RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 RPS19BP1Q86WX3 136 aaKnown RBP5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 PLXDC1Q8IUK5 500 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 CEND1Q8N111 149 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 TEX29Q8N6K0 151 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 COL25A1Q9BXS0 654 aaPredicted RBP5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 C7orf69Q9H7B7 122 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 NOTCH3Q9UM47 2321 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 LOC107984640A0A0U1RRK4 108 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 A0A1B0GUT8 65 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 CCL5P13501 91 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 KLF17Q5JT82 389 aaPredicted RBP5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 Q6AWC8 147 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 ZBTB34Q8NCN2 500 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 ZNF296Q8WUU4 475 aaPredicted RBP5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 HARBI1Q96MB7 349 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 C8orf49Q96NF6 230 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 TRBV6-6A0A0A6YYG2 114 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 CKS2P33552 79 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 TNFRSF4P43489 277 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 TMEM95Q3KNT9 176 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 ABHD17BQ5VST6 288 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 LYZL1Q6UWQ5 148 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 MOB1BQ7L9L4 216 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 SLC25A45Q8N413 288 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 OR9G4Q8NGQ1 327 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 RTL8AQ9BWD3 113 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 PRO0461Q9UI25 63 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 MUC22E2RYF6 1773 aaPredicted RBP5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 PCSK5Q92824 1860 aa5.79□□□□□ -1.48
LIMCH1-207ENST00000508466 ZNF785A8K8V0 405 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 DUX1O43812 170 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 TCRAP04437 139 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 SAA2P0DJI9 122 aaPredicted RBP5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 EFNA4P52798 201 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 ERVK11-1P61568 191 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 CD177Q8N6Q3 437 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 SPRY4Q9C004 299 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 Q9H3A6 140 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 LRP4O75096 1905 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 TRAV26-2A0A0B4J265 109 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 WI2-2373I1.2A0A1W2PRP0 233 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 C15orf61A6NNL5 157 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 TM4SF4P48230 202 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 B3GALT5-AS1P59052 145 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 TWIST1Q15672 202 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 ZFAND6Q6FIF0 208 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 RAX2Q96IS3 184 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 BEX4Q9NWD9 120 aaPredicted RBP5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 MRPL35Q9NZE8 188 aaKnown RBP5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 CELSR1Q9NYQ6 3014 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 NPIPB11E5RHQ5 1161 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 SCGB1C2P0DMR2 95 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 CCL4P13236 92 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 FKBP2P26885 142 aaKnown RBP5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 CRIP2P52943 208 aaPredicted RBP5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 KRTAP27-1Q3LI81 207 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 GUSBP11Q6P575 273 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 KLHL30-AS1Q8NEE0 82 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 SLC25A10Q9UBX3 287 aaPredicted RBP5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 HHLA3Q9XRX5 114 aa5.78□□□□□ -1.48
LIMCH1-207ENST00000508466 ABCA4P78363 2273 aa5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 IGHV3-35A0A0C4DH35 117 aa5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 IFI27L2Q9H2X8 130 aa5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 TRAV8-2A0A0B4J237 113 aa5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 PIGBOS1A0A0B4J2F0 54 aa5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 TNFRSF13BO14836 293 aaPredicted RBP5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 CRIP1P50238 77 aa5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 LYZP61626 148 aa5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 SRSF6Q13247 344 aaKnown RBP5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 MRPL51Q4U2R6 128 aaKnown RBP5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 FAM231DQ6ZW35 169 aa5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 RPRMLQ8N4K4 120 aa5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 TTC9CQ8N5M4 171 aa5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 DCHS2Q6V1P9 2916 aa5.77□□□□□ -1.49
LIMCH1-207ENST00000508466 CGB1A6NKQ9 187 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 OR11H12B2RN74 326 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 HBDP02042 147 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 ARL3P36405 182 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 RRN3P1Q2M238 152 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 TTC32Q5I0X7 151 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 FAM162BQ5T6X4 162 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 RASL11AQ6T310 242 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 ATP5L2Q7Z4Y8 100 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 TRPT1Q86TN4 253 aaKnown RBP5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 OR11H1Q8NG94 326 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 OR11H2Q8NH07 326 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 Q8TAT8 98 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 CHCHD5Q9BSY4 110 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 TPSG1Q9NRR2 321 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 C2CD3Q4AC94 2353 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 CSMD2Q7Z408 3487 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 IGLV3-32A0A0A0MS00 114 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 LILRA5A6NI73 299 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 WISP2O76076 250 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 PRDX2P32119 198 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 C11orf53Q8IXP5 236 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 OR1L8Q8NGR8 309 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 OR10X1Q8NGY0 326 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms