RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 KLF12Q9Y4X4 402 aa13.7□□□□□ -0.22
EIF4A1-216ENST00000580888 TRBV19A0A075B6N1 114 aa13.69□□□□□ -0.22
EIF4A1-216ENST00000580888 PEX7O00628 323 aa13.69□□□□□ -0.22
EIF4A1-216ENST00000580888 IGLV2-8P01709 118 aa13.69□□□□□ -0.22
EIF4A1-216ENST00000580888 TRGV3P03979 118 aa13.69□□□□□ -0.22
EIF4A1-216ENST00000580888 RANP62826 216 aaKnown RBP13.69□□□□□ -0.22
EIF4A1-216ENST00000580888 CLEC19AQ6UXS0 136 aa13.69□□□□□ -0.22
EIF4A1-216ENST00000580888 PYGO2Q9BRQ0 406 aa13.69□□□□□ -0.22
EIF4A1-216ENST00000580888 RABAC1Q9UI14 185 aa13.69□□□□□ -0.22
EIF4A1-216ENST00000580888 U3KQE9 123 aa13.69□□□□□ -0.22
EIF4A1-216ENST00000580888 DNAH3Q8TD57 4116 aa13.69□□□□□ -0.22
EIF4A1-216ENST00000580888 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.68□□□□□ -0.22
EIF4A1-216ENST00000580888 PGPA6NDG6 321 aa13.68□□□□□ -0.22
EIF4A1-216ENST00000580888 BMPR1BO00238 502 aa13.68□□□□□ -0.22
EIF4A1-216ENST00000580888 PPP1R2P9O14990 202 aa13.68□□□□□ -0.22
EIF4A1-216ENST00000580888 IGHG4P01861 327 aa13.68□□□□□ -0.22
EIF4A1-216ENST00000580888 PDE6HQ13956 83 aa13.68□□□□□ -0.22
EIF4A1-216ENST00000580888 C5orf17Q8NAS9 161 aa13.68□□□□□ -0.22
EIF4A1-216ENST00000580888 NPFFR1Q9GZQ6 430 aa13.68□□□□□ -0.22
EIF4A1-216ENST00000580888 Q9H3A6 140 aa13.68□□□□□ -0.22
EIF4A1-216ENST00000580888 TRBV24-1A0A075B6N3 115 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 PGPEP1LA6NFU8 196 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 K7EN84 100 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 GCGP01275 180 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 S100A9P06702 114 aaKnown RBP13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 RAB5AP20339 215 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 RAB9AP51151 201 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 RELQ04864 619 aaPredicted RBP13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 TMEM183BQ1AE95 376 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 Q8N2B8 174 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 OR4F17Q8NGA8 305 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 BLNKQ8WV28 456 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 IMMP2LQ96T52 175 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 NOTCH3Q9UM47 2321 aa13.67□□□□□ -0.22
EIF4A1-216ENST00000580888 TRBV6-1A0A0K0K1D8 114 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 H7BYZ3 331 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 RPL7P18124 248 aaKnown RBP13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 GNG4P50150 75 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 TPPP2P59282 170 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 CENPWQ5EE01 88 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 TEX38Q6PEX7 206 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 SIGLEC15Q6ZMC9 328 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 C1QL4Q86Z23 238 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 ARL6IP6Q8N6S5 226 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 SMIM12Q96EX1 92 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 SFRP2Q96HF1 295 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 KLK15Q9H2R5 256 aa13.66□□□□□ -0.22
EIF4A1-216ENST00000580888 A0A0G2JLM5 398 aa13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 LOC105371267A0A1B0GV96 52 aa13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 ZNF253O75346 499 aa13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 SLC25A5P05141 298 aaKnown RBP13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 CXCL1P09341 107 aa13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 PSMB8P28062 276 aa13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 CNN1P51911 297 aaKnown RBP13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 KLHDC1Q8N7A1 406 aa13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 C17orf77Q96MU5 243 aa13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 ATG101Q9BSB4 218 aa13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 PRSS22Q9GZN4 317 aa13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 ZNF702PQ9H963 129 aa13.65□□□□□ -0.22
EIF4A1-216ENST00000580888 A0A087X0K7 114 aa13.64□□□□□ -0.23
EIF4A1-216ENST00000580888 BUB3O43684 328 aa13.64□□□□□ -0.23
EIF4A1-216ENST00000580888 TCRAP04437 139 aa13.64□□□□□ -0.23
EIF4A1-216ENST00000580888 ATF4P18848 351 aaPredicted RBP13.64□□□□□ -0.23
EIF4A1-216ENST00000580888 FAM209BQ5JX69 171 aa13.64□□□□□ -0.23
EIF4A1-216ENST00000580888 C1orf194Q5T5A4 169 aa13.64□□□□□ -0.23
EIF4A1-216ENST00000580888 WIPF2Q8TF74 440 aaPredicted RBP13.64□□□□□ -0.23
EIF4A1-216ENST00000580888 SERTAD4Q9NUC0 356 aa13.64□□□□□ -0.23
EIF4A1-216ENST00000580888 SMAD5-AS1Q9Y6J3 95 aa13.64□□□□□ -0.23
EIF4A1-216ENST00000580888 GGCTO75223 188 aaKnown RBP13.63□□□□□ -0.23
EIF4A1-216ENST00000580888 SNRPCP09234 159 aaKnown RBP13.63□□□□□ -0.23
EIF4A1-216ENST00000580888 GNG5P63218 68 aa13.63□□□□□ -0.23
EIF4A1-216ENST00000580888 OR10G8Q8NGN5 311 aa13.63□□□□□ -0.23
EIF4A1-216ENST00000580888 MYOZ3Q8TDC0 251 aa13.63□□□□□ -0.23
EIF4A1-216ENST00000580888 LINC00479Q96M42 142 aa13.63□□□□□ -0.23
EIF4A1-216ENST00000580888 GPR82Q96P67 336 aa13.63□□□□□ -0.23
EIF4A1-216ENST00000580888 MLST8Q9BVC4 326 aa13.63□□□□□ -0.23
EIF4A1-216ENST00000580888 OSTCQ9NRP0 149 aa13.63□□□□□ -0.23
EIF4A1-216ENST00000580888 AURKAIP1Q9NWT8 199 aaPredicted RBP13.63□□□□□ -0.23
EIF4A1-216ENST00000580888 TGIF2-C20orf24A0A0A6YYL0 155 aa13.62□□□□□ -0.23
EIF4A1-216ENST00000580888 H3BTX0 84 aa13.62□□□□□ -0.23
EIF4A1-216ENST00000580888 NDUFA4O00483 81 aa13.62□□□□□ -0.23
EIF4A1-216ENST00000580888 ISLRO14498 428 aa13.62□□□□□ -0.23
EIF4A1-216ENST00000580888 PF4V1P10720 104 aa13.62□□□□□ -0.23
EIF4A1-216ENST00000580888 ARL3P36405 182 aa13.62□□□□□ -0.23
EIF4A1-216ENST00000580888 GALR1P47211 349 aa13.62□□□□□ -0.23
EIF4A1-216ENST00000580888 FLI1Q01543 452 aaPredicted RBP13.62□□□□□ -0.23
EIF4A1-216ENST00000580888 RNF152Q8N8N0 203 aa13.62□□□□□ -0.23
EIF4A1-216ENST00000580888 PPP5D1E7EU14 171 aa13.61□□□□□ -0.23
EIF4A1-216ENST00000580888 SLC17A3O00476 420 aa13.61□□□□□ -0.23
EIF4A1-216ENST00000580888 FAM231DQ6ZW35 169 aa13.61□□□□□ -0.23
EIF4A1-216ENST00000580888 EXOC3-AS1Q8N2X6 119 aa13.61□□□□□ -0.23
EIF4A1-216ENST00000580888 FMC1Q96HJ9 113 aa13.61□□□□□ -0.23
EIF4A1-216ENST00000580888 OR5B12Q96R08 314 aa13.61□□□□□ -0.23
EIF4A1-216ENST00000580888 GNB4Q9HAV0 340 aa13.61□□□□□ -0.23
EIF4A1-216ENST00000580888 URGCP-MRPS24S4R325 110 aa13.61□□□□□ -0.23
EIF4A1-216ENST00000580888 LTAP01374 205 aa13.6□□□□□ -0.23
EIF4A1-216ENST00000580888 IGLV2-11P01706 119 aa13.6□□□□□ -0.23
EIF4A1-216ENST00000580888 TRBV12-3P01733 135 aa13.6□□□□□ -0.23
EIF4A1-216ENST00000580888 TYMSP04818 313 aa13.6□□□□□ -0.23
EIF4A1-216ENST00000580888 PSG9Q00887 426 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms