RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SLC35B1P78383 322 aa20.27■□□□□ 0.84
SHOX2-204ENST00000483851 C5orf17Q8NAS9 161 aa20.27■□□□□ 0.84
SHOX2-204ENST00000483851 YAE1D1Q9NRH1 226 aa20.27■□□□□ 0.84
SHOX2-204ENST00000483851 FLNAP21333 2647 aaKnown RBP20.27■□□□□ 0.84
SHOX2-204ENST00000483851 TRBV19A0A075B6N1 114 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 PGPA6NDG6 321 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 GNG4P50150 75 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 IGF2BP2-AS1Q96M15 143 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 IL36BQ9NZH7 164 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 EPDR1Q9UM22 224 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 TRAV9-1A0A075B6T8 112 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 PEX7O00628 323 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 IGLV2-8P01709 118 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 IL17RELQ6ZVW7 336 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 GPR82Q96P67 336 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 Q9H3A6 140 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 CDC42EP3Q9UKI2 254 aa20.26■□□□□ 0.83
SHOX2-204ENST00000483851 CSMD1Q96PZ7 3565 aa20.25■□□□□ 0.83
SHOX2-204ENST00000483851 S100A2P29034 98 aa20.25■□□□□ 0.83
SHOX2-204ENST00000483851 CNN1P51911 297 aaKnown RBP20.25■□□□□ 0.83
SHOX2-204ENST00000483851 C1orf194Q5T5A4 169 aa20.25■□□□□ 0.83
SHOX2-204ENST00000483851 NIT2Q9NQR4 276 aa20.25■□□□□ 0.83
SHOX2-204ENST00000483851 ZNF320A2RRD8 509 aa20.24■□□□□ 0.83
SHOX2-204ENST00000483851 TMEM95Q3KNT9 176 aa20.24■□□□□ 0.83
SHOX2-204ENST00000483851 TMEM183AQ8IXX5 376 aa20.24■□□□□ 0.83
SHOX2-204ENST00000483851 V9GYV3 84 aa20.24■□□□□ 0.83
SHOX2-204ENST00000483851 NDUFA4O00483 81 aa20.24■□□□□ 0.83
SHOX2-204ENST00000483851 GCGP01275 180 aa20.24■□□□□ 0.83
SHOX2-204ENST00000483851 SLC25A5P05141 298 aaKnown RBP20.24■□□□□ 0.83
SHOX2-204ENST00000483851 ELANEP08246 267 aa20.24■□□□□ 0.83
SHOX2-204ENST00000483851 METTL26Q96S19 204 aa20.24■□□□□ 0.83
SHOX2-204ENST00000483851 FOXE3Q13461 319 aa20.23■□□□□ 0.83
SHOX2-204ENST00000483851 PYY3Q5JQD4 70 aa20.23■□□□□ 0.83
SHOX2-204ENST00000483851 OR8I2Q8N0Y5 310 aa20.23■□□□□ 0.83
SHOX2-204ENST00000483851 OR4X2Q8NGF9 303 aa20.23■□□□□ 0.83
SHOX2-204ENST00000483851 ATG101Q9BSB4 218 aa20.23■□□□□ 0.83
SHOX2-204ENST00000483851 IGHV3-35A0A0C4DH35 117 aa20.22■□□□□ 0.83
SHOX2-204ENST00000483851 CLPSL1A2RUU4 121 aa20.22■□□□□ 0.83
SHOX2-204ENST00000483851 BUB3O43684 328 aa20.22■□□□□ 0.83
SHOX2-204ENST00000483851 KLF12Q9Y4X4 402 aa20.22■□□□□ 0.83
SHOX2-204ENST00000483851 ZNF253O75346 499 aa20.22■□□□□ 0.83
SHOX2-204ENST00000483851 OR5I1Q13606 314 aa20.22■□□□□ 0.83
SHOX2-204ENST00000483851 OR10D4PQ8NGN7 298 aa20.22■□□□□ 0.83
SHOX2-204ENST00000483851 OSTCQ9NRP0 149 aa20.22■□□□□ 0.83
SHOX2-204ENST00000483851 SLC17A3O00476 420 aa20.21■□□□□ 0.83
SHOX2-204ENST00000483851 PDZD11Q5EBL8 140 aa20.21■□□□□ 0.83
SHOX2-204ENST00000483851 HIST1H2BLQ99880 126 aa20.21■□□□□ 0.83
SHOX2-204ENST00000483851 U3KQE9 123 aa20.21■□□□□ 0.83
SHOX2-204ENST00000483851 SNRPCP09234 159 aaKnown RBP20.2■□□□□ 0.82
SHOX2-204ENST00000483851 TMEM183BQ1AE95 376 aa20.2■□□□□ 0.82
SHOX2-204ENST00000483851 ARL6IP6Q8N6S5 226 aa20.2■□□□□ 0.82
SHOX2-204ENST00000483851 RNF152Q8N8N0 203 aa20.2■□□□□ 0.82
SHOX2-204ENST00000483851 SMIM12Q96EX1 92 aa20.2■□□□□ 0.82
SHOX2-204ENST00000483851 XKRY2A2RUG3 117 aa20.2■□□□□ 0.82
SHOX2-204ENST00000483851 PSG9Q00887 426 aa20.2■□□□□ 0.82
SHOX2-204ENST00000483851 SIGLEC15Q6ZMC9 328 aa20.2■□□□□ 0.82
SHOX2-204ENST00000483851 GSN-AS1Q9NRJ2 163 aa20.2■□□□□ 0.82
SHOX2-204ENST00000483851 ZFHX3Q15911 3703 aa20.2■□□□□ 0.82
SHOX2-204ENST00000483851 ISLRO14498 428 aa20.19■□□□□ 0.82
SHOX2-204ENST00000483851 TCRAP04437 139 aa20.19■□□□□ 0.82
SHOX2-204ENST00000483851 ERVFC1-1P60608 527 aa20.19■□□□□ 0.82
SHOX2-204ENST00000483851 CMTM2Q8TAZ6 248 aa20.19■□□□□ 0.82
SHOX2-204ENST00000483851 PEF1Q9UBV8 284 aaKnown RBP20.19■□□□□ 0.82
SHOX2-204ENST00000483851 MXRA5Q9NR99 2828 aa20.19■□□□□ 0.82
SHOX2-204ENST00000483851 HECTD1Q9ULT8 2610 aa20.18■□□□□ 0.82
SHOX2-204ENST00000483851 IGHV3-11P01762 117 aa20.18■□□□□ 0.82
SHOX2-204ENST00000483851 MYOZ3Q8TDC0 251 aa20.18■□□□□ 0.82
SHOX2-204ENST00000483851 TRAPPC1Q9Y5R8 145 aa20.18■□□□□ 0.82
SHOX2-204ENST00000483851 A0A087X0K7 114 aa20.18■□□□□ 0.82
SHOX2-204ENST00000483851 H3BTX0 84 aa20.18■□□□□ 0.82
SHOX2-204ENST00000483851 FMC1Q96HJ9 113 aa20.18■□□□□ 0.82
SHOX2-204ENST00000483851 AAMDCQ9H7C9 122 aa20.18■□□□□ 0.82
SHOX2-204ENST00000483851 TRBV12-3P01733 135 aa20.17■□□□□ 0.82
SHOX2-204ENST00000483851 FABP4P15090 132 aa20.17■□□□□ 0.82
SHOX2-204ENST00000483851 TLN2Q9Y4G6 2542 aa20.17■□□□□ 0.82
SHOX2-204ENST00000483851 ZNF469Q96JG9 3925 aaPredicted RBP20.17■□□□□ 0.82
SHOX2-204ENST00000483851 DNAJC9-AS1A6NH13 148 aa20.16■□□□□ 0.82
SHOX2-204ENST00000483851 UBE2G1P62253 170 aa20.16■□□□□ 0.82
SHOX2-204ENST00000483851 RPEL1Q2QD12 228 aa20.16■□□□□ 0.82
SHOX2-204ENST00000483851 C17orf77Q96MU5 243 aa20.16■□□□□ 0.82
SHOX2-204ENST00000483851 GNG5P63218 68 aa20.16■□□□□ 0.82
SHOX2-204ENST00000483851 DNLZQ5SXM8 178 aa20.16■□□□□ 0.82
SHOX2-204ENST00000483851 LINC00479Q96M42 142 aa20.16■□□□□ 0.82
SHOX2-204ENST00000483851 SERTAD4Q9NUC0 356 aa20.16■□□□□ 0.82
SHOX2-204ENST00000483851 IGHV3OR16-8A0A075B7F1 116 aa20.15■□□□□ 0.82
SHOX2-204ENST00000483851 LCNL1Q6ZST4 164 aa20.15■□□□□ 0.82
SHOX2-204ENST00000483851 EXOC3-AS1Q8N2X6 119 aa20.15■□□□□ 0.82
SHOX2-204ENST00000483851 RNASE7Q9H1E1 156 aaKnown RBP20.15■□□□□ 0.82
SHOX2-204ENST00000483851 SMAD5-AS1Q9Y6J3 95 aa20.15■□□□□ 0.82
SHOX2-204ENST00000483851 TRBV6-1A0A0K0K1D8 114 aa20.14■□□□□ 0.81
SHOX2-204ENST00000483851 AMBPP02760 352 aa20.14■□□□□ 0.81
SHOX2-204ENST00000483851 DUX5Q96PT3 197 aa20.14■□□□□ 0.81
SHOX2-204ENST00000483851 SERTM2A0A1B0GWG4 89 aa20.13■□□□□ 0.81
SHOX2-204ENST00000483851 BAGE2Q86Y30 109 aa20.13■□□□□ 0.81
SHOX2-204ENST00000483851 UBE2E2Q96LR5 201 aa20.13■□□□□ 0.81
SHOX2-204ENST00000483851 PACRGQ96M98 296 aaPredicted RBP20.13■□□□□ 0.81
SHOX2-204ENST00000483851 K7EQM0 130 aa20.13■□□□□ 0.81
SHOX2-204ENST00000483851 GPHB5Q86YW7 130 aa20.13■□□□□ 0.81
SHOX2-204ENST00000483851 A0A1W2PS18 150 aa20.11■□□□□ 0.81
SHOX2-204ENST00000483851 FAM106AQ4KMX7 169 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms