RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 TRIM63Q969Q1 353 aa12.07□□□□□ -0.48
LTBR-206ENST00000536876 GNPNAT1Q96EK6 184 aaPredicted RBP12.07□□□□□ -0.48
LTBR-206ENST00000536876 ZNF503Q96F45 646 aa12.07□□□□□ -0.48
LTBR-206ENST00000536876 ZNF586Q9NXT0 402 aa12.07□□□□□ -0.48
LTBR-206ENST00000536876 H3BMQ9 156 aa12.06□□□□□ -0.48
LTBR-206ENST00000536876 INAFM2P0DMQ5 153 aa12.06□□□□□ -0.48
LTBR-206ENST00000536876 HTN1P15515 57 aa12.06□□□□□ -0.48
LTBR-206ENST00000536876 VAMP1P23763 118 aa12.06□□□□□ -0.48
LTBR-206ENST00000536876 CIB3Q96Q77 187 aaPredicted RBP12.06□□□□□ -0.48
LTBR-206ENST00000536876 SHANK2-AS3Q9BTD1 123 aa12.06□□□□□ -0.48
LTBR-206ENST00000536876 A0A087X0K7 114 aa12.05□□□□□ -0.48
LTBR-206ENST00000536876 NOL3O60936 208 aaKnown RBP12.05□□□□□ -0.48
LTBR-206ENST00000536876 SLC25A6P12236 298 aa12.05□□□□□ -0.48
LTBR-206ENST00000536876 M6PRP20645 277 aa12.05□□□□□ -0.48
LTBR-206ENST00000536876 OR5I1Q13606 314 aa12.05□□□□□ -0.48
LTBR-206ENST00000536876 ACOT7LQ6ZUV0 252 aa12.05□□□□□ -0.48
LTBR-206ENST00000536876 TMEM144Q7Z5S9 345 aa12.05□□□□□ -0.48
LTBR-206ENST00000536876 LYPD1Q8N2G4 141 aa12.05□□□□□ -0.48
LTBR-206ENST00000536876 LRTM2Q8N967 370 aa12.05□□□□□ -0.48
LTBR-206ENST00000536876 MCFD2Q8NI22 146 aa12.05□□□□□ -0.48
LTBR-206ENST00000536876 LRRC20Q8TCA0 184 aa12.05□□□□□ -0.48
LTBR-206ENST00000536876 PARD6GQ9BYG4 376 aaPredicted RBP12.05□□□□□ -0.48
LTBR-206ENST00000536876 MRPS12O15235 138 aaKnown RBP12.04□□□□□ -0.48
LTBR-206ENST00000536876 AP3S2P59780 193 aa12.04□□□□□ -0.48
LTBR-206ENST00000536876 AKR1C1Q04828 323 aa12.04□□□□□ -0.48
LTBR-206ENST00000536876 Q5VSD8 79 aa12.04□□□□□ -0.48
LTBR-206ENST00000536876 ZNF493Q6ZR52 646 aa12.04□□□□□ -0.48
LTBR-206ENST00000536876 TOMM5Q8N4H5 51 aa12.04□□□□□ -0.48
LTBR-206ENST00000536876 WRBO00258 174 aa12.03□□□□□ -0.48
LTBR-206ENST00000536876 SYNGR2O43760 224 aa12.03□□□□□ -0.48
LTBR-206ENST00000536876 RAP2BP61225 183 aa12.03□□□□□ -0.48
LTBR-206ENST00000536876 PPP1R1AQ13522 171 aa12.03□□□□□ -0.48
LTBR-206ENST00000536876 PSG3Q16557 428 aa12.03□□□□□ -0.48
LTBR-206ENST00000536876 PYDC2Q56P42 97 aa12.03□□□□□ -0.48
LTBR-206ENST00000536876 S100A7AQ86SG5 101 aa12.03□□□□□ -0.48
LTBR-206ENST00000536876 OR10J6PQ8NGY7 276 aa12.03□□□□□ -0.48
LTBR-206ENST00000536876 V9GYH0 126 aa12.03□□□□□ -0.48
LTBR-206ENST00000536876 H3BP45 60 aa12.02□□□□□ -0.49
LTBR-206ENST00000536876 ADAP1O75689 374 aa12.02□□□□□ -0.49
LTBR-206ENST00000536876 SFT2D2O95562 160 aa12.02□□□□□ -0.49
LTBR-206ENST00000536876 RPL7P18124 248 aaKnown RBP12.02□□□□□ -0.49
LTBR-206ENST00000536876 CDKN1BP46527 198 aa12.02□□□□□ -0.49
LTBR-206ENST00000536876 VSIG2Q96IQ7 327 aa12.02□□□□□ -0.49
LTBR-206ENST00000536876 TMPRSS5Q9H3S3 457 aa12.02□□□□□ -0.49
LTBR-206ENST00000536876 A0A096LPF7 62 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 GAGE12BA1L429 117 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 H3BNG1 76 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 H7BYZ3 331 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 GAGE7O76087 117 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 IL5P05113 134 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 HOXB5P09067 269 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 GAGE12FP0CL80 117 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 GAGE12GP0CL81 117 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 GAGE12IP0CL82 117 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 PLP1P60201 277 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 SPANXN5Q5MJ07 72 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 GFI1BQ5VTD9 330 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 CYP2G1PQ6ZSU1 146 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 SLC25A21Q9BQT8 299 aaPredicted RBP12.01□□□□□ -0.49
LTBR-206ENST00000536876 HIGD1AQ9Y241 93 aa12.01□□□□□ -0.49
LTBR-206ENST00000536876 SMCO3A2RU48 225 aa12□□□□□ -0.49
LTBR-206ENST00000536876 KRTAP10-1P60331 282 aa12□□□□□ -0.49
LTBR-206ENST00000536876 PATE2Q6UY27 113 aa12□□□□□ -0.49
LTBR-206ENST00000536876 RPUSD4Q96CM3 377 aaKnown RBP12□□□□□ -0.49
LTBR-206ENST00000536876 STRAPQ9Y3F4 350 aaKnown RBP12□□□□□ -0.49
LTBR-206ENST00000536876 PMS2P5A8MQ11 134 aa11.99□□□□□ -0.49
LTBR-206ENST00000536876 PRAC2D3DTV9 90 aa11.99□□□□□ -0.49
LTBR-206ENST00000536876 HYPMO75409 117 aa11.99□□□□□ -0.49
LTBR-206ENST00000536876 OR5G3P0C626 314 aa11.99□□□□□ -0.49
LTBR-206ENST00000536876 LINC00869P0C866 280 aa11.99□□□□□ -0.49
LTBR-206ENST00000536876 CCDC28AQ8IWP9 274 aa11.99□□□□□ -0.49
LTBR-206ENST00000536876 ZBTB8BQ8NAP8 495 aaPredicted RBP11.99□□□□□ -0.49
LTBR-206ENST00000536876 C20orf144Q9BQM9 153 aa11.99□□□□□ -0.49
LTBR-206ENST00000536876 RNF24Q9Y225 148 aa11.99□□□□□ -0.49
LTBR-206ENST00000536876 SLC17A3O00476 420 aa11.98□□□□□ -0.49
LTBR-206ENST00000536876 CCNKO75909 580 aa11.98□□□□□ -0.49
LTBR-206ENST00000536876 DNAH10OSP0CZ25 163 aa11.98□□□□□ -0.49
LTBR-206ENST00000536876 Q6ZTI0 123 aa11.98□□□□□ -0.49
LTBR-206ENST00000536876 DEDD2Q8WXF8 326 aa11.98□□□□□ -0.49
LTBR-206ENST00000536876 ZNF331Q9NQX6 463 aaPredicted RBP11.98□□□□□ -0.49
LTBR-206ENST00000536876 TNFRSF18Q9Y5U5 241 aa11.98□□□□□ -0.49
LTBR-206ENST00000536876 LINC00854A0A1B0GVQ3 168 aa11.97□□□□□ -0.49
LTBR-206ENST00000536876 RLN2P04090 185 aa11.97□□□□□ -0.49
LTBR-206ENST00000536876 SNRPCP09234 159 aaKnown RBP11.97□□□□□ -0.49
LTBR-206ENST00000536876 ANXA7P20073 488 aaKnown RBP11.97□□□□□ -0.49
LTBR-206ENST00000536876 SELENOTP62341 195 aa11.97□□□□□ -0.49
LTBR-206ENST00000536876 DNAH8Q96JB1 4490 aa11.97□□□□□ -0.49
LTBR-206ENST00000536876 POLR2GP62487 172 aaKnown RBP eCLIP11.96□□□□□ -0.49
LTBR-206ENST00000536876 CDPF1Q6NVV7 123 aa11.96□□□□□ -0.49
LTBR-206ENST00000536876 PGPEP1Q9NXJ5 209 aa11.96□□□□□ -0.49
LTBR-206ENST00000536876 SNURFLB1AK76 121 aa11.95□□□□□ -0.5
LTBR-206ENST00000536876 SSSCA1O60232 199 aa11.95□□□□□ -0.5
LTBR-206ENST00000536876 CXCL2P19875 107 aa11.95□□□□□ -0.5
LTBR-206ENST00000536876 MORN5Q5VZ52 161 aa11.95□□□□□ -0.5
LTBR-206ENST00000536876 C9orf170A2RU37 121 aa11.94□□□□□ -0.5
LTBR-206ENST00000536876 H3BTX0 84 aa11.94□□□□□ -0.5
LTBR-206ENST00000536876 K7EPK0 472 aa11.94□□□□□ -0.5
LTBR-206ENST00000536876 SIVA1O15304 175 aa11.94□□□□□ -0.5
LTBR-206ENST00000536876 S100A5P33763 92 aa11.94□□□□□ -0.5
LTBR-206ENST00000536876 UBE2MP61081 183 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms