RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 DEFA6Q01524 100 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 FABP9Q0Z7S8 132 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 KLF5Q13887 457 aaPredicted RBP7.78□□□□□ -1.16
SRP54-208ENST00000555557 ZNF124Q15973 351 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 DLX4Q92988 240 aaPredicted RBP7.78□□□□□ -1.16
SRP54-208ENST00000555557 C17orf77Q96MU5 243 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 U3KQE9 123 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 FBN1P35555 2871 aaKnown RBP7.77□□□□□ -1.17
SRP54-208ENST00000555557 C9JQL5 133 aa7.77□□□□□ -1.17
SRP54-208ENST00000555557 MRPS12O15235 138 aaKnown RBP7.77□□□□□ -1.17
SRP54-208ENST00000555557 MT-ND4LP03901 98 aa7.77□□□□□ -1.17
SRP54-208ENST00000555557 PSMB3P49720 205 aa7.77□□□□□ -1.17
SRP54-208ENST00000555557 BPIFA4PQ86YQ2 179 aa7.77□□□□□ -1.17
SRP54-208ENST00000555557 ZNF586Q9NXT0 402 aa7.77□□□□□ -1.17
SRP54-208ENST00000555557 SMAD5-AS1Q9Y6J3 95 aa7.77□□□□□ -1.17
SRP54-208ENST00000555557 IGHV7-4-1A0A0J9YVY3 117 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 TMEM213A2RRL7 107 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 CST9LP1Q5W188 147 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 S100A7AQ86SG5 101 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 C1QL4Q86Z23 238 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 STXBP6Q8NFX7 210 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 RHPN1-AS1Q9BWJ2 59 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 TMEM167BQ9NRX6 74 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 UFC1Q9Y3C8 167 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 YTHDF2Q9Y5A9 579 aaKnown RBP7.76□□□□□ -1.17
SRP54-208ENST00000555557 WNK1Q9H4A3 2382 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 LOC102723971A0A1B0GUV8 181 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 K7EMT4 169 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 CHEK1O14757 476 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 NBEAP1P0C6P0 100 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 BCL2P10415 239 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 ATP5G3P48201 142 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 RANP62826 216 aaKnown RBP7.76□□□□□ -1.17
SRP54-208ENST00000555557 FHL3Q13643 280 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 ICAM4Q14773 271 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 REC114Q7Z4M0 266 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 TUBA4BQ9H853 241 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 TMEM14CQ9P0S9 112 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 SMPXQ9UHP9 88 aa7.76□□□□□ -1.17
SRP54-208ENST00000555557 IGKV3-7A0A075B6H7 116 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 LGALS9O00182 355 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 CD5P06127 495 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 IGLC2P0DOY2 106 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 PRB4P10163 310 aaPredicted RBP7.75□□□□□ -1.17
SRP54-208ENST00000555557 HIST1H1EP10412 219 aaKnown RBP7.75□□□□□ -1.17
SRP54-208ENST00000555557 RPL7P18124 248 aaKnown RBP7.75□□□□□ -1.17
SRP54-208ENST00000555557 PPT1P50897 306 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 ZNF506Q5JVG8 444 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 C16orf54Q6UWD8 224 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 ADAMTSL5Q6ZMM2 481 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 NDUFA11Q86Y39 141 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 OR4F17Q8NGA8 305 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 HIST1H2BAQ96A08 127 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 OR4F4Q96R69 305 aa7.75□□□□□ -1.17
SRP54-208ENST00000555557 TENM1Q9UKZ4 2725 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 C2orf70A6NJV1 201 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 A8MWP6 167 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 SLC17A3O00476 420 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 IFNA1P01562 189 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 CBLN1P23435 193 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 S100A7P31151 101 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 CD81P60033 236 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 PMS2P11Q13670 270 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 OR9G4Q8NGQ1 327 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 GLMPQ8WWB7 406 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 MDFIQ99750 246 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 CITED1Q99966 193 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 ELOVL1Q9BW60 279 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 MANBALQ9NQG1 85 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 VAX2Q9UIW0 290 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 TRBV19A0A075B6N1 114 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 A0A1W2PS18 150 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 ZNF785A8K8V0 405 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 C11orf94C9JXX5 98 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 NDUFB4O95168 129 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 CEBPGP53567 150 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 RPL11P62913 178 aaKnown RBP7.74□□□□□ -1.17
SRP54-208ENST00000555557 SUMO1P63165 101 aaKnown RBP7.74□□□□□ -1.17
SRP54-208ENST00000555557 C1orf194Q5T5A4 169 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 IGFL4Q6B9Z1 124 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 SIGLEC15Q6ZMC9 328 aa7.74□□□□□ -1.17
SRP54-208ENST00000555557 GGTLC3B5MD39 225 aa7.73□□□□□ -1.17
SRP54-208ENST00000555557 GALR1P47211 349 aa7.73□□□□□ -1.17
SRP54-208ENST00000555557 MEF2BQ02080 365 aaPredicted RBP7.73□□□□□ -1.17
SRP54-208ENST00000555557 EXOC3-AS1Q8N2X6 119 aa7.73□□□□□ -1.17
SRP54-208ENST00000555557 GRAMD2BQ96HH9 432 aa7.73□□□□□ -1.17
SRP54-208ENST00000555557 RNF24Q9Y225 148 aa7.73□□□□□ -1.17
SRP54-208ENST00000555557 A0A1W2PRE2 83 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 PGPA6NDG6 321 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 CSN3P07498 182 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 SRP19P09132 144 aaKnown RBP7.72□□□□□ -1.17
SRP54-208ENST00000555557 SFTA3P0C7M3 94 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 Q9H3A6 140 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 PEMTQ9UBM1 199 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 OVOL1O14753 267 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 HLA-DMBP28068 263 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 MYCNOSP40205 109 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 TAS2R60P59551 318 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 RAB4BP61018 213 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 291.2 ms