RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CD5P06127 495 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 CD7P09564 240 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 ZNF688P0C7X2 276 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 STAG3L2P0CL84 134 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 STAG3L3P0CL85 134 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 SULT1A2P50226 295 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 FGF8P55075 233 aaPredicted RBP5.74□□□□□ -1.49
MSH6-211ENST00000606499 TAS2R45P59539 299 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 PAFAH1B2P68402 229 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 ODF3L2Q3SX64 289 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 KPRPQ5T749 579 aaPredicted RBP5.74□□□□□ -1.49
MSH6-211ENST00000606499 IGFL4Q6B9Z1 124 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 LCN15Q6UWW0 184 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 IQCF2Q8IXL9 164 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 BLNKQ8WV28 456 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 RNF141Q8WVD5 230 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 MAP1LC3BQ9GZQ8 125 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 WFDC10AQ9H1F0 79 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 OR51M1Q9H341 326 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 ZNF586Q9NXT0 402 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 UBQLN2Q9UHD9 624 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 TRBV19A0A075B6N1 114 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 TRAV2A0A0B4J234 112 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 TRAV8-2A0A0B4J237 113 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 NDUFB4O95168 129 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 CXorf1O96002 111 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 PRB4P10163 310 aaPredicted RBP5.73□□□□□ -1.49
MSH6-211ENST00000606499 HIST1H1EP10412 219 aaKnown RBP5.73□□□□□ -1.49
MSH6-211ENST00000606499 HLA-DMBP28068 263 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 GCHFRP30047 84 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 MEOX2P50222 304 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 CD81P60033 236 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 ZNF124Q15973 351 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 TEX261Q6UWH6 196 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 DPPA3Q6W0C5 159 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 PQLC2Q6ZP29 291 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 RNF182Q8N6D2 247 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 SAT2Q96F10 170 aaPredicted RBP5.73□□□□□ -1.49
MSH6-211ENST00000606499 C16orf92Q96LL3 132 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 HRH4Q9H3N8 390 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 TMPRSS5Q9H3S3 457 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 MAP6D1Q9H9H5 199 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 NOTCH3Q9UM47 2321 aa5.73□□□□□ -1.49
MSH6-211ENST00000606499 ZNF705EA8MWA4 302 aaPredicted RBP5.72□□□□□ -1.49
MSH6-211ENST00000606499 ISLRO14498 428 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 H2AFB1P0C5Y9 115 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 NBEAP1P0C6P0 100 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 PSMB3P49720 205 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 RAB5CP51148 216 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 DEFB1P60022 68 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 GUK1Q16774 197 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 PSMG4Q5JS54 123 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 GTSCR1Q86UQ5 136 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 APRG1Q8IVJ8 170 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 Q8N1Y9 231 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 ZNF680Q8NEM1 530 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 LRRC20Q8TCA0 184 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 SFT2D1Q8WV19 159 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 PCNPQ8WW12 178 aaKnown RBP5.72□□□□□ -1.49
MSH6-211ENST00000606499 MBD3L1Q8WWY6 194 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 C20orf173Q96LM9 149 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 ZNF331Q9NQX6 463 aaPredicted RBP5.72□□□□□ -1.49
MSH6-211ENST00000606499 AURKAIP1Q9NWT8 199 aaPredicted RBP5.72□□□□□ -1.49
MSH6-211ENST00000606499 NBEAL2Q6ZNJ1 2754 aa5.72□□□□□ -1.49
MSH6-211ENST00000606499 OR11H12B2RN74 326 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 DEFB131AP59861 70 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 UBE2G2P60604 165 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 SNRPD3P62318 126 aaKnown RBP5.71□□□□□ -1.5
MSH6-211ENST00000606499 RANP62826 216 aaKnown RBP5.71□□□□□ -1.5
MSH6-211ENST00000606499 CCL20P78556 96 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 IFITM2Q01629 132 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 PDE6HQ13956 83 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 EXOC3-AS1Q8N2X6 119 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 DEFB125Q8N687 156 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 SUN5Q8TC36 379 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 LINC00052Q96N35 136 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 SLC50A1Q9BRV3 221 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 C19orf73Q9NVV2 129 aa5.71□□□□□ -1.5
MSH6-211ENST00000606499 ZMAT5Q9UDW3 170 aaKnown RBP5.71□□□□□ -1.5
MSH6-211ENST00000606499 ZNF705FA8MVS1 300 aaPredicted RBP5.7□□□□□ -1.5
MSH6-211ENST00000606499 GGTLC3B5MD39 225 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 F6UB75 175 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 M0R3E3 92 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 ZNF253O75346 499 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 IFNA7P01567 189 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 ID1P41134 155 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 PSG9Q00887 426 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 ICAM4Q14773 271 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 PSG3Q16557 428 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 GDF5OSQ5U4N7 250 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 SAMD13Q5VXD3 122 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 ZNF738Q8NE65 137 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 CITED4Q96RK1 184 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 Q9H3A6 140 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 TMEM167BQ9NRX6 74 aa5.7□□□□□ -1.5
MSH6-211ENST00000606499 YTHDF2Q9Y5A9 579 aaKnown RBP5.7□□□□□ -1.5
MSH6-211ENST00000606499 TRAV1-1A0A0B4J248 108 aa5.69□□□□□ -1.5
MSH6-211ENST00000606499 KNCNA6PVL3 124 aa5.69□□□□□ -1.5
MSH6-211ENST00000606499 PRAC2D3DTV9 90 aa5.69□□□□□ -1.5
MSH6-211ENST00000606499 K7EIL1 84 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms