RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 TMEM177Q53S58 311 aa11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 ASPHD1Q5U4P2 390 aa11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 C10orf113Q5VZT2 155 aa11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 PDPNQ86YL7 162 aa11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 OR5AN1Q8NGI8 311 aa11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 PIFOQ8TCI5 191 aa11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 TMEM190Q8WZ59 177 aa11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 NAA38Q9BRA0 125 aaKnown RBP11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 HIGD1BQ9P298 99 aa11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 PKDREJQ9NTG1 2253 aa11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 TRAV5A0A0B4J249 113 aa11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 NCR2O95944 276 aa11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 CD3EP07766 207 aa11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 CCDC144NLQ6NUI1 221 aa11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 OR9G1Q8NH87 305 aa11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 WFDC12Q8WWY7 111 aa11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 HINT2Q9BX68 163 aa11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 KAAG1Q9UBP8 84 aa11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 POLEQ07864 2286 aa11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 SLC25A5P05141 298 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 PYYP10082 97 aa11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 LOXP28300 417 aaPredicted RBP11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 ZNF137PP52743 207 aa11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 SPANXB1Q9NS25 103 aaPredicted RBP11.12□□□□□ -0.63
RABGGTA-220ENST00000560998 B9A039 149 aa11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 DLL1O00548 723 aa11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 SAA1P0DJI8 122 aaPredicted RBP11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 CD24P25063 80 aa11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 ZNF138P52744 262 aa11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 DLX6P56179 175 aa11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 RIGQ13278 110 aa11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 MORN5Q5VZ52 161 aa11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 OSR1Q8TAX0 266 aaPredicted RBP11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 INSIG2Q9Y5U4 225 aa11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 TNCP24821 2201 aa11.11□□□□□ -0.63
RABGGTA-220ENST00000560998 MOSP00540 346 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 PLAUP00749 431 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 RNASE2P10153 161 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 MC5RP33032 325 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 UCNP55089 124 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 MOB3BQ86TA1 216 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 LINC00311Q8N616 119 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 PRSS3P2Q8NHM4 247 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 RAXQ9Y2V3 346 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 ADGRG4Q8IZF6 3080 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 GNG5P63218 68 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 FBXL19-AS1Q494R0 122 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 TMEM155Q4W5P6 130 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 OR10X1Q8NGY0 326 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 LINC01560Q8TB33 94 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 HARBI1Q96MB7 349 aa11.1□□□□□ -0.63
RABGGTA-220ENST00000560998 KALRNO60229 2985 aa11.09□□□□□ -0.63
RABGGTA-220ENST00000560998 A0A1B0GUT8 65 aa11.09□□□□□ -0.63
RABGGTA-220ENST00000560998 FAM90A27PA6NNH2 459 aa11.09□□□□□ -0.63
RABGGTA-220ENST00000560998 INS-IGF2F8WCM5 200 aa11.09□□□□□ -0.63
RABGGTA-220ENST00000560998 CSN3P07498 182 aa11.09□□□□□ -0.63
RABGGTA-220ENST00000560998 FSTL3O95633 263 aa11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 FCGR2BP31994 310 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 Q6AWC8 147 aa11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 LINC00322Q6ZN03 302 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 SMG1Q96Q15 3661 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 TRAV26-1A0A087WT03 109 aa11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 TCRBV4S1A1TA0A5B7 111 aa11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 K7EQM0 130 aa11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 GRNP28799 593 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 CRYBA4P53673 196 aa11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 DIAPH2-AS1Q14236 149 aa11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 OR8A1Q8NGG7 326 aa11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 ZNF502Q8TBZ5 544 aa11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 FLYWCH2Q96CP2 140 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 TIMM8BQ9Y5J9 83 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-220ENST00000560998 TRBV6-1A0A0K0K1D8 114 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 A0A1W2PRD5 423 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 A0A1W2PRF3 423 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 A0A1W2PRM7 423 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 PGPA6NDG6 321 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 C22orf46C9J442 243 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 CCL21O00585 134 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 COL8A1P27658 744 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 THAP8Q8NA92 274 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 ZNF414Q96IQ9 312 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 MRPL16Q9NX20 251 aaKnown RBP11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 A6NJY4 79 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 IGHV1-8P0DP01 117 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 CACNG7P62955 275 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 KLRB1Q12918 225 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 PATE2Q6UY27 113 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 OR4C13Q8NGP0 309 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 TMEM167AQ8TBQ9 72 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 PHLDA1Q8WV24 401 aaPredicted RBP11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 NDUFA4L2Q9NRX3 87 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 SELENOKQ9Y6D0 94 aa11.07□□□□□ -0.64
RABGGTA-220ENST00000560998 IGF2RP11717 2491 aa11.06□□□□□ -0.64
RABGGTA-220ENST00000560998 A0A096LNJ9 63 aa11.06□□□□□ -0.64
RABGGTA-220ENST00000560998 E9PLD3 99 aa11.06□□□□□ -0.64
RABGGTA-220ENST00000560998 HBDP02042 147 aa11.06□□□□□ -0.64
RABGGTA-220ENST00000560998 TCRAP04437 139 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms