RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 PSG3Q16557 428 aa9.62□□□□□ -0.87
HDAC5-208ENST00000588419 TMEM256Q8N2U0 113 aa9.62□□□□□ -0.87
HDAC5-208ENST00000588419 C6orf223Q8N319 242 aa9.62□□□□□ -0.87
HDAC5-208ENST00000588419 RNF141Q8WVD5 230 aa9.62□□□□□ -0.87
HDAC5-208ENST00000588419 RPUSD4Q96CM3 377 aaKnown RBP9.62□□□□□ -0.87
HDAC5-208ENST00000588419 PARD6GQ9BYG4 376 aaPredicted RBP9.62□□□□□ -0.87
HDAC5-208ENST00000588419 ARV1Q9H2C2 271 aa9.62□□□□□ -0.87
HDAC5-208ENST00000588419 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
HDAC5-208ENST00000588419 FLVCR2Q9UPI3 526 aa9.62□□□□□ -0.87
HDAC5-208ENST00000588419 RYR1P21817 5038 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 A0A087X0K7 114 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 H3BTX0 84 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 TSPOP30536 169 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 TAS2R60P59551 318 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 SELENOTP62341 195 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 DLK1P80370 383 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 ID3Q02535 119 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 OR5I1Q13606 314 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 C4orf46Q504U0 113 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 TRIQKQ629K1 86 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 S100A7AQ86SG5 101 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 CCDC190Q86UF4 302 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 ZNRF2Q8NHG8 242 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 LINC00588Q9Y4M8 146 aa9.61□□□□□ -0.87
HDAC5-208ENST00000588419 CBY3A6NI87 242 aa9.6□□□□□ -0.87
HDAC5-208ENST00000588419 PMS2P5A8MQ11 134 aa9.6□□□□□ -0.87
HDAC5-208ENST00000588419 CDKN1BP46527 198 aa9.6□□□□□ -0.87
HDAC5-208ENST00000588419 UBE2MP61081 183 aaKnown RBP9.6□□□□□ -0.87
HDAC5-208ENST00000588419 OR10P1Q8NGE3 313 aa9.6□□□□□ -0.87
HDAC5-208ENST00000588419 KRTAP4-5Q9BYR2 181 aa9.6□□□□□ -0.87
HDAC5-208ENST00000588419 GSKIPQ9P0R6 139 aa9.6□□□□□ -0.87
HDAC5-208ENST00000588419 TIMM8BQ9Y5J9 83 aaPredicted RBP9.6□□□□□ -0.87
HDAC5-208ENST00000588419 ABCA13Q86UQ4 5058 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 A0A0J9YY99 117 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 GOSR2O14653 212 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 COX7A2P2O60397 106 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 OR4E1P0C645 316 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 PLP1P60201 277 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 KIR3DS1Q14943 382 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 IAH1Q2TAA2 248 aaPredicted RBP9.59□□□□□ -0.87
HDAC5-208ENST00000588419 SPANXN2Q5MJ10 180 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 TEPPQ6URK8 271 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 LCN15Q6UWW0 184 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 PATE2Q6UY27 113 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 SSX7Q7RTT5 188 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 LINC00305Q7Z4B0 112 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 TMEM263Q8WUH6 116 aaKnown RBP9.59□□□□□ -0.87
HDAC5-208ENST00000588419 DEDD2Q8WXF8 326 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 SMIM8Q96KF7 97 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 NPVFQ9HCQ7 196 aa9.59□□□□□ -0.87
HDAC5-208ENST00000588419 GAGE12BA1L429 117 aa9.58□□□□□ -0.88
HDAC5-208ENST00000588419 GAGE7O76087 117 aa9.58□□□□□ -0.88
HDAC5-208ENST00000588419 NDUFB6O95139 128 aa9.58□□□□□ -0.88
HDAC5-208ENST00000588419 GAGE12FP0CL80 117 aa9.58□□□□□ -0.88
HDAC5-208ENST00000588419 GAGE12GP0CL81 117 aa9.58□□□□□ -0.88
HDAC5-208ENST00000588419 GAGE12IP0CL82 117 aa9.58□□□□□ -0.88
HDAC5-208ENST00000588419 TMEM14EPQ6UXP3 125 aa9.58□□□□□ -0.88
HDAC5-208ENST00000588419 ZNF546Q86UE3 836 aa9.58□□□□□ -0.88
HDAC5-208ENST00000588419 OR10J6PQ8NGY7 276 aa9.58□□□□□ -0.88
HDAC5-208ENST00000588419 RNASE8Q8TDE3 154 aaKnown RBP9.58□□□□□ -0.88
HDAC5-208ENST00000588419 SLC50A1Q9BRV3 221 aa9.58□□□□□ -0.88
HDAC5-208ENST00000588419 SRRQ9GZT4 340 aa9.58□□□□□ -0.88
HDAC5-208ENST00000588419 RCL1Q9Y2P8 373 aaKnown RBP9.58□□□□□ -0.88
HDAC5-208ENST00000588419 HSPG2P98160 4391 aa9.57□□□□□ -0.88
HDAC5-208ENST00000588419 TRAV26-1A0A087WT03 109 aa9.57□□□□□ -0.88
HDAC5-208ENST00000588419 H7BYZ3 331 aa9.57□□□□□ -0.88
HDAC5-208ENST00000588419 SLC17A3O00476 420 aa9.57□□□□□ -0.88
HDAC5-208ENST00000588419 AGPAT2O15120 278 aa9.57□□□□□ -0.88
HDAC5-208ENST00000588419 MRPS12O15235 138 aaKnown RBP9.57□□□□□ -0.88
HDAC5-208ENST00000588419 BAK1Q16611 211 aa9.57□□□□□ -0.88
HDAC5-208ENST00000588419 GFI1BQ5VTD9 330 aa9.57□□□□□ -0.88
HDAC5-208ENST00000588419 BPIFA4PQ86YQ2 179 aa9.57□□□□□ -0.88
HDAC5-208ENST00000588419 CCDC28AQ8IWP9 274 aa9.57□□□□□ -0.88
HDAC5-208ENST00000588419 MAPKAPK5-AS1Q8N8E1 139 aa9.57□□□□□ -0.88
HDAC5-208ENST00000588419 ZBTB8BQ8NAP8 495 aaPredicted RBP9.57□□□□□ -0.88
HDAC5-208ENST00000588419 GNPNAT1Q96EK6 184 aaPredicted RBP9.57□□□□□ -0.88
HDAC5-208ENST00000588419 ZNF331Q9NQX6 463 aaPredicted RBP9.57□□□□□ -0.88
HDAC5-208ENST00000588419 RNF24Q9Y225 148 aa9.57□□□□□ -0.88
HDAC5-208ENST00000588419 NAP1L6A6NFF2 107 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 SNURFLB1AK76 121 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 PRAC2D3DTV9 90 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 L7N2F9 121 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 CCSO14618 274 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 RLN2P04090 185 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 CXCL2P19875 107 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 BCAP31P51572 246 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 VAMP2P63027 116 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 ARL16Q0P5N6 197 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 MORN5Q5VZ52 161 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 C10orf113Q5VZT2 155 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 ZNF493Q6ZR52 646 aa9.56□□□□□ -0.88
HDAC5-208ENST00000588419 LSM5Q9Y4Y9 91 aaKnown RBP9.56□□□□□ -0.88
HDAC5-208ENST00000588419 CENPXA8MT69 81 aa9.55□□□□□ -0.88
HDAC5-208ENST00000588419 FAM25EA8MYX2 175 aa9.55□□□□□ -0.88
HDAC5-208ENST00000588419 TSC22D2O75157 780 aa9.55□□□□□ -0.88
HDAC5-208ENST00000588419 OPCMLQ14982 345 aa9.55□□□□□ -0.88
HDAC5-208ENST00000588419 PXDC1Q5TGL8 231 aa9.55□□□□□ -0.88
HDAC5-208ENST00000588419 SPATA12Q7Z6I5 190 aa9.55□□□□□ -0.88
HDAC5-208ENST00000588419 MGST2Q99735 147 aa9.55□□□□□ -0.88
HDAC5-208ENST00000588419 TRAV12-3A0A0B4J271 114 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms