RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 FAM120AOSQ5T036 256 aa14.5□□□□□ -0.09
SDC2-202ENST00000518385 Q6AWC8 147 aa14.5□□□□□ -0.09
SDC2-202ENST00000518385 HCP5Q6MZN7 132 aa14.5□□□□□ -0.09
SDC2-202ENST00000518385 PPP1R27Q86WC6 154 aa14.5□□□□□ -0.09
SDC2-202ENST00000518385 RITA1Q96K30 269 aa14.5□□□□□ -0.09
SDC2-202ENST00000518385 OTORQ9NRC9 128 aa14.5□□□□□ -0.09
SDC2-202ENST00000518385 TENM4Q6N022 2769 aa14.49□□□□□ -0.09
SDC2-202ENST00000518385 NDUFS8O00217 210 aa14.49□□□□□ -0.09
SDC2-202ENST00000518385 KRTAP10-9P60411 292 aa14.49□□□□□ -0.09
SDC2-202ENST00000518385 MORN5Q5VZ52 161 aa14.49□□□□□ -0.09
SDC2-202ENST00000518385 LCN12Q6JVE5 192 aa14.49□□□□□ -0.09
SDC2-202ENST00000518385 SPATA12Q7Z6I5 190 aa14.49□□□□□ -0.09
SDC2-202ENST00000518385 C10orf105Q8TEF2 133 aa14.49□□□□□ -0.09
SDC2-202ENST00000518385 GSX1Q9H4S2 264 aaPredicted RBP14.49□□□□□ -0.09
SDC2-202ENST00000518385 TNCP24821 2201 aa14.49□□□□□ -0.09
SDC2-202ENST00000518385 PGPA6NDG6 321 aa14.48□□□□□ -0.09
SDC2-202ENST00000518385 E7EUB6 86 aa14.48□□□□□ -0.09
SDC2-202ENST00000518385 LMO4P61968 165 aa14.48□□□□□ -0.09
SDC2-202ENST00000518385 C16orf54Q6UWD8 224 aa14.48□□□□□ -0.09
SDC2-202ENST00000518385 TMEM116Q8NCL8 245 aa14.48□□□□□ -0.09
SDC2-202ENST00000518385 OR4C5Q8NGB2 326 aa14.48□□□□□ -0.09
SDC2-202ENST00000518385 PIMREGQ9BSJ6 248 aa14.48□□□□□ -0.09
SDC2-202ENST00000518385 FNDC4Q9H6D8 234 aaPredicted RBP14.48□□□□□ -0.09
SDC2-202ENST00000518385 DOPEY2Q9Y3R5 2298 aa14.48□□□□□ -0.09
SDC2-202ENST00000518385 LOC102724200A0A096LPH7 203 aaPredicted RBP14.47□□□□□ -0.09
SDC2-202ENST00000518385 VWC2LB2RUY7 222 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 CHEK1O14757 476 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 TIMM23O14925 209 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 TCRAP04437 139 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 CAMPP49913 170 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 DLX1P56177 255 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 MLANAQ16655 118 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 CLEC2AQ6UVW9 174 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 NPBQ8NG41 125 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 CFHR4Q92496 578 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 LINC00479Q96M42 142 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 SIRPDQ9H106 197 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 SPG11Q96JI7 2443 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 TRAV34A0A0B4J273 112 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 IGHV1-24A0A0C4DH33 117 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 MOSP00540 346 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 ZFP36P26651 326 aaKnown RBP14.47□□□□□ -0.09
SDC2-202ENST00000518385 DSCR9P59020 149 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 RBX1P62877 108 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 HIST1H1AQ02539 215 aaPredicted RBP14.47□□□□□ -0.09
SDC2-202ENST00000518385 RIGQ13278 110 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 PSMG4Q5JS54 123 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 PRR27Q6MZM9 219 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 UNQ5815/PRO19632Q6UWF5 114 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 VMO1Q7Z5L0 202 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 S100A7AQ86SG5 101 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 DEFB125Q8N687 156 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 URB1-AS1Q96HZ7 61 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 TPSG1Q9NRR2 321 aa14.47□□□□□ -0.09
SDC2-202ENST00000518385 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.46□□□□□ -0.09
SDC2-202ENST00000518385 CD5LO43866 347 aa14.46□□□□□ -0.09
SDC2-202ENST00000518385 PPBPP02775 128 aa14.46□□□□□ -0.09
SDC2-202ENST00000518385 GP9P14770 177 aa14.46□□□□□ -0.09
SDC2-202ENST00000518385 C10orf55Q5SWW7 151 aa14.46□□□□□ -0.09
SDC2-202ENST00000518385 LYPD1Q8N2G4 141 aa14.46□□□□□ -0.09
SDC2-202ENST00000518385 HELZ2Q9BYK8 2649 aaKnown RBP14.46□□□□□ -0.09
SDC2-202ENST00000518385 NDUFA3O95167 84 aa14.45□□□□□ -0.1
SDC2-202ENST00000518385 HOXB4P17483 251 aaPredicted RBP14.45□□□□□ -0.1
SDC2-202ENST00000518385 LDLRAD2Q5SZI1 272 aa14.45□□□□□ -0.1
SDC2-202ENST00000518385 ATOH7Q8N100 152 aa14.45□□□□□ -0.1
SDC2-202ENST00000518385 CRYBG3Q68DQ2 2970 aa14.44□□□□□ -0.1
SDC2-202ENST00000518385 NBR2O15453 112 aa14.44□□□□□ -0.1
SDC2-202ENST00000518385 CNTFRP26992 372 aa14.44□□□□□ -0.1
SDC2-202ENST00000518385 UBE2E1P51965 193 aa14.44□□□□□ -0.1
SDC2-202ENST00000518385 PRB3Q04118 309 aaPredicted RBP14.44□□□□□ -0.1
SDC2-202ENST00000518385 EBI3Q14213 229 aa14.44□□□□□ -0.1
SDC2-202ENST00000518385 SCRT2Q9NQ03 307 aa14.44□□□□□ -0.1
SDC2-202ENST00000518385 BEX4Q9NWD9 120 aaPredicted RBP14.44□□□□□ -0.1
SDC2-202ENST00000518385 K7EQM0 130 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 COTL1Q14019 142 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 PLGLAQ15195 96 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 BVES-AS1Q5T3Y7 98 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 LINC01545Q5VT33 79 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 HIST2H2BCQ6DN03 193 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 Q86TA4 180 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 SSBP4Q9BWG4 385 aaPredicted RBP14.43□□□□□ -0.1
SDC2-202ENST00000518385 Q9H3A6 140 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 FBXL15Q9H469 300 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 HIGD1AQ9Y241 93 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 IGHV4-30-2A0A087WSY4 118 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 CSN1S1P47710 185 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 SEC11AP67812 179 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 KLRD1Q13241 179 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 VAMP3Q15836 100 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 OR1B1Q8NGR6 318 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 GTSF1Q8WW33 167 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 SRSF12Q8WXF0 261 aaKnown RBP14.43□□□□□ -0.1
SDC2-202ENST00000518385 HILPDAQ9Y5L2 63 aa14.43□□□□□ -0.1
SDC2-202ENST00000518385 F11RQ9Y624 299 aaKnown RBP14.43□□□□□ -0.1
SDC2-202ENST00000518385 TEX22C9J3V5 150 aa14.42□□□□□ -0.1
SDC2-202ENST00000518385 GNG5P63218 68 aa14.42□□□□□ -0.1
SDC2-202ENST00000518385 MAJINQ3KP22 176 aa14.42□□□□□ -0.1
SDC2-202ENST00000518385 TCF24Q7RTU0 167 aa14.42□□□□□ -0.1
SDC2-202ENST00000518385 TMEM75Q8N9X5 138 aa14.42□□□□□ -0.1
SDC2-202ENST00000518385 OR1N2Q8NGR9 330 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms