RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 TFPI2P48307 235 aa12.43□□□□□ -0.42
CLN6-208ENST00000567060 TMEM41BQ5BJD5 291 aa12.43□□□□□ -0.42
CLN6-208ENST00000567060 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.43□□□□□ -0.42
CLN6-208ENST00000567060 PQLC2Q6ZP29 291 aa12.43□□□□□ -0.42
CLN6-208ENST00000567060 SLC51BQ86UW2 128 aa12.43□□□□□ -0.42
CLN6-208ENST00000567060 WFDC3Q8IUB2 231 aa12.43□□□□□ -0.42
CLN6-208ENST00000567060 BAP18Q8IXM2 172 aa12.43□□□□□ -0.42
CLN6-208ENST00000567060 MAP6D1Q9H9H5 199 aa12.43□□□□□ -0.42
CLN6-208ENST00000567060 CDC34P49427 236 aaPredicted RBP12.42□□□□□ -0.42
CLN6-208ENST00000567060 AKR1C8PQ5T2L2 129 aa12.42□□□□□ -0.42
CLN6-208ENST00000567060 MORN5Q5VZ52 161 aa12.42□□□□□ -0.42
CLN6-208ENST00000567060 SPATA31B1PQ5VZV4 182 aa12.42□□□□□ -0.42
CLN6-208ENST00000567060 C9orf62Q8N4C0 152 aa12.42□□□□□ -0.42
CLN6-208ENST00000567060 FAM167A-AS1Q96KT0 104 aa12.42□□□□□ -0.42
CLN6-208ENST00000567060 C16orf92Q96LL3 132 aa12.42□□□□□ -0.42
CLN6-208ENST00000567060 ACTR3CQ9C0K3 210 aaPredicted RBP12.42□□□□□ -0.42
CLN6-208ENST00000567060 SH3BGRL3Q9H299 93 aa12.42□□□□□ -0.42
CLN6-208ENST00000567060 C3orf84H3BNL1 204 aa12.41□□□□□ -0.42
CLN6-208ENST00000567060 IGHV4-30-4P0DP06 118 aa12.41□□□□□ -0.42
CLN6-208ENST00000567060 RAB2AP61019 212 aa12.41□□□□□ -0.42
CLN6-208ENST00000567060 CD300CQ08708 224 aa12.41□□□□□ -0.42
CLN6-208ENST00000567060 MIR17HGQ75NE6 70 aa12.41□□□□□ -0.42
CLN6-208ENST00000567060 SLC25A2Q9BXI2 301 aa12.41□□□□□ -0.42
CLN6-208ENST00000567060 OR51M1Q9H341 326 aa12.41□□□□□ -0.42
CLN6-208ENST00000567060 TUBA4BQ9H853 241 aa12.41□□□□□ -0.42
CLN6-208ENST00000567060 TRAV5A0A0B4J249 113 aa12.4□□□□□ -0.42
CLN6-208ENST00000567060 ZNF688P0C7X2 276 aa12.4□□□□□ -0.42
CLN6-208ENST00000567060 DEFB131AP59861 70 aa12.4□□□□□ -0.42
CLN6-208ENST00000567060 PSG9Q00887 426 aa12.4□□□□□ -0.42
CLN6-208ENST00000567060 DPPA3Q6W0C5 159 aa12.4□□□□□ -0.42
CLN6-208ENST00000567060 RPP25LQ8N5L8 163 aaKnown RBP12.4□□□□□ -0.42
CLN6-208ENST00000567060 LRRC20Q8TCA0 184 aa12.4□□□□□ -0.42
CLN6-208ENST00000567060 PAXXQ9BUH6 204 aa12.4□□□□□ -0.42
CLN6-208ENST00000567060 RPRMQ9NS64 109 aa12.4□□□□□ -0.42
CLN6-208ENST00000567060 CSMD3Q7Z407 3707 aa12.39□□□□□ -0.43
CLN6-208ENST00000567060 OR7C2O60412 319 aa12.39□□□□□ -0.43
CLN6-208ENST00000567060 STAG3L2P0CL84 134 aa12.39□□□□□ -0.43
CLN6-208ENST00000567060 STAG3L3P0CL85 134 aa12.39□□□□□ -0.43
CLN6-208ENST00000567060 RAB5CP51148 216 aa12.39□□□□□ -0.43
CLN6-208ENST00000567060 FAM122CQ6P4D5 195 aa12.39□□□□□ -0.43
CLN6-208ENST00000567060 LYPD1Q8N2G4 141 aa12.39□□□□□ -0.43
CLN6-208ENST00000567060 C17orf77Q96MU5 243 aa12.39□□□□□ -0.43
CLN6-208ENST00000567060 SRD5A3Q9H8P0 318 aa12.39□□□□□ -0.43
CLN6-208ENST00000567060 ZNF331Q9NQX6 463 aaPredicted RBP12.39□□□□□ -0.43
CLN6-208ENST00000567060 UBQLN2Q9UHD9 624 aa12.39□□□□□ -0.43
CLN6-208ENST00000567060 STARD9Q9P2P6 4700 aa12.39□□□□□ -0.43
CLN6-208ENST00000567060 TRBV19A0A075B6N1 114 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 CTXND1A0A1B0GTU2 59 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 NBEAP1P0C6P0 100 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 PSMG4Q5JS54 123 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 FOXI2Q6ZQN5 318 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 FAM24BQ8N5W8 94 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 DEFB125Q8N687 156 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 RNF141Q8WVD5 230 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 RAB24Q969Q5 203 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 SAT2Q96F10 170 aaPredicted RBP12.38□□□□□ -0.43
CLN6-208ENST00000567060 CLUHP3Q96NS8 147 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 PRELID1Q9Y255 219 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 RFNGQ9Y644 331 aa12.38□□□□□ -0.43
CLN6-208ENST00000567060 KIR2DL5BA0A0G2JN68 375 aa12.37□□□□□ -0.43
CLN6-208ENST00000567060 KIR2DL5BA0A0G2JPC4 375 aa12.37□□□□□ -0.43
CLN6-208ENST00000567060 H3BQ15 152 aa12.37□□□□□ -0.43
CLN6-208ENST00000567060 LINC00322Q6ZN03 302 aaPredicted RBP12.37□□□□□ -0.43
CLN6-208ENST00000567060 KIR2DL5AQ8N109 375 aa12.37□□□□□ -0.43
CLN6-208ENST00000567060 KIR2DL5BQ8NHK3 375 aa12.37□□□□□ -0.43
CLN6-208ENST00000567060 FXYD5Q96DB9 178 aa12.37□□□□□ -0.43
CLN6-208ENST00000567060 MRPL53Q96EL3 112 aaKnown RBP12.37□□□□□ -0.43
CLN6-208ENST00000567060 PHYHIPLQ96FC7 376 aa12.37□□□□□ -0.43
CLN6-208ENST00000567060 ZNF586Q9NXT0 402 aa12.37□□□□□ -0.43
CLN6-208ENST00000567060 HYDINQ4G0P3 5121 aa12.36□□□□□ -0.43
CLN6-208ENST00000567060 LOC102724200A0A096LPH7 203 aaPredicted RBP12.36□□□□□ -0.43
CLN6-208ENST00000567060 CXorf1O96002 111 aa12.36□□□□□ -0.43
CLN6-208ENST00000567060 FRMD6-AS1P0C7T7 363 aa12.36□□□□□ -0.43
CLN6-208ENST00000567060 UBE2L3P68036 154 aaKnown RBP12.36□□□□□ -0.43
CLN6-208ENST00000567060 PSG3Q16557 428 aa12.36□□□□□ -0.43
CLN6-208ENST00000567060 CASC10Q5T4H9 136 aa12.36□□□□□ -0.43
CLN6-208ENST00000567060 LINC00052Q96N35 136 aa12.36□□□□□ -0.43
CLN6-208ENST00000567060 ASCL2Q99929 193 aa12.36□□□□□ -0.43
CLN6-208ENST00000567060 AAMDCQ9H7C9 122 aa12.36□□□□□ -0.43
CLN6-208ENST00000567060 TMEM167BQ9NRX6 74 aa12.36□□□□□ -0.43
CLN6-208ENST00000567060 TRAV8-2A0A0B4J237 113 aa12.35□□□□□ -0.43
CLN6-208ENST00000567060 UBE2CO00762 179 aa12.35□□□□□ -0.43
CLN6-208ENST00000567060 PYYP10082 97 aa12.35□□□□□ -0.43
CLN6-208ENST00000567060 APOC4P55056 127 aa12.35□□□□□ -0.43
CLN6-208ENST00000567060 EBLN2Q6P2I7 272 aa12.35□□□□□ -0.43
CLN6-208ENST00000567060 APRG1Q8IVJ8 170 aa12.35□□□□□ -0.43
CLN6-208ENST00000567060 STHQ8IWL8 128 aa12.35□□□□□ -0.43
CLN6-208ENST00000567060 ARL6IP6Q8N6S5 226 aa12.35□□□□□ -0.43
CLN6-208ENST00000567060 SUN5Q8TC36 379 aa12.35□□□□□ -0.43
CLN6-208ENST00000567060 ZNF503Q96F45 646 aa12.35□□□□□ -0.43
CLN6-208ENST00000567060 WFDC10AQ9H1F0 79 aa12.35□□□□□ -0.43
CLN6-208ENST00000567060 SAV1Q9H4B6 383 aaPredicted RBP12.35□□□□□ -0.43
CLN6-208ENST00000567060 HLA-DRB4P13762 266 aa12.34□□□□□ -0.43
CLN6-208ENST00000567060 MORN3Q6PF18 240 aaPredicted RBP12.34□□□□□ -0.43
CLN6-208ENST00000567060 TMED6Q8WW62 240 aa12.34□□□□□ -0.43
CLN6-208ENST00000567060 CITED4Q96RK1 184 aa12.34□□□□□ -0.43
CLN6-208ENST00000567060 HLA-DRB4X5D2U9 266 aa12.34□□□□□ -0.43
CLN6-208ENST00000567060 DUSP14O95147 198 aaKnown RBP12.33□□□□□ -0.44
CLN6-208ENST00000567060 NDUFB4O95168 129 aa12.33□□□□□ -0.44
CLN6-208ENST00000567060 OR10J4P0C629 311 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms