RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 DNLZQ5SXM8 178 aa11.44□□□□□ -0.58
NPHP4-208ENST00000478423 LINC01356Q8N9X3 169 aa11.44□□□□□ -0.58
NPHP4-208ENST00000478423 SHISA9B4DS77 424 aa11.44□□□□□ -0.58
NPHP4-208ENST00000478423 TOMM40O96008 361 aa11.44□□□□□ -0.58
NPHP4-208ENST00000478423 STHQ8IWL8 128 aa11.44□□□□□ -0.58
NPHP4-208ENST00000478423 CBY1Q9Y3M2 126 aa11.44□□□□□ -0.58
NPHP4-208ENST00000478423 G3V318 75 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 UBE2CO00762 179 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 PPBPP02775 128 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 SPRNQ5BIV9 151 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 ATP5L2Q7Z4Y8 100 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 USMG5Q96IX5 58 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 TRGV2A0A075B6R0 118 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 LCN12Q6JVE5 192 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 C9orf139Q6ZV77 190 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 HAPLN4Q86UW8 402 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 CTSZQ9UBR2 303 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 TCF21O43680 179 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 NDUFB8O95169 186 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 ZNF138P52744 262 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 PET117Q6UWS5 81 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 LY96Q9Y6Y9 160 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 C22orf46C9J442 243 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 F2Z2F3 143 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 KRTAP27-1Q3LI81 207 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 DENND4AQ7Z401 1863 aa11.43□□□□□ -0.58
NPHP4-208ENST00000478423 IGHV2-70DA0A0C4DH43 119 aa11.42□□□□□ -0.58
NPHP4-208ENST00000478423 GAGE10A6NGK3 116 aa11.42□□□□□ -0.58
NPHP4-208ENST00000478423 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.42□□□□□ -0.58
NPHP4-208ENST00000478423 OVOL3O00110 214 aa11.42□□□□□ -0.58
NPHP4-208ENST00000478423 SUMO2P61956 95 aaKnown RBP11.42□□□□□ -0.58
NPHP4-208ENST00000478423 SHANK2-AS3Q9BTD1 123 aa11.42□□□□□ -0.58
NPHP4-208ENST00000478423 SEM1Q6ZVN7 128 aa11.42□□□□□ -0.58
NPHP4-208ENST00000478423 LYPD1Q8N2G4 141 aa11.42□□□□□ -0.58
NPHP4-208ENST00000478423 USP9XQ93008 2570 aaPredicted RBP11.42□□□□□ -0.58
NPHP4-208ENST00000478423 IGHV1-69DA0A0B4J2H0 117 aa11.42□□□□□ -0.58
NPHP4-208ENST00000478423 IGHV1-69P01742 117 aa11.42□□□□□ -0.58
NPHP4-208ENST00000478423 LEPP41159 167 aa11.42□□□□□ -0.58
NPHP4-208ENST00000478423 HIST3H2BBQ8N257 126 aa11.42□□□□□ -0.58
NPHP4-208ENST00000478423 USP9YO00507 2555 aaPredicted RBP11.42□□□□□ -0.58
NPHP4-208ENST00000478423 EML6Q6ZMW3 1958 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 SORL1Q92673 2214 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 LOC102724200A0A096LPH7 203 aaPredicted RBP11.41□□□□□ -0.58
NPHP4-208ENST00000478423 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 RHPN1-AS1Q9BWJ2 59 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 EVI2AP22794 236 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 ZNF726P1Q15940 193 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 NIT1Q86X76 327 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 AMBPP02760 352 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 CYB5R2Q6BCY4 276 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 ZNF106Q9H2Y7 1883 aaKnown RBP11.41□□□□□ -0.58
NPHP4-208ENST00000478423 SETD2Q9BYW2 2564 aaPredicted RBP11.41□□□□□ -0.58
NPHP4-208ENST00000478423 HBDP02042 147 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 FABP2P12104 132 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 JOSD1Q15040 202 aaPredicted RBP11.41□□□□□ -0.58
NPHP4-208ENST00000478423 LYZL1Q6UWQ5 148 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 NUP35Q8NFH5 326 aa11.41□□□□□ -0.58
NPHP4-208ENST00000478423 NXT2Q9NPJ8 142 aaKnown RBP11.41□□□□□ -0.58
NPHP4-208ENST00000478423 TMEM262E9PQX1 116 aa11.4□□□□□ -0.58
NPHP4-208ENST00000478423 CIDEAO60543 219 aa11.4□□□□□ -0.58
NPHP4-208ENST00000478423 FCN3O75636 299 aa11.4□□□□□ -0.58
NPHP4-208ENST00000478423 PSG3Q16557 428 aa11.4□□□□□ -0.58
NPHP4-208ENST00000478423 POU2AF1Q16633 256 aa11.4□□□□□ -0.58
NPHP4-208ENST00000478423 TMEM256Q8N2U0 113 aa11.4□□□□□ -0.58
NPHP4-208ENST00000478423 ARL6IP6Q8N6S5 226 aa11.4□□□□□ -0.58
NPHP4-208ENST00000478423 TMEM190Q8WZ59 177 aa11.4□□□□□ -0.59
NPHP4-208ENST00000478423 COL4A4P53420 1690 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-208ENST00000478423 NCR2O95944 276 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 GATA3P23771 443 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 NSUN5P1Q3KNT7 163 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 MEIG1Q5JSS6 88 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 ERASQ7Z444 233 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 ZFYVE26Q68DK2 2539 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 ST20Q9HBF5 79 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 FAM223BA6NKX1 122 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 COX6CP09669 75 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
NPHP4-208ENST00000478423 FAM223AQ8IWN6 122 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 FAM110DQ8TAY7 271 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-208ENST00000478423 LHBP01229 141 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 Q5PR19 223 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 JKAMPQ9P055 326 aa11.39□□□□□ -0.59
NPHP4-208ENST00000478423 LINC00587B1AMM8 73 aa11.38□□□□□ -0.59
NPHP4-208ENST00000478423 PEF1Q9UBV8 284 aaKnown RBP11.38□□□□□ -0.59
NPHP4-208ENST00000478423 YPEL3P61236 119 aaPredicted RBP11.38□□□□□ -0.59
NPHP4-208ENST00000478423 CACNG7P62955 275 aa11.38□□□□□ -0.59
NPHP4-208ENST00000478423 DAZ1Q9NQZ3 744 aaKnown RBP11.38□□□□□ -0.59
NPHP4-208ENST00000478423 BEX4Q9NWD9 120 aaPredicted RBP11.38□□□□□ -0.59
NPHP4-208ENST00000478423 SH2D1AO60880 128 aa11.38□□□□□ -0.59
NPHP4-208ENST00000478423 PDE6HQ13956 83 aa11.38□□□□□ -0.59
NPHP4-208ENST00000478423 LCNL1Q6ZST4 164 aa11.38□□□□□ -0.59
NPHP4-208ENST00000478423 HTN3P15516 51 aa11.37□□□□□ -0.59
NPHP4-208ENST00000478423 D6R8Y8 96 aa11.37□□□□□ -0.59
NPHP4-208ENST00000478423 SYNJ2BPP57105 145 aa11.37□□□□□ -0.59
NPHP4-208ENST00000478423 KLHL30-AS1Q8NEE0 82 aa11.37□□□□□ -0.59
NPHP4-208ENST00000478423 JMJD1CQ15652 2540 aa11.37□□□□□ -0.59
NPHP4-208ENST00000478423 TTC9CQ8N5M4 171 aa11.37□□□□□ -0.59
NPHP4-208ENST00000478423 LINC00477Q96M19 166 aa11.37□□□□□ -0.59
NPHP4-208ENST00000478423 NDUFA3O95167 84 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms