RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 TAF9BQ9HBM6 251 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 TNFSF18Q9UNG2 199 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 FAM215AQ9Y5M1 114 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 FGD6Q6ZV73 1430 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 UACAQ9BZF9 1416 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 CNTLNQ9NXG0 1405 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 UHRF1BP1LA0JNW5 1464 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 GLI2P10070 1586 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 TOP2BQ02880 1626 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 SHROOM2Q13796 1616 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 MADDQ8WXG6 1647 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 ADGBQ8N7X0 1667 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 ZNF638Q14966 1978 aaKnown RBP1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 CHD5Q8TDI0 1954 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 MYO9BQ13459 2157 aa1.79□□□□□ -2.12
SMNDC1-205ENST00000477763 OTOGLQ3ZCN5 2332 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 VIRMAQ69YN4 1812 aaKnown RBP1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 COL4A2P08572 1712 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 VWDEQ8N2E2 1590 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 TMEM2Q9UHN6 1383 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 DSPPQ9NZW4 1301 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 A0A0D9SG52 128 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 MDFIC2A0A1B0GVS7 189 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 OR2T8A6NH00 312 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 F6UZH7 168 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 NPFFO15130 113 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 S100A8P05109 93 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 ZNF728P0DKX0 622 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 RBP2P50120 134 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 HES1Q14469 280 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 PCOTHQ58A44 107 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 OR4E2Q8NGC2 313 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 BRK1Q8WUW1 75 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 PPP3R2Q96LZ3 170 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 MCEEQ96PE7 176 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 IMMP2LQ96T52 175 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 GINS4Q9BRT9 223 aa1.78□□□□□ -2.12
SMNDC1-205ENST00000477763 MYH3P11055 1940 aa1.78□□□□□ -2.13
SMNDC1-205ENST00000477763 COL5A3P25940 1745 aaPredicted RBP1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 SETBP1Q9Y6X0 1596 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 ABCA10Q8WWZ4 1543 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 BCL9LQ86UU0 1499 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 KDM6AO15550 1401 aaPredicted RBP1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 ZNF727A8MUV8 499 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 H3BT86 120 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 CORTO00230 105 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 APODP05090 189 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 COX6A1P12074 109 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 RPL28P46779 137 aaKnown RBP1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 FXYD2P54710 66 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 MAXP61244 160 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 SUPT4H1P63272 117 aaKnown RBP1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 ZNF90Q03938 601 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 TMEM155Q4W5P6 130 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 HSD17B12Q53GQ0 312 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 DPPA3Q6W0C5 159 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 Q6ZS52 159 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 TEX29Q8N6K0 151 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 C3orf56Q8N813 242 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 MORN4Q8NDC4 146 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 OR4X2Q8NGF9 303 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 OR5H6Q8NGV6 325 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 OR10AC1Q8NH08 325 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 DIRC1Q969H9 104 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 PRELID3AQ96N28 172 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 ZNF714Q96N38 554 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 TMEM191AQ9H0A3 160 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 NHP2Q9NX24 153 aaKnown RBP1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 ALKQ9UM73 1620 aa1.77□□□□□ -2.13
SMNDC1-205ENST00000477763 TOP2AP11388 1531 aaKnown RBP1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 DSCAML1Q8TD84 2053 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 VPS8Q8N3P4 1428 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 DOCK5Q9H7D0 1870 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 TRAV7A0A075B6U4 112 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 TRGV5A0A0B4J1U4 118 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 C20orf202A1L168 122 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 A8MWV9 139 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 ZNF670-ZNF695F2Z2N8 137 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 K7ERJ3 54 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 UQCRQO14949 82 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 RER1O15258 196 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 FGF7P21781 194 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 GUCA1AP43080 201 aaPredicted RBP1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 EIF2B2P49770 351 aaKnown RBP1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 AKR1D1P51857 326 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 FOXA3P55318 350 aaPredicted RBP1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 DYNLT1P63172 113 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 KHDC3LQ587J8 217 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 PABPC1L2AQ5JQF8 200 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 GLIPR1L1Q6UWM5 242 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 LYZL1Q6UWQ5 148 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 PATE2Q6UY27 113 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 SOSTDC1Q6X4U4 206 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 C7orf65Q6ZTY9 151 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 TCTEX1D1Q8N7M0 179 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 OR4B1Q8NGF8 309 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 LINC00467Q9BRT7 94 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 PSMG3Q9BT73 122 aaPredicted RBP1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 BANF2Q9H503 90 aa1.76□□□□□ -2.13
SMNDC1-205ENST00000477763 TIMM9Q9Y5J7 89 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms