RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TMEM14EPQ6UXP3 125 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 C3orf56Q8N813 242 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 OR4E2Q8NGC2 313 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 OR4C6Q8NH72 309 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 PFN4Q8NHR9 129 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 TMEM106AQ96A25 262 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 ZNF714Q96N38 554 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 YPEL2Q96QA6 119 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 NAA38Q9BRA0 125 aaKnown RBP1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 TXNDC17Q9BRA2 123 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 LINC00470Q9BZP3 86 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 TAF9BQ9HBM6 251 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 TXNL4BQ9NX01 149 aaKnown RBP1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 GNG8Q9UK08 70 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 EPRSP07814 1512 aaKnown RBP1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 STRCP1A6NGW2 1772 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 ADCY10Q96PN6 1610 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 ARHGEF28Q8N1W1 1705 aaKnown RBP1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 MALRD1Q5VYJ5 2156 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 PREX1Q8TCU6 1659 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 TRAPPC8Q9Y2L5 1435 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 MAGI3Q5TCQ9 1506 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 PTPRBP23467 1997 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 TRGV10A0A0A0MS01 117 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 TRBV7-6A0A0J9YX20 115 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 A0A1B0GVG6 124 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 FAM25AB3EWG3 89 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 FAM25CB3EWG5 89 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 FAM25GB3EWG6 89 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 TP53I11O14683 189 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 RER1O15258 196 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 GNRH2O43555 120 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 HIST1H2BKO60814 126 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 IFNGP01579 166 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 MT-ND6P03923 174 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 TCRAP04437 139 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 HIST1H2BJP06899 126 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 MSMBP08118 114 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 CRYGSP22914 178 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 CD24P25063 80 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 RPL22P35268 128 aaKnown RBP1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 RPL35P42766 123 aaKnown RBP1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 MAXP61244 160 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 COPZ1P61923 177 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 DYNLT1P63172 113 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 SELENOWP63302 87 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 EMX2Q04743 252 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 FAM27BQ5VT28 67 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 LYZL1Q6UWQ5 148 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 DPPA3Q6W0C5 159 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 IDO2Q6ZQW0 420 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 PHF5AQ7RTV0 110 aaKnown RBP1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 CTAGE3PQ8IX95 158 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 WFDC11Q8NEX6 87 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 OR5H6Q8NGV6 325 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 OR4K15Q8NH41 348 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 AQP3Q92482 292 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 TMEM203Q969S6 136 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 TTTY12Q9BZ98 90 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 BANF2Q9H503 90 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 CCL26Q9Y258 94 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 TIMM9Q9Y5J7 89 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 ARHGAP32A7KAX9 2087 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 MPDZO75970 2070 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 NALCNQ8IZF0 1738 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 UHRF1BP1LA0JNW5 1464 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 POLA1P09884 1462 aaPredicted RBP1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 MYH13Q9UKX3 1938 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 TTC37Q6PGP7 1564 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 RIMS1Q86UR5 1692 aaKnown RBP1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 CFAP43Q8NDM7 1665 aa1.42□□□□□ -2.18
SCAMP1-205ENST00000614488 DSPPQ9NZW4 1301 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 KMT2BQ9UMN6 2715 aaPredicted RBP1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 ABCA5Q8WWZ7 1642 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 TRAV7A0A075B6U4 112 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 TRGV5A0A0B4J1U4 118 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 TRAV3A0A0B4J244 114 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 FAM236AA0A1B0GUQ0 79 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 FAM236BA0A1B0GV22 79 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 MEIS3P1A6NDR6 274 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 TMEM235A6NFC5 223 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 SHBGP04278 402 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 GPX1P07203 203 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 HLA-EP13747 358 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 FOXA3P55318 350 aaPredicted RBP1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 DIAPH2-AS1Q14236 149 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 HSD17B12Q53GQ0 312 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 SLC35E3Q7Z769 313 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 OR4S1Q8NGB4 309 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 HS3ST2Q9Y278 367 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 FAM215AQ9Y5M1 114 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 HSPE1-MOB4S4R3N1 261 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 GRIN2AQ12879 1464 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 PIK3C2AO00443 1686 aa1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 MYH9P35579 1960 aaKnown RBP1.41□□□□□ -2.18
SCAMP1-205ENST00000614488 DISP2A7MBM2 1401 aa1.4□□□□□ -2.18
SCAMP1-205ENST00000614488 LRP5O75197 1615 aa1.4□□□□□ -2.18
SCAMP1-205ENST00000614488 MYH1P12882 1939 aa1.4□□□□□ -2.18
SCAMP1-205ENST00000614488 IGLV3-9A0A075B6K5 115 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 A0A0J9YX75 114 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms