RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 C8orf31Q8N9H6 132 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 OR11H1Q8NG94 326 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 OR9G4Q8NGQ1 327 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 OR11H2Q8NH07 326 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 COQ8AQ8NI60 647 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 PIFOQ8TCI5 191 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 RAB2BQ8WUD1 216 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 PTH2Q96A98 100 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 RPEQ96AT9 228 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 MALSU1Q96EH3 234 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 SFRP2Q96HF1 295 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 MAP1LC3CQ9BXW4 147 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 PARP12Q9H0J9 701 aaKnown RBP2.41□□□□□ -2.02
CD44-219ENST00000525685 DCSTAMPQ9H295 470 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 ARV1Q9H2C2 271 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 ZNF230Q9UIE0 474 aaPredicted RBP2.41□□□□□ -2.02
CD44-219ENST00000525685 AMMECR1Q9Y4X0 333 aaPredicted RBP2.41□□□□□ -2.02
CD44-219ENST00000525685 HILPDAQ9Y5L2 63 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 HIVEP2P31629 2446 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 C2CD3Q4AC94 2353 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 CSPG4Q6UVK1 2322 aa2.4□□□□□ -2.02
CD44-219ENST00000525685 TRBV6-7A0A0A0MS04 114 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 IGHV3-72A0A0B4J1Y9 119 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 IGHV1-3A0A0C4DH29 117 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 MEIS3P1A6NDR6 274 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 OOSP1A8MZH6 123 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 I3L521 148 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 TGOLN2O43493 480 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 YPEL1O60688 119 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 IGKV1D-33P01593 117 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 IGKV1-33P01594 117 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 C1QBP02746 253 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 SAA2P0DJI9 122 aaPredicted RBP2.4□□□□□ -2.03
CD44-219ENST00000525685 HLA-GP17693 338 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 CD24P25063 80 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 AKR1C3P42330 323 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 REG1BP48304 166 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 RAB7AP51149 207 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 RORCP51449 518 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 ZNF137PP52743 207 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 TMBIM6P55061 237 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 TAS2R20P59543 309 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 KRTAP10-1P60331 282 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 RAB2AP61019 212 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 RANP62826 216 aaKnown RBP2.4□□□□□ -2.03
CD44-219ENST00000525685 BTN1A1Q13410 526 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 EBI3Q14213 229 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 KIR2DS1Q14954 304 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 DEFB116Q30KQ4 102 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 CT45A1Q5HYN5 189 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 C6orf226Q5I0X4 101 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 LY6G6FQ5SQ64 297 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 TMEM69Q5SWH9 247 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 PLET1Q6UQ28 207 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 C12orf54Q6X4T0 127 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 ZNF833PQ6ZTB9 187 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 SLC16A13Q7RTY0 426 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 H1FOOQ8IZA3 346 aaPredicted RBP2.4□□□□□ -2.03
CD44-219ENST00000525685 LGI3Q8N145 548 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 STPG2Q8N412 459 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 C9orf62Q8N4C0 152 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 C12orf45Q8N5I9 185 aaPredicted RBP2.4□□□□□ -2.03
CD44-219ENST00000525685 DRAM1Q8N682 238 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 Q8N6K4 173 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 GDPD1Q8N9F7 314 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 OR4A4PQ8NGN8 299 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 OR1L6Q8NGR2 347 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 OR10X1Q8NGY0 326 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 CT45A3Q8NHU0 189 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 RTN4IP1Q8WWV3 396 aaPredicted RBP2.4□□□□□ -2.03
CD44-219ENST00000525685 ACOT12Q8WYK0 555 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 CREB3L1Q96BA8 519 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 GALMQ96C23 342 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 ISOC1Q96CN7 298 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 RBMXL1Q96E39 390 aaKnown RBP2.4□□□□□ -2.03
CD44-219ENST00000525685 YPEL2Q96QA6 119 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 PHB2Q99623 299 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 VPS25Q9BRG1 176 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 MRPL20Q9BYC9 149 aaKnown RBP2.4□□□□□ -2.03
CD44-219ENST00000525685 NXF2Q9GZY0 626 aaKnown RBP2.4□□□□□ -2.03
CD44-219ENST00000525685 ABCG5Q9H222 651 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 SLC2A9Q9NRM0 540 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 COMMD3Q9UBI1 195 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 ANXA10Q9UJ72 324 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 ANAPC10Q9UM13 185 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 CSDC2Q9Y534 153 aaKnown RBP2.4□□□□□ -2.03
CD44-219ENST00000525685 ZANQ9Y493 2812 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 ZFHX3Q15911 3703 aa2.4□□□□□ -2.03
CD44-219ENST00000525685 NSD1Q96L73 2696 aaPredicted RBP2.39□□□□□ -2.03
CD44-219ENST00000525685 IGLV4-60A0A075B6I1 120 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.39□□□□□ -2.03
CD44-219ENST00000525685 A0A0B4J2A0 478 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 CLPSL1A2RUU4 121 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 ZNF736B4DX44 427 aaPredicted RBP2.39□□□□□ -2.03
CD44-219ENST00000525685 H0Y980 276 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 CYB5BO43169 146 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 HPGDSO60760 199 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 IFNA17P01571 189 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 HLA-DQB1P01920 261 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 RLN2P04090 185 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms