RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 LINC00322Q6ZN03 302 aaPredicted RBP1.55□□□□□ -2.16
LEMD3-206ENST00000545026 HYLS1Q96M11 299 aa1.55□□□□□ -2.16
LEMD3-206ENST00000545026 RNF11Q9Y3C5 154 aa1.55□□□□□ -2.16
LEMD3-206ENST00000545026 KIAA1549Q9HCM3 1950 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 PPP5D1E7EU14 171 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 RER1O15258 196 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 HIST1H2BKO60814 126 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 IFNA4P05014 189 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 HIST1H2BJP06899 126 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 PSG9Q00887 426 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 PHF5AQ7RTV0 110 aaKnown RBP1.54□□□□□ -2.16
LEMD3-206ENST00000545026 CARD19Q96LW7 228 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 MAP1LC3BQ9GZQ8 125 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 TMEM14CQ9P0S9 112 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 RFX7Q2KHR2 1363 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 SYNMO15061 1565 aa1.54□□□□□ -2.16
LEMD3-206ENST00000545026 IDO1P14902 403 aa1.53□□□□□ -2.16
LEMD3-206ENST00000545026 RTL8BQ17RB0 113 aa1.53□□□□□ -2.16
LEMD3-206ENST00000545026 TMEM14EPQ6UXP3 125 aa1.53□□□□□ -2.16
LEMD3-206ENST00000545026 FAM24BQ8N5W8 94 aa1.53□□□□□ -2.16
LEMD3-206ENST00000545026 YTHDC2Q9H6S0 1430 aaKnown RBP1.53□□□□□ -2.16
LEMD3-206ENST00000545026 NUP210LQ5VU65 1888 aa1.52□□□□□ -2.17
LEMD3-206ENST00000545026 CECR2Q9BXF3 1484 aa1.52□□□□□ -2.17
LEMD3-206ENST00000545026 TRAV27A0A087WT01 109 aa1.52□□□□□ -2.17
LEMD3-206ENST00000545026 OR2T8A6NH00 312 aa1.52□□□□□ -2.17
LEMD3-206ENST00000545026 F8W1H4 67 aa1.52□□□□□ -2.17
LEMD3-206ENST00000545026 KLF7O75840 302 aaPredicted RBP1.52□□□□□ -2.17
LEMD3-206ENST00000545026 NEFHP12036 1026 aa1.52□□□□□ -2.17
LEMD3-206ENST00000545026 HBBP68871 147 aa1.52□□□□□ -2.17
LEMD3-206ENST00000545026 ARPINQ7Z6K5 226 aa1.52□□□□□ -2.17
LEMD3-206ENST00000545026 OR5AS1Q8N127 324 aa1.52□□□□□ -2.17
LEMD3-206ENST00000545026 AMELYQ99218 206 aa1.52□□□□□ -2.17
LEMD3-206ENST00000545026 HEATR1Q9H583 2144 aaKnown RBP1.52□□□□□ -2.17
LEMD3-206ENST00000545026 PLXNA4Q9HCM2 1894 aa1.52□□□□□ -2.17
LEMD3-206ENST00000545026 FRMPD1Q5SYB0 1578 aa1.51□□□□□ -2.17
LEMD3-206ENST00000545026 NISCHQ9Y2I1 1504 aa1.51□□□□□ -2.17
LEMD3-206ENST00000545026 TEN1Q86WV5 123 aa1.51□□□□□ -2.17
LEMD3-206ENST00000545026 OR2H1Q9GZK4 316 aa1.51□□□□□ -2.17
LEMD3-206ENST00000545026 MYO5AQ9Y4I1 1855 aaKnown RBP1.51□□□□□ -2.17
LEMD3-206ENST00000545026 MYH2Q9UKX2 1941 aa1.5□□□□□ -2.17
LEMD3-206ENST00000545026 UNC13CQ8NB66 2214 aa1.5□□□□□ -2.17
LEMD3-206ENST00000545026 hDV103S1A0JD37 113 aa1.5□□□□□ -2.17
LEMD3-206ENST00000545026 COX7CP15954 63 aa1.5□□□□□ -2.17
LEMD3-206ENST00000545026 PRB3Q04118 309 aaPredicted RBP1.5□□□□□ -2.17
LEMD3-206ENST00000545026 ZNF431Q8TF32 576 aaPredicted RBP1.5□□□□□ -2.17
LEMD3-206ENST00000545026 PCBD2Q9H0N5 130 aa1.5□□□□□ -2.17
LEMD3-206ENST00000545026 OTORQ9NRC9 128 aa1.5□□□□□ -2.17
LEMD3-206ENST00000545026 MED11Q9P086 117 aa1.5□□□□□ -2.17
LEMD3-206ENST00000545026 COL1A1P02452 1464 aaPredicted RBP1.5□□□□□ -2.17
LEMD3-206ENST00000545026 E9PCH4 1651 aa1.49□□□□□ -2.17
LEMD3-206ENST00000545026 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.49□□□□□ -2.17
LEMD3-206ENST00000545026 GPR31O00270 319 aa1.49□□□□□ -2.17
LEMD3-206ENST00000545026 EIF3IQ13347 325 aaKnown RBP1.49□□□□□ -2.17
LEMD3-206ENST00000545026 DCUN1D2Q6PH85 259 aa1.49□□□□□ -2.17
LEMD3-206ENST00000545026 DYDC1Q8WWB3 177 aa1.49□□□□□ -2.17
LEMD3-206ENST00000545026 LAMTOR3Q9UHA4 124 aa1.49□□□□□ -2.17
LEMD3-206ENST00000545026 MAP1LC3B2A6NCE7 125 aa1.48□□□□□ -2.17
LEMD3-206ENST00000545026 H3BRM9 83 aa1.48□□□□□ -2.17
LEMD3-206ENST00000545026 CST7O76096 145 aa1.48□□□□□ -2.17
LEMD3-206ENST00000545026 RPL35P42766 123 aaKnown RBP1.48□□□□□ -2.17
LEMD3-206ENST00000545026 TMEM78Q5T7P6 136 aa1.48□□□□□ -2.17
LEMD3-206ENST00000545026 HAGHLQ6PII5 290 aaPredicted RBP1.48□□□□□ -2.17
LEMD3-206ENST00000545026 GKN2Q86XP6 184 aa1.48□□□□□ -2.17
LEMD3-206ENST00000545026 PRR15Q8IV56 129 aa1.48□□□□□ -2.17
LEMD3-206ENST00000545026 LRRC18Q8N456 261 aa1.48□□□□□ -2.17
LEMD3-206ENST00000545026 PLPP5Q8NEB5 264 aa1.48□□□□□ -2.17
LEMD3-206ENST00000545026 BORCS8Q96FH0 119 aa1.48□□□□□ -2.17
LEMD3-206ENST00000545026 ZC2HC1AQ96GY0 325 aa1.48□□□□□ -2.17
LEMD3-206ENST00000545026 NUBP2Q9Y5Y2 271 aa1.48□□□□□ -2.17
LEMD3-206ENST00000545026 CROCCP2Q86T23 111 aa1.47□□□□□ -2.17
LEMD3-206ENST00000545026 FAM216BQ8N7L0 139 aa1.47□□□□□ -2.17
LEMD3-206ENST00000545026 TECPR2O15040 1411 aa1.47□□□□□ -2.17
LEMD3-206ENST00000545026 N4BP2Q86UW6 1770 aaPredicted RBP1.47□□□□□ -2.17
LEMD3-206ENST00000545026 FREM3P0C091 2139 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 ALPK3Q96L96 1907 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 MGAMO43451 1857 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 C5orf67F2Z3F1 127 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 H3BQV1 296 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 NCR3O14931 201 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 FABP1P07148 127 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 VBP1P61758 197 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 TMEM138Q9NPI0 162 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 TNFSF18Q9UNG2 199 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 MYH3P11055 1940 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 PEAK1Q9H792 1746 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 RTL9Q8NET4 1388 aa1.46□□□□□ -2.18
LEMD3-206ENST00000545026 IGLV3-32A0A0A0MS00 114 aa1.45□□□□□ -2.18
LEMD3-206ENST00000545026 TRDV1A0A1B0GX56 115 aa1.45□□□□□ -2.18
LEMD3-206ENST00000545026 C9orf170A2RU37 121 aa1.45□□□□□ -2.18
LEMD3-206ENST00000545026 LYRM1O43325 122 aa1.45□□□□□ -2.18
LEMD3-206ENST00000545026 OR10AG1Q8NH19 301 aa1.45□□□□□ -2.18
LEMD3-206ENST00000545026 LRTM1Q9HBL6 345 aa1.45□□□□□ -2.18
LEMD3-206ENST00000545026 COL24A1Q17RW2 1714 aa1.45□□□□□ -2.18
LEMD3-206ENST00000545026 ADGBQ8N7X0 1667 aa1.45□□□□□ -2.18
LEMD3-206ENST00000545026 STX12Q86Y82 276 aa1.44□□□□□ -2.18
LEMD3-206ENST00000545026 NAT8BQ9UHF3 227 aa1.44□□□□□ -2.18
LEMD3-206ENST00000545026 SMPXQ9UHP9 88 aa1.44□□□□□ -2.18
LEMD3-206ENST00000545026 PIK3C2AO00443 1686 aa1.44□□□□□ -2.18
LEMD3-206ENST00000545026 MYLKQ15746 1914 aa1.43□□□□□ -2.18
LEMD3-206ENST00000545026 H7BYZ3 331 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms