RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 KIR2DL5AQ8N109 375 aa13.99□□□□□ -0.17
GNE-204ENST00000539208 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
GNE-204ENST00000539208 ZC2HC1AQ96GY0 325 aa13.99□□□□□ -0.17
GNE-204ENST00000539208 CD33P20138 364 aa13.98□□□□□ -0.17
GNE-204ENST00000539208 AMTP48728 403 aa13.98□□□□□ -0.17
GNE-204ENST00000539208 PAX8Q06710 450 aa13.98□□□□□ -0.17
GNE-204ENST00000539208 UNQ5815/PRO19632Q6UWF5 114 aa13.98□□□□□ -0.17
GNE-204ENST00000539208 ZNF502Q8TBZ5 544 aa13.98□□□□□ -0.17
GNE-204ENST00000539208 PGLYRP4Q96LB8 373 aa13.98□□□□□ -0.17
GNE-204ENST00000539208 TMUB1Q9BVT8 246 aa13.98□□□□□ -0.17
GNE-204ENST00000539208 NRN1Q9NPD7 142 aa13.98□□□□□ -0.17
GNE-204ENST00000539208 RABAC1Q9UI14 185 aa13.98□□□□□ -0.17
GNE-204ENST00000539208 IGHV3-23P01764 117 aa13.98□□□□□ -0.17
GNE-204ENST00000539208 OR2D3Q8NGH3 330 aa13.98□□□□□ -0.17
GNE-204ENST00000539208 SSBP4Q9BWG4 385 aaPredicted RBP13.98□□□□□ -0.17
GNE-204ENST00000539208 ATP6V0E1O15342 81 aa13.97□□□□□ -0.17
GNE-204ENST00000539208 TOMM20LQ6UXN7 152 aa13.97□□□□□ -0.17
GNE-204ENST00000539208 TMEM8BA6NDV4 472 aa13.96□□□□□ -0.17
GNE-204ENST00000539208 HAX1O00165 279 aa13.96□□□□□ -0.17
GNE-204ENST00000539208 CSN1S1P47710 185 aa13.96□□□□□ -0.17
GNE-204ENST00000539208 M0R3E3 92 aa13.96□□□□□ -0.18
GNE-204ENST00000539208 C15orf32Q32M92 178 aa13.96□□□□□ -0.18
GNE-204ENST00000539208 FBLL1A6NHQ2 334 aaKnown RBP13.95□□□□□ -0.18
GNE-204ENST00000539208 APOHP02749 345 aaPredicted RBP13.95□□□□□ -0.18
GNE-204ENST00000539208 PMCHP20382 165 aa13.95□□□□□ -0.18
GNE-204ENST00000539208 Q71RC1 249 aaPredicted RBP13.95□□□□□ -0.18
GNE-204ENST00000539208 COX8CQ7Z4L0 72 aa13.95□□□□□ -0.18
GNE-204ENST00000539208 RHOGP84095 191 aa13.95□□□□□ -0.18
GNE-204ENST00000539208 ECSCRQ19T08 205 aa13.95□□□□□ -0.18
GNE-204ENST00000539208 LBHQ53QV2 105 aaPredicted RBP13.95□□□□□ -0.18
GNE-204ENST00000539208 FAM162BQ5T6X4 162 aa13.95□□□□□ -0.18
GNE-204ENST00000539208 NIT1Q86X76 327 aa13.95□□□□□ -0.18
GNE-204ENST00000539208 C5orf56Q8N8D9 126 aa13.94□□□□□ -0.18
GNE-204ENST00000539208 PIMREGQ9BSJ6 248 aa13.94□□□□□ -0.18
GNE-204ENST00000539208 RNF114Q9Y508 228 aa13.94□□□□□ -0.18
GNE-204ENST00000539208 SH2D7A6NKC9 451 aaPredicted RBP13.93□□□□□ -0.18
GNE-204ENST00000539208 CRIP1P50238 77 aa13.93□□□□□ -0.18
GNE-204ENST00000539208 RAB9AP51151 201 aa13.93□□□□□ -0.18
GNE-204ENST00000539208 Q8N976 141 aa13.93□□□□□ -0.18
GNE-204ENST00000539208 C20orf144Q9BQM9 153 aa13.93□□□□□ -0.18
GNE-204ENST00000539208 SMAD5-AS1Q9Y6J3 95 aa13.93□□□□□ -0.18
GNE-204ENST00000539208 WNK2Q9Y3S1 2297 aa13.93□□□□□ -0.18
GNE-204ENST00000539208 NDUFS8O00217 210 aa13.93□□□□□ -0.18
GNE-204ENST00000539208 KRTDAPP60985 99 aa13.93□□□□□ -0.18
GNE-204ENST00000539208 CLEC3BP05452 202 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 GPR183P32249 361 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 Q6AWC8 147 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 GATD1Q8NB37 220 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 C10orf105Q8TEF2 133 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 NDFIP1Q9BT67 221 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 ZFAND3Q9H8U3 227 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 IGHV1-69DA0A0B4J2H0 117 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 A0A1B0GW15 77 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 IGHV1-69P01742 117 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 CT45A10P0DMU9 189 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 SAPCD1Q5SSQ6 148 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 FAM19A2Q8N3H0 131 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 CCL19Q99731 98 aa13.92□□□□□ -0.18
GNE-204ENST00000539208 A0A1B0GUT8 65 aa13.91□□□□□ -0.18
GNE-204ENST00000539208 CHEK1O14757 476 aa13.91□□□□□ -0.18
GNE-204ENST00000539208 HSBP1O75506 76 aa13.91□□□□□ -0.18
GNE-204ENST00000539208 ATP6V0BQ99437 205 aa13.91□□□□□ -0.18
GNE-204ENST00000539208 MOB4Q9Y3A3 225 aa13.91□□□□□ -0.18
GNE-204ENST00000539208 LOC102724200A0A096LPH7 203 aaPredicted RBP13.9□□□□□ -0.18
GNE-204ENST00000539208 TRBV7-1A0A0A6YYK4 115 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 LINC01548A6NM66 108 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 RIGQ13278 110 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 TDRG1Q3Y452 100 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 EEF1AKMT3Q96AZ1 226 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 BORCS7Q96B45 105 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 MEGF9Q9H1U4 602 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 A0A087X0K7 114 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 IGHV4-61A0A0C4DH41 118 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 G3V318 75 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 C3orf79P0CE67 100 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 CRIP2P52943 208 aaPredicted RBP13.9□□□□□ -0.18
GNE-204ENST00000539208 DMRTA1Q5VZB9 504 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 CCDC140Q96MF4 163 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 C8orf49Q96NF6 230 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 VAMP8Q9BV40 100 aa13.9□□□□□ -0.18
GNE-204ENST00000539208 IGHG4P01861 327 aa13.89□□□□□ -0.19
GNE-204ENST00000539208 NTF3P20783 257 aa13.89□□□□□ -0.19
GNE-204ENST00000539208 PIFOQ8TCI5 191 aa13.89□□□□□ -0.19
GNE-204ENST00000539208 C2orf88Q9BSF0 95 aa13.89□□□□□ -0.19
GNE-204ENST00000539208 BUB3O43684 328 aa13.89□□□□□ -0.19
GNE-204ENST00000539208 C19orf54Q5BKX5 351 aa13.89□□□□□ -0.19
GNE-204ENST00000539208 CHCHD1Q96BP2 118 aaKnown RBP13.89□□□□□ -0.19
GNE-204ENST00000539208 URB1-AS1Q96HZ7 61 aa13.89□□□□□ -0.19
GNE-204ENST00000539208 ASCL2Q99929 193 aa13.89□□□□□ -0.19
GNE-204ENST00000539208 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.88□□□□□ -0.19
GNE-204ENST00000539208 RNASEKQ6P5S7 137 aaKnown RBP13.88□□□□□ -0.19
GNE-204ENST00000539208 PRR25Q96S07 402 aa13.88□□□□□ -0.19
GNE-204ENST00000539208 M0R2Z0 102 aa13.88□□□□□ -0.19
GNE-204ENST00000539208 CYB5R2Q6BCY4 276 aa13.88□□□□□ -0.19
GNE-204ENST00000539208 PKD1L2Q7Z442 2459 aa13.87□□□□□ -0.19
GNE-204ENST00000539208 MED13LQ71F56 2210 aa13.87□□□□□ -0.19
GNE-204ENST00000539208 IGKV2-40A0A087WW87 121 aaPredicted RBP13.87□□□□□ -0.19
GNE-204ENST00000539208 CLPSL1A2RUU4 121 aa13.87□□□□□ -0.19
GNE-204ENST00000539208 IGKV2D-40P01614 121 aaPredicted RBP13.87□□□□□ -0.19
GNE-204ENST00000539208 ARMS2P0C7Q2 107 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 252 ms