RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 SCP2D1Q9UJQ7 156 aa8.46□□□□□ -1.06
SNX6-209ENST00000557265 HIGD1AQ9Y241 93 aa8.46□□□□□ -1.06
SNX6-209ENST00000557265 MYCBP2O75592 4640 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 WRBO00258 174 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 CTDSP2O14595 271 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 EREGO14944 169 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 HYPMO75409 117 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 MED6O75586 246 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 IL5P05113 134 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 RAP2BP61225 183 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 ACOT7LQ6ZUV0 252 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 CCDC28AQ8IWP9 274 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 FRZBQ92765 325 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 CIB3Q96Q77 187 aaPredicted RBP8.45□□□□□ -1.06
SNX6-209ENST00000557265 MCUBQ9NWR8 336 aa8.45□□□□□ -1.06
SNX6-209ENST00000557265 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
SNX6-209ENST00000557265 FLG2Q5D862 2391 aaPredicted RBP8.44□□□□□ -1.06
SNX6-209ENST00000557265 ANKRD20A5PA0PJZ0 165 aa8.44□□□□□ -1.06
SNX6-209ENST00000557265 CTDSPLO15194 276 aa8.44□□□□□ -1.06
SNX6-209ENST00000557265 SYNGR2O43760 224 aa8.44□□□□□ -1.06
SNX6-209ENST00000557265 OR5G3P0C626 314 aa8.44□□□□□ -1.06
SNX6-209ENST00000557265 SPANXN5Q5MJ07 72 aa8.44□□□□□ -1.06
SNX6-209ENST00000557265 CDPF1Q6NVV7 123 aa8.44□□□□□ -1.06
SNX6-209ENST00000557265 CYP2G1PQ6ZSU1 146 aa8.44□□□□□ -1.06
SNX6-209ENST00000557265 PARD6GQ9BYG4 376 aaPredicted RBP8.44□□□□□ -1.06
SNX6-209ENST00000557265 TMPRSS5Q9H3S3 457 aa8.44□□□□□ -1.06
SNX6-209ENST00000557265 A0A087X0K7 114 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 A0A096LPF7 62 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 PIGBOS1A0A0B4J2F0 54 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 DUXBA0A1W2PPF3 345 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 SMCO3A2RU48 225 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 SNURFLB1AK76 121 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 H3BP45 60 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 SLC25A6P12236 298 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 ERVFC1-1P60608 527 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 IL18Q14116 193 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 GFI1BQ5VTD9 330 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 DIRAS2Q96HU8 199 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 C20orf144Q9BQM9 153 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 TNFRSF18Q9Y5U5 241 aa8.43□□□□□ -1.06
SNX6-209ENST00000557265 PMS2P5A8MQ11 134 aa8.42□□□□□ -1.06
SNX6-209ENST00000557265 SIVA1O15304 175 aa8.42□□□□□ -1.06
SNX6-209ENST00000557265 IFNA5P01569 189 aa8.42□□□□□ -1.06
SNX6-209ENST00000557265 SMR3BP02814 79 aaPredicted RBP8.42□□□□□ -1.06
SNX6-209ENST00000557265 SNRPCP09234 159 aaKnown RBP8.42□□□□□ -1.06
SNX6-209ENST00000557265 LINC00869P0C866 280 aa8.42□□□□□ -1.06
SNX6-209ENST00000557265 ANXA7P20073 488 aaKnown RBP8.42□□□□□ -1.06
SNX6-209ENST00000557265 KRTAP10-1P60331 282 aa8.42□□□□□ -1.06
SNX6-209ENST00000557265 Q6ZTI0 123 aa8.42□□□□□ -1.06
SNX6-209ENST00000557265 TMED4Q7Z7H5 227 aa8.42□□□□□ -1.06
SNX6-209ENST00000557265 VSIG2Q96IQ7 327 aa8.42□□□□□ -1.06
SNX6-209ENST00000557265 MDFICQ9P1T7 246 aa8.42□□□□□ -1.06
SNX6-209ENST00000557265 STRAPQ9Y3F4 350 aaKnown RBP8.42□□□□□ -1.06
SNX6-209ENST00000557265 PRAC2D3DTV9 90 aa8.41□□□□□ -1.06
SNX6-209ENST00000557265 J3KRW8 73 aa8.41□□□□□ -1.06
SNX6-209ENST00000557265 MRPS12O15235 138 aaKnown RBP8.41□□□□□ -1.06
SNX6-209ENST00000557265 VAMP1P23763 118 aa8.41□□□□□ -1.06
SNX6-209ENST00000557265 PLP1P60201 277 aa8.41□□□□□ -1.06
SNX6-209ENST00000557265 DAZ2Q13117 558 aaKnown RBP8.41□□□□□ -1.06
SNX6-209ENST00000557265 TMEM128Q5BJH2 165 aa8.41□□□□□ -1.06
SNX6-209ENST00000557265 CCDC190Q86UF4 302 aa8.41□□□□□ -1.06
SNX6-209ENST00000557265 LRTM2Q8N967 370 aa8.41□□□□□ -1.06
SNX6-209ENST00000557265 RABL2BQ9UNT1 228 aa8.41□□□□□ -1.06
SNX6-209ENST00000557265 TRGV2A0A075B6R0 118 aa8.4□□□□□ -1.06
SNX6-209ENST00000557265 NXPH4O95158 308 aa8.4□□□□□ -1.06
SNX6-209ENST00000557265 DNAH10OSP0CZ25 163 aa8.4□□□□□ -1.06
SNX6-209ENST00000557265 CXCL2P19875 107 aa8.4□□□□□ -1.06
SNX6-209ENST00000557265 SELENOTP62341 195 aa8.4□□□□□ -1.06
SNX6-209ENST00000557265 ICAM4Q14773 271 aa8.4□□□□□ -1.06
SNX6-209ENST00000557265 PATE2Q6UY27 113 aa8.4□□□□□ -1.06
SNX6-209ENST00000557265 S100A7AQ86SG5 101 aa8.4□□□□□ -1.06
SNX6-209ENST00000557265 ARL6Q9H0F7 186 aa8.4□□□□□ -1.06
SNX6-209ENST00000557265 ARV1Q9H2C2 271 aa8.4□□□□□ -1.06
SNX6-209ENST00000557265 ZNF331Q9NQX6 463 aaPredicted RBP8.4□□□□□ -1.06
SNX6-209ENST00000557265 RABL2AQ9UBK7 228 aaPredicted RBP8.4□□□□□ -1.06
SNX6-209ENST00000557265 VPS13BQ7Z7G8 4022 aa8.39□□□□□ -1.07
SNX6-209ENST00000557265 A0A087WTM6 91 aa8.39□□□□□ -1.07
SNX6-209ENST00000557265 TRAV12-3A0A0B4J271 114 aa8.39□□□□□ -1.07
SNX6-209ENST00000557265 HOXB5P09067 269 aa8.39□□□□□ -1.07
SNX6-209ENST00000557265 LCN15Q6UWW0 184 aa8.39□□□□□ -1.07
SNX6-209ENST00000557265 NFE4Q86UQ8 179 aa8.39□□□□□ -1.07
SNX6-209ENST00000557265 C18orf15Q96N68 181 aa8.39□□□□□ -1.07
SNX6-209ENST00000557265 SLC50A1Q9BRV3 221 aa8.39□□□□□ -1.07
SNX6-209ENST00000557265 RSL24D1Q9UHA3 163 aaKnown RBP8.39□□□□□ -1.07
SNX6-209ENST00000557265 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
SNX6-209ENST00000557265 H3BTX0 84 aa8.38□□□□□ -1.07
SNX6-209ENST00000557265 CT45A10P0DMU9 189 aa8.38□□□□□ -1.07
SNX6-209ENST00000557265 RRAS2P62070 204 aaPredicted RBP8.38□□□□□ -1.07
SNX6-209ENST00000557265 POLR2GP62487 172 aaKnown RBP eCLIP8.38□□□□□ -1.07
SNX6-209ENST00000557265 SPCS2Q15005 226 aa8.38□□□□□ -1.07
SNX6-209ENST00000557265 ZNF431Q8TF32 576 aaPredicted RBP8.38□□□□□ -1.07
SNX6-209ENST00000557265 PYGO2Q9BRQ0 406 aa8.38□□□□□ -1.07
SNX6-209ENST00000557265 GSN-AS1Q9NRJ2 163 aa8.38□□□□□ -1.07
SNX6-209ENST00000557265 PSENENQ9NZ42 101 aa8.38□□□□□ -1.07
SNX6-209ENST00000557265 RNF24Q9Y225 148 aa8.38□□□□□ -1.07
SNX6-209ENST00000557265 TRGV1A0A0A0MS02 117 aa8.37□□□□□ -1.07
SNX6-209ENST00000557265 LINC00854A0A1B0GVQ3 168 aa8.37□□□□□ -1.07
SNX6-209ENST00000557265 SLC17A3O00476 420 aa8.37□□□□□ -1.07
SNX6-209ENST00000557265 CCNKO75909 580 aa8.37□□□□□ -1.07
SNX6-209ENST00000557265 SFT2D2O95562 160 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms