RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 CYP2G1PQ6ZSU1 146 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 TMED4Q7Z7H5 227 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 RPUSD4Q96CM3 377 aaKnown RBP9.43□□□□□ -0.9
SAMM50-204ENST00000493161 HIGD1AQ9Y241 93 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 MRPS16Q9Y3D3 137 aaKnown RBP9.43□□□□□ -0.9
SAMM50-204ENST00000493161 A0A087X0K7 114 aa9.42□□□□□ -0.9
SAMM50-204ENST00000493161 DUXBA0A1W2PPF3 345 aa9.42□□□□□ -0.9
SAMM50-204ENST00000493161 A0A1W2PPQ1 181 aa9.42□□□□□ -0.9
SAMM50-204ENST00000493161 SMCO3A2RU48 225 aa9.42□□□□□ -0.9
SAMM50-204ENST00000493161 MRPS12O15235 138 aaKnown RBP9.42□□□□□ -0.9
SAMM50-204ENST00000493161 IL5P05113 134 aa9.42□□□□□ -0.9
SAMM50-204ENST00000493161 OR5G3P0C626 314 aa9.42□□□□□ -0.9
SAMM50-204ENST00000493161 SLC25A6P12236 298 aa9.42□□□□□ -0.9
SAMM50-204ENST00000493161 RPL7P18124 248 aaKnown RBP9.42□□□□□ -0.9
SAMM50-204ENST00000493161 XGP55808 180 aa9.42□□□□□ -0.9
SAMM50-204ENST00000493161 PATE2Q6UY27 113 aa9.42□□□□□ -0.9
SAMM50-204ENST00000493161 OR10J6PQ8NGY7 276 aa9.42□□□□□ -0.9
SAMM50-204ENST00000493161 ZNF503Q96F45 646 aa9.42□□□□□ -0.9
SAMM50-204ENST00000493161 CIB3Q96Q77 187 aaPredicted RBP9.42□□□□□ -0.9
SAMM50-204ENST00000493161 PRAC2D3DTV9 90 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 H7BYZ3 331 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 HYPMO75409 117 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 MED6O75586 246 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 CCNKO75909 580 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 LINC00869P0C866 280 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 VAMP1P23763 118 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 RAP2BP61225 183 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 RPP30P78346 268 aaKnown RBP9.41□□□□□ -0.9
SAMM50-204ENST00000493161 TMEM128Q5BJH2 165 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 LYPD1Q8N2G4 141 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 LRTM2Q8N967 370 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 LRRC20Q8TCA0 184 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 TMPRSS5Q9H3S3 457 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 RABL2BQ9UNT1 228 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 TNFRSF18Q9Y5U5 241 aa9.41□□□□□ -0.9
SAMM50-204ENST00000493161 PMS2P5A8MQ11 134 aa9.4□□□□□ -0.9
SAMM50-204ENST00000493161 H3BTX0 84 aa9.4□□□□□ -0.9
SAMM50-204ENST00000493161 HOXB5P09067 269 aa9.4□□□□□ -0.9
SAMM50-204ENST00000493161 PLP1P60201 277 aa9.4□□□□□ -0.9
SAMM50-204ENST00000493161 GFI1BQ5VTD9 330 aa9.4□□□□□ -0.9
SAMM50-204ENST00000493161 VSIG2Q96IQ7 327 aa9.4□□□□□ -0.9
SAMM50-204ENST00000493161 SOSTQ9BQB4 213 aa9.4□□□□□ -0.9
SAMM50-204ENST00000493161 STRAPQ9Y3F4 350 aaKnown RBP9.4□□□□□ -0.9
SAMM50-204ENST00000493161 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
SAMM50-204ENST00000493161 A0A096LPF7 62 aa9.39□□□□□ -0.91
SAMM50-204ENST00000493161 J3KRW8 73 aa9.39□□□□□ -0.91
SAMM50-204ENST00000493161 RLN2P04090 185 aa9.39□□□□□ -0.91
SAMM50-204ENST00000493161 S100A7P31151 101 aa9.39□□□□□ -0.91
SAMM50-204ENST00000493161 PPP1R1AQ13522 171 aa9.39□□□□□ -0.91
SAMM50-204ENST00000493161 Q6ZTI0 123 aa9.39□□□□□ -0.91
SAMM50-204ENST00000493161 DYNC2LI1Q8TCX1 351 aa9.39□□□□□ -0.91
SAMM50-204ENST00000493161 ZNF331Q9NQX6 463 aaPredicted RBP9.39□□□□□ -0.91
SAMM50-204ENST00000493161 LINC00854A0A1B0GVQ3 168 aa9.38□□□□□ -0.91
SAMM50-204ENST00000493161 H3BNG1 76 aa9.38□□□□□ -0.91
SAMM50-204ENST00000493161 SLC17A3O00476 420 aa9.38□□□□□ -0.91
SAMM50-204ENST00000493161 SFT2D2O95562 160 aa9.38□□□□□ -0.91
SAMM50-204ENST00000493161 ANXA7P20073 488 aaKnown RBP9.38□□□□□ -0.91
SAMM50-204ENST00000493161 RRAS2P62070 204 aaPredicted RBP9.38□□□□□ -0.91
SAMM50-204ENST00000493161 POLR2GP62487 172 aaKnown RBP eCLIP9.38□□□□□ -0.91
SAMM50-204ENST00000493161 Q5VSD8 79 aa9.38□□□□□ -0.91
SAMM50-204ENST00000493161 CCDC190Q86UF4 302 aa9.38□□□□□ -0.91
SAMM50-204ENST00000493161 CCDC28AQ8IWP9 274 aa9.38□□□□□ -0.91
SAMM50-204ENST00000493161 ZBTB8BQ8NAP8 495 aaPredicted RBP9.38□□□□□ -0.91
SAMM50-204ENST00000493161 ARL6Q9H0F7 186 aa9.38□□□□□ -0.91
SAMM50-204ENST00000493161 RABL2AQ9UBK7 228 aaPredicted RBP9.38□□□□□ -0.91
SAMM50-204ENST00000493161 RSL24D1Q9UHA3 163 aaKnown RBP9.38□□□□□ -0.91
SAMM50-204ENST00000493161 MYCBP2O75592 4640 aa9.38□□□□□ -0.91
SAMM50-204ENST00000493161 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 SNURFLB1AK76 121 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 ADAP1O75689 374 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 TNFSF8P32971 234 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 ID3Q02535 119 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 SLC38A11Q08AI6 406 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 MORN5Q5VZ52 161 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 C20orf144Q9BQM9 153 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 ARV1Q9H2C2 271 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 PGPEP1Q9NXJ5 209 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 PSENENQ9NZ42 101 aa9.37□□□□□ -0.91
SAMM50-204ENST00000493161 PIGBOS1A0A0B4J2F0 54 aa9.36□□□□□ -0.91
SAMM50-204ENST00000493161 FABP12A6NFH5 140 aa9.36□□□□□ -0.91
SAMM50-204ENST00000493161 DNAH10OSP0CZ25 163 aa9.36□□□□□ -0.91
SAMM50-204ENST00000493161 CT45A10P0DMU9 189 aa9.36□□□□□ -0.91
SAMM50-204ENST00000493161 TRIM63Q969Q1 353 aa9.36□□□□□ -0.91
SAMM50-204ENST00000493161 CCDC59Q9P031 241 aaKnown RBP9.36□□□□□ -0.91
SAMM50-204ENST00000493161 SIVA1O15304 175 aa9.35□□□□□ -0.91
SAMM50-204ENST00000493161 SSSCA1O60232 199 aa9.35□□□□□ -0.91
SAMM50-204ENST00000493161 METTL15P1P0C7V9 234 aa9.35□□□□□ -0.91
SAMM50-204ENST00000493161 SELENOTP62341 195 aa9.35□□□□□ -0.91
SAMM50-204ENST00000493161 DAZ2Q13117 558 aaKnown RBP9.35□□□□□ -0.91
SAMM50-204ENST00000493161 LCN15Q6UWW0 184 aa9.35□□□□□ -0.91
SAMM50-204ENST00000493161 LINC00305Q7Z4B0 112 aa9.35□□□□□ -0.91
SAMM50-204ENST00000493161 ZNF431Q8TF32 576 aaPredicted RBP9.35□□□□□ -0.91
SAMM50-204ENST00000493161 MDFICQ9P1T7 246 aa9.35□□□□□ -0.91
SAMM50-204ENST00000493161 H3BQ15 152 aa9.34□□□□□ -0.91
SAMM50-204ENST00000493161 NXPH4O95158 308 aa9.34□□□□□ -0.91
SAMM50-204ENST00000493161 SMR3BP02814 79 aaPredicted RBP9.34□□□□□ -0.91
SAMM50-204ENST00000493161 CXCL2P19875 107 aa9.34□□□□□ -0.91
SAMM50-204ENST00000493161 ARL16Q0P5N6 197 aa9.34□□□□□ -0.91
SAMM50-204ENST00000493161 SAT2Q96F10 170 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms