RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 UBE2D1P51668 147 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 ZNF138P52744 262 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 SUB1P53999 127 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 NXPH1P58417 271 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 B3GALT5-AS1P59052 145 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 RPS16P62249 146 aaKnown RBP3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 CACNG7P62955 275 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 UBE2L3P68036 154 aaKnown RBP3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 TTC32Q5I0X7 151 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 MORN5Q5VZ52 161 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 MORN3Q6PF18 240 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 PATE2Q6UY27 113 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 C16orf47Q6ZP98 133 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 YRDCQ86U90 279 aaKnown RBP3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 PDPNQ86YL7 162 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 ORMDL3Q8N138 153 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 SLC22A18ASQ8N1D0 253 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 LRRC75A-AS1Q8N1F1 130 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 LYPD1Q8N2G4 141 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 ZCCHC24Q8N2G6 241 aaKnown RBP3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 OR4C13Q8NGP0 309 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 OSR1Q8TAX0 266 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 S1PR3Q99500 378 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 MCRIP2Q9BUT9 160 aaKnown RBP3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 RTL8AQ9BWD3 113 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 SLC25A39Q9BZJ4 359 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 IMUPQ9GZP8 106 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 PROK2Q9HC23 129 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 RAB9BQ9NP90 201 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 NHP2Q9NX24 153 aaKnown RBP3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 RNF186Q9NXI6 227 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 TMEM14CQ9P0S9 112 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 VPREB3Q9UKI3 123 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGKV2D-26A0A0A0MRZ7 120 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 TRAV12-1A0A0B4J245 112 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 TRAV5A0A0B4J249 113 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 TRAV25A0A0B4J276 109 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 A8MWV9 139 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 C5orf67F2Z3F1 127 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 HSPB6O14558 160 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 SPINT2O43291 252 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 FCGR3BO75015 233 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 DPM2O94777 84 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 NPYP01303 97 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 TCRAP04437 139 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 IL4P05112 153 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 PATE4P0C8F1 98 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 SCGB1C2P0DMR2 95 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 RNASE2P10153 161 aaKnown RBP3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 RPL13AP40429 203 aaKnown RBP3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 NMUP48645 174 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 FOXG1P55316 489 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 FHL3Q13643 280 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 TWIST1Q15672 202 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 ADIPOQQ15848 244 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 TMEM30BQ3MIR4 351 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 SPRNQ5BIV9 151 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 SPINK9Q5DT21 86 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 C10orf113Q5VZT2 155 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 OR11H6Q8NGC7 330 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 OR8A1Q8NGG7 326 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 OR10J6PQ8NGY7 276 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 MYOZ3Q8TDC0 251 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 RLN3Q8WXF3 142 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 RASL10AQ92737 203 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 HINT2Q9BX68 163 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 SRXN1Q9BYN0 137 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 PRRG4Q9BZD6 226 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 NXT2Q9NPJ8 142 aaKnown RBP3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 OTORQ9NRC9 128 aa3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 KLF13Q9Y2Y9 288 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P50-201ENST00000605814 TNCP24821 2201 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 TRAV3A0A0B4J244 114 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 IQCF6A8MYZ5 107 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 KLK10O43240 276 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 COX7A2P2O60397 106 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGLV2-11P01706 119 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 RBP4P02753 201 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGHV4-34P06331 123 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 FAM106CPP0CH98 169 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 MYOD1P15172 320 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 ACP1P24666 158 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 CD27P26842 260 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 CFHR2P36980 270 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 GFERP55789 205 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 DEFB103AP81534 67 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 ERHP84090 104 aaKnown RBP3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 DIAPH2-AS1Q14236 149 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 FAM106AQ4KMX7 169 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 DEFB121Q5J5C9 76 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 AMTNQ6UX39 209 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 LINC00696Q6ZRV3 163 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 C11orf53Q8IXP5 236 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 YAF2Q8IY57 180 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 CIARTQ8N365 385 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 MAPKAPK5-AS1Q8N8E1 139 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 TMEM75Q8N9X5 138 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 RFESDQ8TAC1 157 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 GLMPQ8WWB7 406 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms