RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 TRAV12-3A0A0B4J271 114 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 DMRTC2Q8IXT2 367 aaPredicted RBP8.72□□□□□ -1.01
SEC22B-201ENST00000578049 PI4KAP42356 2102 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 DSCR9P59020 149 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 ZNF415Q09FC8 603 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 WIPF2Q8TF74 440 aaPredicted RBP8.72□□□□□ -1.01
SEC22B-201ENST00000578049 KLHDC3Q9BQ90 382 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 BUB1B-PAK6H3BSN5 160 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 MALP21145 153 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 POU2AF1Q16633 256 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 ZNF672Q499Z4 452 aaPredicted RBP8.72□□□□□ -1.01
SEC22B-201ENST00000578049 ARMS2P0C7Q2 107 aa8.71□□□□□ -1.01
SEC22B-201ENST00000578049 CFHR2P36980 270 aa8.71□□□□□ -1.01
SEC22B-201ENST00000578049 VMO1Q7Z5L0 202 aa8.71□□□□□ -1.01
SEC22B-201ENST00000578049 VOPP1Q96AW1 172 aa8.71□□□□□ -1.01
SEC22B-201ENST00000578049 PRTN3P24158 256 aa8.71□□□□□ -1.01
SEC22B-201ENST00000578049 CDKN1AP38936 164 aa8.71□□□□□ -1.01
SEC22B-201ENST00000578049 BMPERQ8N8U9 685 aa8.71□□□□□ -1.01
SEC22B-201ENST00000578049 Q8NFD4 153 aa8.71□□□□□ -1.01
SEC22B-201ENST00000578049 NDUFA4L2Q9NRX3 87 aa8.71□□□□□ -1.01
SEC22B-201ENST00000578049 KIR2DL5BA0A0G2JN68 375 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 KIR2DL5BA0A0G2JPC4 375 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 RHODO00212 210 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 C20orf204Q6ZNR8 217 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 KIR2DL5AQ8N109 375 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 NAA38Q9BRA0 125 aaKnown RBP8.71□□□□□ -1.02
SEC22B-201ENST00000578049 CSTL1Q9H114 145 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 K7EP13 123 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 ZNF726P1Q15940 193 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 ARTNQ5T4W7 220 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 LINC00311Q8N616 119 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 TIMM21Q9BVV7 248 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 SRRM4A7MD48 611 aaKnown RBP8.71□□□□□ -1.02
SEC22B-201ENST00000578049 SELLP14151 372 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 TMEM155Q4W5P6 130 aa8.71□□□□□ -1.02
SEC22B-201ENST00000578049 PHLDA1Q8WV24 401 aaPredicted RBP8.71□□□□□ -1.02
SEC22B-201ENST00000578049 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.02
SEC22B-201ENST00000578049 METRNQ9UJH8 293 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 Q8TCH9 128 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 MED12Q93074 2177 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 POLEQ07864 2286 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 K7EMI3 77 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 LEPROTO15243 131 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 IGLV3-1P01715 115 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 TRBV19A0A075B6N1 114 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 TRGV4A0A0C4DH28 118 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 TFF1P04155 84 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 IGLL1P15814 213 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 EFNA4P52798 201 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 RPL15P61313 204 aaKnown RBP8.7□□□□□ -1.02
SEC22B-201ENST00000578049 ACACAQ13085 2346 aa8.7□□□□□ -1.02
SEC22B-201ENST00000578049 IGHV3OR16-10A0A075B7F0 116 aa8.69□□□□□ -1.02
SEC22B-201ENST00000578049 A0A1W2PPI3 338 aa8.69□□□□□ -1.02
SEC22B-201ENST00000578049 LINC00158P58513 81 aa8.69□□□□□ -1.02
SEC22B-201ENST00000578049 TRPT1Q86TN4 253 aaKnown RBP8.69□□□□□ -1.02
SEC22B-201ENST00000578049 PRADC1Q9BSG0 188 aa8.69□□□□□ -1.02
SEC22B-201ENST00000578049 SRSF2Q01130 221 aaKnown RBP8.69□□□□□ -1.02
SEC22B-201ENST00000578049 ZNF474Q6S9Z5 364 aaPredicted RBP8.69□□□□□ -1.02
SEC22B-201ENST00000578049 IL17RELQ6ZVW7 336 aa8.69□□□□□ -1.02
SEC22B-201ENST00000578049 GLMPQ8WWB7 406 aa8.69□□□□□ -1.02
SEC22B-201ENST00000578049 SPAG8Q99932 426 aaPredicted RBP8.69□□□□□ -1.02
SEC22B-201ENST00000578049 SPTAN1Q13813 2472 aaKnown RBP8.69□□□□□ -1.02
SEC22B-201ENST00000578049 RCHY1Q96PM5 261 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 CHCHD5Q9BSY4 110 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 C9JAW5 83 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 SPACA3Q8IXA5 215 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 UTF1Q5T230 341 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 C2orf66Q6UXQ4 117 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 JPT2Q9H910 190 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 PLXNA3P51805 1871 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 IGKV1-39P01597 117 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 IGKV1D-39P04432 117 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 NPSP0C0P6 89 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 KLF5Q13887 457 aaPredicted RBP8.68□□□□□ -1.02
SEC22B-201ENST00000578049 C14orf178Q8N769 122 aaPredicted RBP8.68□□□□□ -1.02
SEC22B-201ENST00000578049 ZNF581Q9P0T4 197 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 LSM4Q9Y4Z0 139 aaKnown RBP8.68□□□□□ -1.02
SEC22B-201ENST00000578049 C1QTNF4Q9BXJ3 329 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 CACNA1HO95180 2353 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 SBF1O95248 1867 aa8.68□□□□□ -1.02
SEC22B-201ENST00000578049 CASP8AP2Q9UKL3 1982 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 PMVKQ15126 192 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 STPG4Q8N801 248 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 Q8TAT8 98 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 KIAA2026Q5HYC2 2103 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 CACNA1GO43497 2377 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 TRAV40A0A0B4J280 105 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 K7EM74 188 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 IGKV1-16P04430 117 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 VWC2Q2TAL6 325 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 ZNF833PQ6ZTB9 187 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 ZSWIM8A7E2V4 1837 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 A0A1W2PPM0 123 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 H3BMM0 161 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 PRR20EP86478 221 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 PRR20CP86479 221 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 PRR20DP86480 221 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 PRR20BP86481 221 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 PRR20AP86496 221 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 FAM110DQ8TAY7 271 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms