RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 KLHDC1Q8N7A1 406 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 RNF125Q96EQ8 232 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 AP1S3Q96PC3 154 aa10.72□□□□□ -0.69
GPC1-209ENST00000495100 FAM90A9PA6NNJ1 464 aa10.71□□□□□ -0.69
GPC1-209ENST00000495100 TDGF1P3P51864 188 aa10.71□□□□□ -0.69
GPC1-209ENST00000495100 DEFB1P60022 68 aa10.71□□□□□ -0.69
GPC1-209ENST00000495100 CLEC19AQ6UXS0 136 aa10.71□□□□□ -0.69
GPC1-209ENST00000495100 STPG4Q8N801 248 aa10.71□□□□□ -0.69
GPC1-209ENST00000495100 RNASEH2CQ8TDP1 164 aaKnown RBP10.71□□□□□ -0.69
GPC1-209ENST00000495100 ITPR1Q14643 2758 aa10.71□□□□□ -0.69
GPC1-209ENST00000495100 G3V318 75 aa10.71□□□□□ -0.69
GPC1-209ENST00000495100 HLA-DRB1P01911 266 aa10.71□□□□□ -0.69
GPC1-209ENST00000495100 OR4B1Q8NGF8 309 aa10.71□□□□□ -0.69
GPC1-209ENST00000495100 UQCR10Q9UDW1 63 aa10.71□□□□□ -0.69
GPC1-209ENST00000495100 LAMTOR2Q9Y2Q5 125 aa10.71□□□□□ -0.69
GPC1-209ENST00000495100 RAI1Q7Z5J4 1906 aaPredicted RBP10.71□□□□□ -0.7
GPC1-209ENST00000495100 TNRC6BQ9UPQ9 1833 aaKnown RBP10.71□□□□□ -0.7
GPC1-209ENST00000495100 IGLV2-8P01709 118 aa10.71□□□□□ -0.7
GPC1-209ENST00000495100 ERCC8Q13216 396 aa10.71□□□□□ -0.7
GPC1-209ENST00000495100 COL5A1-AS1Q5SY13 56 aa10.71□□□□□ -0.7
GPC1-209ENST00000495100 IGKV1D-37A0A075B6S9 117 aa10.7□□□□□ -0.7
GPC1-209ENST00000495100 A0A087X0K7 114 aa10.7□□□□□ -0.7
GPC1-209ENST00000495100 FAM181BA6NEQ2 426 aa10.7□□□□□ -0.7
GPC1-209ENST00000495100 BTF3P20290 206 aaKnown RBP10.7□□□□□ -0.7
GPC1-209ENST00000495100 EBLN2Q6P2I7 272 aa10.7□□□□□ -0.7
GPC1-209ENST00000495100 OR4C5Q8NGB2 326 aa10.7□□□□□ -0.7
GPC1-209ENST00000495100 AMN1Q8IY45 258 aa10.7□□□□□ -0.7
GPC1-209ENST00000495100 STXBP6Q8NFX7 210 aa10.7□□□□□ -0.7
GPC1-209ENST00000495100 TMEM189A5PLL7 270 aa10.7□□□□□ -0.7
GPC1-209ENST00000495100 PRSS1P07477 247 aa10.7□□□□□ -0.7
GPC1-209ENST00000495100 MPV17L2Q567V2 206 aa10.7□□□□□ -0.7
GPC1-209ENST00000495100 CKS2P33552 79 aa10.69□□□□□ -0.7
GPC1-209ENST00000495100 TMEM70Q9BUB7 260 aa10.69□□□□□ -0.7
GPC1-209ENST00000495100 PSG8Q9UQ74 426 aa10.69□□□□□ -0.7
GPC1-209ENST00000495100 ZANQ9Y493 2812 aa10.69□□□□□ -0.7
GPC1-209ENST00000495100 VWC2LB2RUY7 222 aa10.69□□□□□ -0.7
GPC1-209ENST00000495100 NBR2O15453 112 aa10.69□□□□□ -0.7
GPC1-209ENST00000495100 COMPP49747 757 aaPredicted RBP10.69□□□□□ -0.7
GPC1-209ENST00000495100 TEX36Q5VZQ5 186 aa10.69□□□□□ -0.7
GPC1-209ENST00000495100 MAPK1IP1LQ8NDC0 245 aa10.69□□□□□ -0.7
GPC1-209ENST00000495100 MAP1LC3CQ9BXW4 147 aa10.69□□□□□ -0.7
GPC1-209ENST00000495100 IGLL1P15814 213 aa10.68□□□□□ -0.7
GPC1-209ENST00000495100 C8orf46Q8TAG6 207 aa10.68□□□□□ -0.7
GPC1-209ENST00000495100 GTSF1Q8WW33 167 aa10.68□□□□□ -0.7
GPC1-209ENST00000495100 SPOCK3Q9BQ16 436 aa10.68□□□□□ -0.7
GPC1-209ENST00000495100 IGLV2-23P01705 113 aa10.68□□□□□ -0.7
GPC1-209ENST00000495100 C2orf88Q9BSF0 95 aa10.68□□□□□ -0.7
GPC1-209ENST00000495100 AP5S1Q9NUS5 200 aa10.68□□□□□ -0.7
GPC1-209ENST00000495100 C21orf62Q9NYP8 219 aa10.68□□□□□ -0.7
GPC1-209ENST00000495100 K7EMI3 77 aa10.68□□□□□ -0.7
GPC1-209ENST00000495100 COA6Q5JTJ3 125 aaKnown RBP10.68□□□□□ -0.7
GPC1-209ENST00000495100 C11orf52Q96A22 123 aa10.68□□□□□ -0.7
GPC1-209ENST00000495100 CHRDL1Q9BU40 450 aa10.68□□□□□ -0.7
GPC1-209ENST00000495100 A0A1B0GUT8 65 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 CEACAM3P40198 252 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 RBPMS2Q6ZRY4 209 aaKnown RBP10.67□□□□□ -0.7
GPC1-209ENST00000495100 NUP37Q8NFH4 326 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 D6R8Y8 96 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 LINC00614P0C842 121 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 FBLN7Q53RD9 439 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 LDLRAD2Q5SZI1 272 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 PRSS57Q6UWY2 283 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 C19orf24Q9BVV8 132 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 NDUFB8O95169 186 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 FAM120AOSQ5T036 256 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 LYZL1Q6UWQ5 148 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 IGFL3Q6UXB1 125 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 ARPC1AQ92747 370 aa10.67□□□□□ -0.7
GPC1-209ENST00000495100 FAM106CPP0CH98 169 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 ARL3P36405 182 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 IFI27P40305 119 aaPredicted RBP10.66□□□□□ -0.7
GPC1-209ENST00000495100 FAM106AQ4KMX7 169 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 DOPEY1Q5JWR5 2465 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 IGKV1-17P01599 117 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 IGLC1P0CG04 106 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 S100A4P26447 101 aaKnown RBP10.66□□□□□ -0.7
GPC1-209ENST00000495100 PDLIM4P50479 330 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 MFAP4P55083 255 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 VMO1Q7Z5L0 202 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 ALKBH7Q9BT30 221 aaPredicted RBP10.66□□□□□ -0.7
GPC1-209ENST00000495100 MSRB1Q9NZV6 116 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 PRRC2AP48634 2157 aaKnown RBP10.66□□□□□ -0.7
GPC1-209ENST00000495100 AARDQ4LEZ3 155 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 SFTA2Q6UW10 78 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 IGF2BP2-AS1Q96M15 143 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 TMEM191AQ9H0A3 160 aa10.66□□□□□ -0.7
GPC1-209ENST00000495100 PAX1P15863 534 aa10.65□□□□□ -0.7
GPC1-209ENST00000495100 C15orf32Q32M92 178 aa10.65□□□□□ -0.7
GPC1-209ENST00000495100 FASNP49327 2511 aaKnown RBP10.65□□□□□ -0.7
GPC1-209ENST00000495100 RIGQ13278 110 aa10.65□□□□□ -0.7
GPC1-209ENST00000495100 VPS25Q9BRG1 176 aa10.65□□□□□ -0.7
GPC1-209ENST00000495100 TRBV9A0A0B4J1U6 114 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 SMIM27A0A1W2PRY6 76 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 CEACAM4O75871 244 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 KHDC1LQ5JSQ8 128 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 DUX5Q96PT3 197 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 ANKRD17O75179 2603 aaKnown RBP10.64□□□□□ -0.71
GPC1-209ENST00000495100 M0R381 172 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 CACNG7P62955 275 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 FAM169BQ8N8A8 192 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms