RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CDC42P60953 191 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 BASP1P80723 227 aaKnown RBP1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 ZNF826PQ6ZT77 177 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 KRT222Q8N1A0 295 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 OR4E2Q8NGC2 313 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 CDC26Q8NHZ8 85 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 PPTC7Q8NI37 304 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 BORCS7Q96B45 105 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 SLC50A1Q9BRV3 221 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 PRELID3BQ9Y3B1 194 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 FLG2Q5D862 2391 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 ZDBF2Q9HCK1 2354 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 CDK5RAP2Q96SN8 1893 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 TANC1Q9C0D5 1861 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 ANAPC1Q9H1A4 1944 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 REV3LO60673 3130 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 FUOMA2VDF0 154 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 KRTAP10-4P60372 401 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 Q6ZQT0 140 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 OR6V1Q8N148 313 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 HIST3H2BBQ8N257 126 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 SIGLECL1Q8N7X8 197 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 OR4D11Q8NGI4 311 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 CCDC90BQ9GZT6 254 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 TLNRD1Q9H1K6 362 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 C14orf105Q9NVL8 296 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 OR5AC2Q9NZP5 309 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 MYO5AQ9Y4I1 1855 aaKnown RBP1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 SPTBN4Q9H254 2564 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 ALPK2Q86TB3 2170 aa1.37□□□□□ -2.19
SMCHD1-205ENST00000581383 PARP14Q460N5 1801 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 CHD8Q9HCK8 2581 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 A0A0D9SG52 128 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 hADV38S2A0JD32 116 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 HCRTO43612 131 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 OR2J2O76002 312 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 RBP1P09455 135 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 CAPZBP47756 277 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 EDDM3AQ14507 147 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 CDK10Q15131 360 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 ALX1Q15699 326 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 OR52R1Q8NGF1 315 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 AQP3Q92482 292 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 TRIM4Q9C037 500 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 IDI2-AS1Q9NZ38 188 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 PLXNA1Q9UIW2 1896 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 Q9Y3F1 56 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 MYH1P12882 1939 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 TENM1Q9UKZ4 2725 aa1.36□□□□□ -2.19
SMCHD1-205ENST00000581383 USP34Q70CQ2 3546 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 PLXND1Q9Y4D7 1925 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 POLEQ07864 2286 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 TRAV1-1A0A0B4J248 108 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 LOC730098B7Z3J9 87 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 C5orf67F2Z3F1 127 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 CCL16O15467 120 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 HAND1O96004 215 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 SERPINA1P01009 418 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 RNASE3P12724 160 aaKnown RBP1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 RHEBQ15382 184 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 SPA17Q15506 151 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 TMEM97Q5BJF2 176 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 CT55Q8WUE5 264 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 CCDC94Q9BW85 323 aaPredicted RBP1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 C20orf27Q9GZN8 174 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 FBXO5Q9UKT4 447 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 MYO15AQ9UKN7 3530 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 EPG5Q9HCE0 2579 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 ZNF106Q9H2Y7 1883 aaKnown RBP1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 DMDP11532 3685 aa1.35□□□□□ -2.19
SMCHD1-205ENST00000581383 ANKRD11Q6UB99 2663 aaPredicted RBP1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 NCOR2Q9Y618 2525 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 SCN10AQ9Y5Y9 1956 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 TPRP12270 2363 aaKnown RBP1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 LAMA4Q16363 1823 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 DOCK3Q8IZD9 2030 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 FAM208BQ5VWN6 2430 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 USP24Q9UPU5 2620 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 ASAH2BP0C7U1 165 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 COX6A1P12074 109 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 S100A4P26447 101 aaKnown RBP1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 ARPP19P56211 112 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 MRPS25P82663 173 aaKnown RBP1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 TAF1AQ15573 450 aaPredicted RBP1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 IAH1Q2TAA2 248 aaPredicted RBP1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 C12orf74Q32Q52 190 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 SPANXN5Q5MJ07 72 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 C12orf29Q8N999 325 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 GDPD1Q8N9F7 314 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 TCEAL4Q96EI5 215 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 SIGMAR1Q99720 223 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 LXNQ9BS40 222 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 RNASE7Q9H1E1 156 aaKnown RBP1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 UQCC1Q9NVA1 299 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 CYSLTR1Q9Y271 337 aa1.34□□□□□ -2.19
SMCHD1-205ENST00000581383 FASNP49327 2511 aaKnown RBP1.34□□□□□ -2.2
SMCHD1-205ENST00000581383 WDFY4Q6ZS81 3184 aa1.34□□□□□ -2.2
SMCHD1-205ENST00000581383 SIP14410 1827 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 NAV2Q8IVL1 2488 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms