RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
UBAP2-211ENST00000488443 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
UBAP2-211ENST00000488443 RPL7P18124 248 aaKnown RBP9.26□□□□□ -0.93
UBAP2-211ENST00000488443 CXCL3P19876 107 aa9.26□□□□□ -0.93
UBAP2-211ENST00000488443 TSPOP30536 169 aa9.26□□□□□ -0.93
UBAP2-211ENST00000488443 FUSP35637 526 aaKnown RBP eCLIP9.26□□□□□ -0.93
UBAP2-211ENST00000488443 PSG3Q16557 428 aa9.26□□□□□ -0.93
UBAP2-211ENST00000488443 TOMM5Q8N4H5 51 aa9.26□□□□□ -0.93
UBAP2-211ENST00000488443 RPUSD4Q96CM3 377 aaKnown RBP9.26□□□□□ -0.93
UBAP2-211ENST00000488443 GNPNAT1Q96EK6 184 aaPredicted RBP9.26□□□□□ -0.93
UBAP2-211ENST00000488443 ARL6Q9H0F7 186 aa9.26□□□□□ -0.93
UBAP2-211ENST00000488443 Q9H8V8 135 aa9.26□□□□□ -0.93
UBAP2-211ENST00000488443 PSENENQ9NZ42 101 aa9.26□□□□□ -0.93
UBAP2-211ENST00000488443 RABL2AQ9UBK7 228 aaPredicted RBP9.26□□□□□ -0.93
UBAP2-211ENST00000488443 NOL3O60936 208 aaKnown RBP9.25□□□□□ -0.93
UBAP2-211ENST00000488443 SCGB1D2O95969 90 aa9.25□□□□□ -0.93
UBAP2-211ENST00000488443 KRTAP10-2P60368 255 aa9.25□□□□□ -0.93
UBAP2-211ENST00000488443 SLC38A11Q08AI6 406 aa9.25□□□□□ -0.93
UBAP2-211ENST00000488443 TMEM256Q8N2U0 113 aa9.25□□□□□ -0.93
UBAP2-211ENST00000488443 PIGBOS1A0A0B4J2F0 54 aa9.24□□□□□ -0.93
UBAP2-211ENST00000488443 PMS2P5A8MQ11 134 aa9.24□□□□□ -0.93
UBAP2-211ENST00000488443 METTL15P1P0C7V9 234 aa9.24□□□□□ -0.93
UBAP2-211ENST00000488443 SLC25A6P12236 298 aa9.24□□□□□ -0.93
UBAP2-211ENST00000488443 CDKN1BP46527 198 aa9.24□□□□□ -0.93
UBAP2-211ENST00000488443 Q8N1X5 172 aa9.24□□□□□ -0.93
UBAP2-211ENST00000488443 RAB2BQ8WUD1 216 aa9.24□□□□□ -0.93
UBAP2-211ENST00000488443 ZNF586Q9NXT0 402 aa9.24□□□□□ -0.93
UBAP2-211ENST00000488443 LRP1BQ9NZR2 4599 aa9.23□□□□□ -0.93
UBAP2-211ENST00000488443 PRAC2D3DTV9 90 aa9.23□□□□□ -0.93
UBAP2-211ENST00000488443 HOXA5P20719 270 aa9.23□□□□□ -0.93
UBAP2-211ENST00000488443 AP3S2P59780 193 aa9.23□□□□□ -0.93
UBAP2-211ENST00000488443 CCDC28AQ8IWP9 274 aa9.23□□□□□ -0.93
UBAP2-211ENST00000488443 LRTM2Q8N967 370 aa9.23□□□□□ -0.93
UBAP2-211ENST00000488443 OR10J6PQ8NGY7 276 aa9.23□□□□□ -0.93
UBAP2-211ENST00000488443 RNASE8Q8TDE3 154 aaKnown RBP9.23□□□□□ -0.93
UBAP2-211ENST00000488443 TMEM263Q8WUH6 116 aaKnown RBP9.23□□□□□ -0.93
UBAP2-211ENST00000488443 TRIM63Q969Q1 353 aa9.23□□□□□ -0.93
UBAP2-211ENST00000488443 SLIRPQ9GZT3 109 aaKnown RBP9.23□□□□□ -0.93
UBAP2-211ENST00000488443 ARV1Q9H2C2 271 aa9.23□□□□□ -0.93
UBAP2-211ENST00000488443 A0A087X0K7 114 aa9.22□□□□□ -0.93
UBAP2-211ENST00000488443 SNURFLB1AK76 121 aa9.22□□□□□ -0.93
UBAP2-211ENST00000488443 ZNF701M0R085 212 aaPredicted RBP9.22□□□□□ -0.93
UBAP2-211ENST00000488443 RLN2P04090 185 aa9.22□□□□□ -0.93
UBAP2-211ENST00000488443 M6PRP20645 277 aa9.22□□□□□ -0.93
UBAP2-211ENST00000488443 ESRGQ1W209 222 aa9.22□□□□□ -0.93
UBAP2-211ENST00000488443 TTC32Q5I0X7 151 aa9.22□□□□□ -0.93
UBAP2-211ENST00000488443 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
UBAP2-211ENST00000488443 PATE2Q6UY27 113 aa9.22□□□□□ -0.93
UBAP2-211ENST00000488443 SOSTQ9BQB4 213 aa9.22□□□□□ -0.93
UBAP2-211ENST00000488443 TMPRSS5Q9H3S3 457 aa9.22□□□□□ -0.93
UBAP2-211ENST00000488443 MGAT4CQ9UBM8 478 aa9.22□□□□□ -0.93
UBAP2-211ENST00000488443 TRAV12-3A0A0B4J271 114 aa9.21□□□□□ -0.94
UBAP2-211ENST00000488443 LINC00854A0A1B0GVQ3 168 aa9.21□□□□□ -0.94
UBAP2-211ENST00000488443 H3BMQ9 156 aa9.21□□□□□ -0.94
UBAP2-211ENST00000488443 H7BYZ3 331 aa9.21□□□□□ -0.94
UBAP2-211ENST00000488443 SLC17A3O00476 420 aa9.21□□□□□ -0.94
UBAP2-211ENST00000488443 ZNF493Q6ZR52 646 aa9.21□□□□□ -0.94
UBAP2-211ENST00000488443 LINC00305Q7Z4B0 112 aa9.21□□□□□ -0.94
UBAP2-211ENST00000488443 RXFP4Q8TDU9 374 aa9.21□□□□□ -0.94
UBAP2-211ENST00000488443 GOSR2O14653 212 aa9.2□□□□□ -0.94
UBAP2-211ENST00000488443 COX7A2P2O60397 106 aa9.2□□□□□ -0.94
UBAP2-211ENST00000488443 TMBIM6P55061 237 aa9.2□□□□□ -0.94
UBAP2-211ENST00000488443 SELENOTP62341 195 aa9.2□□□□□ -0.94
UBAP2-211ENST00000488443 MORN5Q5VZ52 161 aa9.2□□□□□ -0.94
UBAP2-211ENST00000488443 LCN15Q6UWW0 184 aa9.2□□□□□ -0.94
UBAP2-211ENST00000488443 SLC25A21Q9BQT8 299 aaPredicted RBP9.2□□□□□ -0.94
UBAP2-211ENST00000488443 Q9H3A6 140 aa9.2□□□□□ -0.94
UBAP2-211ENST00000488443 ZNF331Q9NQX6 463 aaPredicted RBP9.2□□□□□ -0.94
UBAP2-211ENST00000488443 FLVCR2Q9UPI3 526 aa9.2□□□□□ -0.94
UBAP2-211ENST00000488443 C9orf170A2RU37 121 aa9.19□□□□□ -0.94
UBAP2-211ENST00000488443 MRPS12O15235 138 aaKnown RBP9.19□□□□□ -0.94
UBAP2-211ENST00000488443 PLP1P60201 277 aa9.19□□□□□ -0.94
UBAP2-211ENST00000488443 ID3Q02535 119 aa9.19□□□□□ -0.94
UBAP2-211ENST00000488443 TEPPQ6URK8 271 aa9.19□□□□□ -0.94
UBAP2-211ENST00000488443 Q6ZTI0 123 aa9.19□□□□□ -0.94
UBAP2-211ENST00000488443 S100A7AQ86SG5 101 aa9.19□□□□□ -0.94
UBAP2-211ENST00000488443 OR10P1Q8NGE3 313 aa9.19□□□□□ -0.94
UBAP2-211ENST00000488443 SLC50A1Q9BRV3 221 aa9.19□□□□□ -0.94
UBAP2-211ENST00000488443 NPVFQ9HCQ7 196 aa9.19□□□□□ -0.94
UBAP2-211ENST00000488443 GSKIPQ9P0R6 139 aa9.19□□□□□ -0.94
UBAP2-211ENST00000488443 V9GYH0 126 aa9.19□□□□□ -0.94
UBAP2-211ENST00000488443 TRGV2A0A075B6R0 118 aa9.18□□□□□ -0.94
UBAP2-211ENST00000488443 CCDC160A6NGH7 325 aa9.18□□□□□ -0.94
UBAP2-211ENST00000488443 AGPAT2O15120 278 aa9.18□□□□□ -0.94
UBAP2-211ENST00000488443 INPP1P49441 399 aa9.18□□□□□ -0.94
UBAP2-211ENST00000488443 LINC00315P59091 139 aa9.18□□□□□ -0.94
UBAP2-211ENST00000488443 UBE2MP61081 183 aaKnown RBP9.18□□□□□ -0.94
UBAP2-211ENST00000488443 SMIM8Q96KF7 97 aa9.18□□□□□ -0.94
UBAP2-211ENST00000488443 MRPS16Q9Y3D3 137 aaKnown RBP9.18□□□□□ -0.94
UBAP2-211ENST00000488443 APOBP04114 4563 aaKnown RBP9.18□□□□□ -0.94
UBAP2-211ENST00000488443 TRAV5A0A0B4J249 113 aa9.17□□□□□ -0.94
UBAP2-211ENST00000488443 IGHV3-53P01767 116 aa9.17□□□□□ -0.94
UBAP2-211ENST00000488443 CT45A10P0DMU9 189 aa9.17□□□□□ -0.94
UBAP2-211ENST00000488443 ARL16Q0P5N6 197 aa9.17□□□□□ -0.94
UBAP2-211ENST00000488443 OPCMLQ14982 345 aa9.17□□□□□ -0.94
UBAP2-211ENST00000488443 IAH1Q2TAA2 248 aaPredicted RBP9.17□□□□□ -0.94
UBAP2-211ENST00000488443 C4orf46Q504U0 113 aa9.17□□□□□ -0.94
UBAP2-211ENST00000488443 TMEM14EPQ6UXP3 125 aa9.17□□□□□ -0.94
UBAP2-211ENST00000488443 ZNF546Q86UE3 836 aa9.17□□□□□ -0.94
UBAP2-211ENST00000488443 BPIFA4PQ86YQ2 179 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms