBP12.35□□□□□ -0.43
CCNA1-203ENST00000625767 ATP5G3P48201 142 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 MEOX2P50222 304 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 DEFB131AP59861 70 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 PDE6HQ13956 83 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 C19orf73Q9NVV2 129 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 ZNF705DP0CH99 300 aaPredicted RBP12.35□□□□□ -0.43
CCNA1-203ENST00000625767 ZNF705BP0CI00 300 aaPredicted RBP12.35□□□□□ -0.43
CCNA1-203ENST00000625767 PSMB3P49720 205 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 CD81P60033 236 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 GNG5P63218 68 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 HAGHQ16775 308 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 GDF5OSQ5U4N7 250 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 SLC50A1Q9BRV3 221 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 GPR61Q9BZJ8 451 aa12.35□□□□□ -0.43
CCNA1-203ENST00000625767 TRAV2A0A0B4J234 112 aa12.34□□□□□ -0.43
CCNA1-203ENST00000625767 PGPA6NDG6 321 aa12.34□□□□□ -0.43
CCNA1-203ENST00000625767 ZNF253O75346 499 aa12.34□□□□□ -0.43
CCNA1-203ENST00000625767 SUMO1P63165 101 aaKnown RBP12.34□□□□□ -0.43
CCNA1-203ENST00000625767 PSG3Q16557 428 aa12.33□□□□□ -0.44
CCNA1-203ENST00000625767 CLLU1Q5K131 121 aa12.33□□□□□ -0.44
CCNA1-203ENST00000625767 CST9LP1Q5W188 147 aa12.33□□□□□ -0.44
CCNA1-203ENST00000625767 CITED4Q96RK1 184 aa12.33□□□□□ -0.44
CCNA1-203ENST00000625767 RARRES2Q99969 163 aa12.33□□□□□ -0.44
CCNA1-203ENST00000625767 RPH3ALQ9UNE2 315 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms