RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 TAS2R30P59541 319 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 RPS20P60866 119 aaKnown RBP3.27□□□□□ -1.89
CD44-226ENST00000527889 HSPE1P61604 102 aaKnown RBP3.27□□□□□ -1.89
CD44-226ENST00000527889 RUNX1Q01196 453 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 BAXQ07812 192 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 LOXL1Q08397 574 aaPredicted RBP3.27□□□□□ -1.89
CD44-226ENST00000527889 SLC38A11Q08AI6 406 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 FHL2Q14192 279 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 PLGLAQ15195 96 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 MMDQ15546 238 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 PRSS8Q16651 343 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 LINC01620Q4KN68 170 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 SOHLH1Q5JUK2 328 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 MINOS1Q5TGZ0 78 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 TMEM14EPQ6UXP3 125 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 ZNF429Q86V71 674 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 BAP18Q8IXM2 172 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 KIR2DL5AQ8N109 375 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 OR5AU1Q8NGC0 362 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 OR1L8Q8NGR8 309 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 OR13C6PQ8NH95 151 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 KIR2DL5BQ8NHK3 375 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 TMEM167AQ8TBQ9 72 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 CIB3Q96Q77 187 aaPredicted RBP3.27□□□□□ -1.89
CD44-226ENST00000527889 ATP5SQ99766 215 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 REG4Q9BYZ8 158 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 COMMD5Q9GZQ3 224 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 SH3BGRL3Q9H299 93 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 PLEKHA3Q9HB20 300 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 C11orf21Q9P2W6 132 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 METTL1Q9UBP6 276 aaKnown RBP3.27□□□□□ -1.89
CD44-226ENST00000527889 SIGLEC9Q9Y336 463 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 WSB1Q9Y6I7 421 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 MINOS1-NBL1R4GNA1 71 aa3.27□□□□□ -1.89
CD44-226ENST00000527889 IGLV5-39A0A0G2JS06 123 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 NCBP2LA6PVI3 153 aaKnown RBP3.26□□□□□ -1.89
CD44-226ENST00000527889 PMS2P5A8MQ11 134 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 OOSP1A8MZH6 123 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 K7EN84 100 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 TCF21O43680 179 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 NUDT3O95989 172 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 MOSP00540 346 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 NMBP08949 121 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 IGHV4-31P0DP07 118 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 CD99P14209 185 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 NPY1RP25929 384 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 ATP6V0CP27449 155 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 RPL27AP46776 148 aaKnown RBP3.26□□□□□ -1.89
CD44-226ENST00000527889 TCL1AP56279 114 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 CKS1BP61024 79 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 EIF5AP63241 154 aaKnown RBP3.26□□□□□ -1.89
CD44-226ENST00000527889 HBG1P69891 147 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 HBG2P69892 147 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 PRCDQ00LT1 54 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 KLF17Q5JT82 389 aaPredicted RBP3.26□□□□□ -1.89
CD44-226ENST00000527889 TCF24Q7RTU0 167 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 SLC16A13Q7RTY0 426 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 PPP1R27Q86WC6 154 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 NIT1Q86X76 327 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 TMEM219Q86XT9 240 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 SMIM20Q8N5G0 67 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 UBAC2Q8NBM4 344 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 WFDC11Q8NEX6 87 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 OR2T10Q8NGZ9 312 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 OR4A5Q8NH83 315 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 PRSS3P2Q8NHM4 247 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 LYPD6BQ8NI32 183 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 VSTM2AQ8TAG5 236 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 BAALCQ8WXS3 180 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 MALSU1Q96EH3 234 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 MRPL53Q96EL3 112 aaKnown RBP3.26□□□□□ -1.89
CD44-226ENST00000527889 UHRF2Q96PU4 802 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 GINS3Q9BRX5 216 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 ACTR3CQ9C0K3 210 aaPredicted RBP3.26□□□□□ -1.89
CD44-226ENST00000527889 NDUFA4L2Q9NRX3 87 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 VPREB3Q9UKI3 123 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 ZNF257Q9Y2Q1 563 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 UFC1Q9Y3C8 167 aa3.26□□□□□ -1.89
CD44-226ENST00000527889 A0A1B0GV50 99 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 MDFIC2A0A1B0GVS7 189 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 IGLC7A0M8Q6 106 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 ZNF705EA8MWA4 302 aaPredicted RBP3.25□□□□□ -1.89
CD44-226ENST00000527889 KRBOX1C9JBD0 128 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 J3QLI3 93 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 M0R143 59 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 NDUFA3O95167 84 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 IGHV3-48P01763 117 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 FAM157CP0CG43 387 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 RNASE2P10153 161 aaKnown RBP3.25□□□□□ -1.89
CD44-226ENST00000527889 FGF7P21781 194 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 BRS3P32247 399 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 RAB5BP61020 215 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 SLC35B1P78383 322 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 NDPQ00604 133 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 WT1-ASQ06250 92 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 EBI3Q14213 229 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 ZNF266Q14584 549 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 LY6EQ16553 131 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 CLLU1Q5K131 121 aa3.25□□□□□ -1.89
CD44-226ENST00000527889 Q71RC1 249 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms