RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 IZUMO1RA6ND01 250 aa18.61■□□□□ 0.57
LDLRAD3-203ENST00000528989 PSMB3P49720 205 aa18.61■□□□□ 0.57
LDLRAD3-203ENST00000528989 HAGHQ16775 308 aa18.61■□□□□ 0.57
LDLRAD3-203ENST00000528989 TMEM61Q8N0U2 210 aa18.61■□□□□ 0.57
LDLRAD3-203ENST00000528989 RARRES2Q99969 163 aa18.61■□□□□ 0.57
LDLRAD3-203ENST00000528989 PAGE4O60829 102 aa18.6■□□□□ 0.57
LDLRAD3-203ENST00000528989 CD33P20138 364 aa18.6■□□□□ 0.57
LDLRAD3-203ENST00000528989 WFDC3Q8IUB2 231 aa18.6■□□□□ 0.57
LDLRAD3-203ENST00000528989 HELTA6NFD8 242 aa18.6■□□□□ 0.57
LDLRAD3-203ENST00000528989 TFPI2P48307 235 aa18.6■□□□□ 0.57
LDLRAD3-203ENST00000528989 WFDC9Q8NEX5 89 aa18.6■□□□□ 0.57
LDLRAD3-203ENST00000528989 MS4A6AQ9H2W1 248 aa18.59■□□□□ 0.57
LDLRAD3-203ENST00000528989 EXOC3-AS1Q8N2X6 119 aa18.58■□□□□ 0.57
LDLRAD3-203ENST00000528989 NRN1Q9NPD7 142 aa18.58■□□□□ 0.57
LDLRAD3-203ENST00000528989 A0A087X0K7 114 aa18.58■□□□□ 0.56
LDLRAD3-203ENST00000528989 SRSF3P84103 164 aaKnown RBP18.58■□□□□ 0.56
LDLRAD3-203ENST00000528989 RBPMS2Q6ZRY4 209 aaKnown RBP18.58■□□□□ 0.56
LDLRAD3-203ENST00000528989 FAM74A7A6NL05 159 aa18.57■□□□□ 0.56
LDLRAD3-203ENST00000528989 HLA-DMBP28068 263 aa18.57■□□□□ 0.56
LDLRAD3-203ENST00000528989 CST9LP1Q5W188 147 aa18.57■□□□□ 0.56
LDLRAD3-203ENST00000528989 DCANP1Q8TF63 244 aa18.57■□□□□ 0.56
LDLRAD3-203ENST00000528989 IGLV1-51P01701 117 aa18.56■□□□□ 0.56
LDLRAD3-203ENST00000528989 IGLL1P15814 213 aa18.56■□□□□ 0.56
LDLRAD3-203ENST00000528989 GGTLC3B5MD39 225 aa18.56■□□□□ 0.56
LDLRAD3-203ENST00000528989 ATP5G3P48201 142 aa18.56■□□□□ 0.56
LDLRAD3-203ENST00000528989 GUK1Q16774 197 aa18.56■□□□□ 0.56
LDLRAD3-203ENST00000528989 RNF182Q8N6D2 247 aa18.56■□□□□ 0.56
LDLRAD3-203ENST00000528989 FAM210AQ96ND0 272 aa18.56■□□□□ 0.56
LDLRAD3-203ENST00000528989 Q9H3A6 140 aa18.56■□□□□ 0.56
LDLRAD3-203ENST00000528989 ZNF331Q9NQX6 463 aaPredicted RBP18.56■□□□□ 0.56
LDLRAD3-203ENST00000528989 TRAV8-2A0A0B4J237 113 aa18.55■□□□□ 0.56
LDLRAD3-203ENST00000528989 RBFOX3A6NFN3 312 aa18.55■□□□□ 0.56
LDLRAD3-203ENST00000528989 SOCS3O14543 225 aa18.55■□□□□ 0.56
LDLRAD3-203ENST00000528989 SUMO1P63165 101 aaKnown RBP18.55■□□□□ 0.56
LDLRAD3-203ENST00000528989 TOR2AQ5JU69 321 aa18.55■□□□□ 0.56
LDLRAD3-203ENST00000528989 FAM24BQ8N5W8 94 aa18.55■□□□□ 0.56
LDLRAD3-203ENST00000528989 CMYA5Q8N3K9 4069 aa18.54■□□□□ 0.56
LDLRAD3-203ENST00000528989 SORL1Q92673 2214 aa18.54■□□□□ 0.56
LDLRAD3-203ENST00000528989 DNASE2O00115 360 aaPredicted RBP18.54■□□□□ 0.56
LDLRAD3-203ENST00000528989 BCL2P10415 239 aa18.54■□□□□ 0.56
LDLRAD3-203ENST00000528989 PMS2P11Q13670 270 aa18.54■□□□□ 0.56
LDLRAD3-203ENST00000528989 EIF5A2Q9GZV4 153 aaKnown RBP18.54■□□□□ 0.56
LDLRAD3-203ENST00000528989 PGPA6NDG6 321 aa18.54■□□□□ 0.56
LDLRAD3-203ENST00000528989 TSPAN4O14817 238 aa18.54■□□□□ 0.56
LDLRAD3-203ENST00000528989 PDE6HQ13956 83 aa18.54■□□□□ 0.56
LDLRAD3-203ENST00000528989 C16orf92Q96LL3 132 aa18.54■□□□□ 0.56
LDLRAD3-203ENST00000528989 MANBALQ9NQG1 85 aa18.54■□□□□ 0.56
LDLRAD3-203ENST00000528989 A0A1W2PRE2 83 aa18.53■□□□□ 0.56
LDLRAD3-203ENST00000528989 M0R3E3 92 aa18.53■□□□□ 0.56
LDLRAD3-203ENST00000528989 CD5P06127 495 aa18.53■□□□□ 0.56
LDLRAD3-203ENST00000528989 ICAM4Q14773 271 aa18.53■□□□□ 0.56
LDLRAD3-203ENST00000528989 RXFP4Q8TDU9 374 aa18.53■□□□□ 0.56
LDLRAD3-203ENST00000528989 LOC102723971A0A1B0GUV8 181 aa18.52■□□□□ 0.56
LDLRAD3-203ENST00000528989 LINC00862A6NCI5 91 aa18.52■□□□□ 0.56
LDLRAD3-203ENST00000528989 C20orf173Q96LM9 149 aa18.52■□□□□ 0.56
LDLRAD3-203ENST00000528989 ZNF705FA8MVS1 300 aaPredicted RBP18.52■□□□□ 0.55
LDLRAD3-203ENST00000528989 C11orf94C9JXX5 98 aa18.52■□□□□ 0.55
LDLRAD3-203ENST00000528989 PPT1P50897 306 aa18.52■□□□□ 0.55
LDLRAD3-203ENST00000528989 GUCA2BQ16661 112 aa18.52■□□□□ 0.55
LDLRAD3-203ENST00000528989 C9JQL5 133 aa18.51■□□□□ 0.55
LDLRAD3-203ENST00000528989 K7EQG2 157 aa18.51■□□□□ 0.55
LDLRAD3-203ENST00000528989 IFNA1P01562 189 aa18.51■□□□□ 0.55
LDLRAD3-203ENST00000528989 CD81P60033 236 aa18.51■□□□□ 0.55
LDLRAD3-203ENST00000528989 C9orf66Q5T8R8 295 aa18.51■□□□□ 0.55
LDLRAD3-203ENST00000528989 COMMD7Q86VX2 200 aa18.51■□□□□ 0.55
LDLRAD3-203ENST00000528989 SLC7A5P1Q8MH63 180 aa18.51■□□□□ 0.55
LDLRAD3-203ENST00000528989 VAX2Q9UIW0 290 aa18.51■□□□□ 0.55
LDLRAD3-203ENST00000528989 PAFAH1B2P68402 229 aa18.5■□□□□ 0.55
LDLRAD3-203ENST00000528989 PSG9Q00887 426 aa18.5■□□□□ 0.55
LDLRAD3-203ENST00000528989 CCDC28AQ8IWP9 274 aa18.5■□□□□ 0.55
LDLRAD3-203ENST00000528989 ZNF256Q9Y2P7 627 aaPredicted RBP18.5■□□□□ 0.55
LDLRAD3-203ENST00000528989 ZNF253O75346 499 aa18.5■□□□□ 0.55
LDLRAD3-203ENST00000528989 MEOX2P50222 304 aa18.5■□□□□ 0.55
LDLRAD3-203ENST00000528989 DEFB1P60022 68 aa18.5■□□□□ 0.55
LDLRAD3-203ENST00000528989 GNG5P63218 68 aa18.5■□□□□ 0.55
LDLRAD3-203ENST00000528989 MEF2BQ02080 365 aaPredicted RBP18.5■□□□□ 0.55
LDLRAD3-203ENST00000528989 ZNF506Q5JVG8 444 aa18.5■□□□□ 0.55
LDLRAD3-203ENST00000528989 LINC00052Q96N35 136 aa18.5■□□□□ 0.55
LDLRAD3-203ENST00000528989 OXLD1Q5BKU9 147 aa18.49■□□□□ 0.55
LDLRAD3-203ENST00000528989 SLC50A1Q9BRV3 221 aa18.49■□□□□ 0.55
LDLRAD3-203ENST00000528989 OTORQ9NRC9 128 aa18.49■□□□□ 0.55
LDLRAD3-203ENST00000528989 MED9Q9NWA0 146 aa18.49■□□□□ 0.55
LDLRAD3-203ENST00000528989 TRAV25A0A0B4J276 109 aa18.48■□□□□ 0.55
LDLRAD3-203ENST00000528989 ZNF688P0C7X2 276 aa18.48■□□□□ 0.55
LDLRAD3-203ENST00000528989 INSL3P51460 131 aa18.48■□□□□ 0.55
LDLRAD3-203ENST00000528989 LYPD1Q8N2G4 141 aa18.48■□□□□ 0.55
LDLRAD3-203ENST00000528989 MCRIP2Q9BUT9 160 aaKnown RBP18.48■□□□□ 0.55
LDLRAD3-203ENST00000528989 AAMDCQ9H7C9 122 aa18.48■□□□□ 0.55
LDLRAD3-203ENST00000528989 ISLRO14498 428 aa18.48■□□□□ 0.55
LDLRAD3-203ENST00000528989 SPAG8Q99932 426 aaPredicted RBP18.48■□□□□ 0.55
LDLRAD3-203ENST00000528989 RPH3ALQ9UNE2 315 aa18.48■□□□□ 0.55
LDLRAD3-203ENST00000528989 ARL2-SNX15V9GYD0 113 aa18.48■□□□□ 0.55
LDLRAD3-203ENST00000528989 SLC25A5P05141 298 aaKnown RBP18.47■□□□□ 0.55
LDLRAD3-203ENST00000528989 DNHD1Q96M86 4753 aa18.46■□□□□ 0.55
LDLRAD3-203ENST00000528989 PRAC2D3DTV9 90 aa18.46■□□□□ 0.55
LDLRAD3-203ENST00000528989 LCN12Q6JVE5 192 aa18.46■□□□□ 0.55
LDLRAD3-203ENST00000528989 SCO2A0A1W2PP80 73 aa18.46■□□□□ 0.54
LDLRAD3-203ENST00000528989 RAB19A4D1S5 217 aa18.46■□□□□ 0.54
LDLRAD3-203ENST00000528989 KRTAP21-3Q3LHN1 58 aa18.46■□□□□ 0.54
LDLRAD3-203ENST00000528989 PRR31Q5SQ13 230 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms