RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 IL5P05113 134 aa11.95□□□□□ -0.5
HMGN1-210ENST00000464078 LINC00869P0C866 280 aa11.95□□□□□ -0.5
HMGN1-210ENST00000464078 CXCL2P19875 107 aa11.95□□□□□ -0.5
HMGN1-210ENST00000464078 SELENOTP62341 195 aa11.95□□□□□ -0.5
HMGN1-210ENST00000464078 OR5I1Q13606 314 aa11.95□□□□□ -0.5
HMGN1-210ENST00000464078 SPANXN5Q5MJ07 72 aa11.95□□□□□ -0.5
HMGN1-210ENST00000464078 TMED4Q7Z7H5 227 aa11.95□□□□□ -0.5
HMGN1-210ENST00000464078 RPUSD4Q96CM3 377 aaKnown RBP11.95□□□□□ -0.5
HMGN1-210ENST00000464078 STRAPQ9Y3F4 350 aaKnown RBP11.95□□□□□ -0.5
HMGN1-210ENST00000464078 H3BP45 60 aa11.94□□□□□ -0.5
HMGN1-210ENST00000464078 HOXA5P20719 270 aa11.94□□□□□ -0.5
HMGN1-210ENST00000464078 FAUP35544 74 aaKnown RBP11.94□□□□□ -0.5
HMGN1-210ENST00000464078 ESRGQ1W209 222 aa11.94□□□□□ -0.5
HMGN1-210ENST00000464078 S100A7AQ86SG5 101 aa11.94□□□□□ -0.5
HMGN1-210ENST00000464078 UHRF2Q96PU4 802 aa11.94□□□□□ -0.5
HMGN1-210ENST00000464078 SOSTQ9BQB4 213 aa11.94□□□□□ -0.5
HMGN1-210ENST00000464078 RNF24Q9Y225 148 aa11.94□□□□□ -0.5
HMGN1-210ENST00000464078 K7EPK0 472 aa11.93□□□□□ -0.5
HMGN1-210ENST00000464078 MRPS12O15235 138 aaKnown RBP11.93□□□□□ -0.5
HMGN1-210ENST00000464078 VAMP1P23763 118 aa11.93□□□□□ -0.5
HMGN1-210ENST00000464078 LCN15Q6UWW0 184 aa11.93□□□□□ -0.5
HMGN1-210ENST00000464078 DYNC2LI1Q8TCX1 351 aa11.93□□□□□ -0.5
HMGN1-210ENST00000464078 EPM2AB3EWF7 344 aa11.92□□□□□ -0.5
HMGN1-210ENST00000464078 OR5G3P0C626 314 aa11.92□□□□□ -0.5
HMGN1-210ENST00000464078 Q6ZRN7 208 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-210ENST00000464078 LRRC20Q8TCA0 184 aa11.92□□□□□ -0.5
HMGN1-210ENST00000464078 SLC50A1Q9BRV3 221 aa11.92□□□□□ -0.5
HMGN1-210ENST00000464078 A0A0J9YY99 117 aa11.91□□□□□ -0.5
HMGN1-210ENST00000464078 SMCO3A2RU48 225 aa11.91□□□□□ -0.5
HMGN1-210ENST00000464078 PMS2P5A8MQ11 134 aa11.91□□□□□ -0.5
HMGN1-210ENST00000464078 RLN2P04090 185 aa11.91□□□□□ -0.5
HMGN1-210ENST00000464078 LINC00315P59091 139 aa11.91□□□□□ -0.5
HMGN1-210ENST00000464078 KIR3DS1Q14943 382 aa11.91□□□□□ -0.5
HMGN1-210ENST00000464078 GFI1BQ5VTD9 330 aa11.91□□□□□ -0.5
HMGN1-210ENST00000464078 TRIM63Q969Q1 353 aa11.91□□□□□ -0.5
HMGN1-210ENST00000464078 SLC25A21Q9BQT8 299 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-210ENST00000464078 ZNF331Q9NQX6 463 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-210ENST00000464078 ZNF586Q9NXT0 402 aa11.91□□□□□ -0.5
HMGN1-210ENST00000464078 FNDC10F2Z333 226 aa11.9□□□□□ -0.5
HMGN1-210ENST00000464078 SFT2D2O95562 160 aa11.9□□□□□ -0.5
HMGN1-210ENST00000464078 AP3S2P59780 193 aa11.9□□□□□ -0.5
HMGN1-210ENST00000464078 DLK1P80370 383 aa11.9□□□□□ -0.5
HMGN1-210ENST00000464078 ID3Q02535 119 aa11.9□□□□□ -0.5
HMGN1-210ENST00000464078 PPP1R1AQ13522 171 aa11.9□□□□□ -0.5
HMGN1-210ENST00000464078 C4orf46Q504U0 113 aa11.9□□□□□ -0.5
HMGN1-210ENST00000464078 PXDC1Q5TGL8 231 aa11.9□□□□□ -0.5
HMGN1-210ENST00000464078 PATE2Q6UY27 113 aa11.9□□□□□ -0.5
HMGN1-210ENST00000464078 CCDC28AQ8IWP9 274 aa11.9□□□□□ -0.5
HMGN1-210ENST00000464078 RAB2BQ8WUD1 216 aa11.9□□□□□ -0.5
HMGN1-210ENST00000464078 GAGE12BA1L429 117 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 FABP12A6NFH5 140 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 SNURFLB1AK76 121 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 GAGE7O76087 117 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 HOXB5P09067 269 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 GAGE12FP0CL80 117 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 GAGE12GP0CL81 117 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 GAGE12IP0CL82 117 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 TNFSF8P32971 234 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 DAZ2Q13117 558 aaKnown RBP11.89□□□□□ -0.51
HMGN1-210ENST00000464078 CDPF1Q6NVV7 123 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 DEDD2Q8WXF8 326 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 C18orf15Q96N68 181 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 BCL7BQ9BQE9 202 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 SLIRPQ9GZT3 109 aaKnown RBP11.89□□□□□ -0.51
HMGN1-210ENST00000464078 ARL6Q9H0F7 186 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 ARV1Q9H2C2 271 aa11.89□□□□□ -0.51
HMGN1-210ENST00000464078 SRRM2Q9UQ35 2752 aaKnown RBP11.89□□□□□ -0.51
HMGN1-210ENST00000464078 CCDC190Q86UF4 302 aa11.88□□□□□ -0.51
HMGN1-210ENST00000464078 ODF3Q96PU9 254 aa11.88□□□□□ -0.51
HMGN1-210ENST00000464078 MRPS26Q9BYN8 205 aaKnown RBP11.88□□□□□ -0.51
HMGN1-210ENST00000464078 TMPRSS5Q9H3S3 457 aa11.88□□□□□ -0.51
HMGN1-210ENST00000464078 PGPEP1Q9NXJ5 209 aa11.88□□□□□ -0.51
HMGN1-210ENST00000464078 PRB4P10163 310 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-210ENST00000464078 ANXA7P20073 488 aaKnown RBP11.87□□□□□ -0.51
HMGN1-210ENST00000464078 UBE2MP61081 183 aaKnown RBP11.87□□□□□ -0.51
HMGN1-210ENST00000464078 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
HMGN1-210ENST00000464078 TOMM5Q8N4H5 51 aa11.87□□□□□ -0.51
HMGN1-210ENST00000464078 SMIM8Q96KF7 97 aa11.87□□□□□ -0.51
HMGN1-210ENST00000464078 PARD6GQ9BYG4 376 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-210ENST00000464078 PSENENQ9NZ42 101 aa11.87□□□□□ -0.51
HMGN1-210ENST00000464078 FAT1Q14517 4588 aa11.87□□□□□ -0.51
HMGN1-210ENST00000464078 MYCBP2O75592 4640 aa11.87□□□□□ -0.51
HMGN1-210ENST00000464078 A0A096LPF7 62 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 PRAC2D3DTV9 90 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 TMBIM6P55061 237 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 TEPPQ6URK8 271 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 TMEM14EPQ6UXP3 125 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 Q6ZTI0 123 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 ZNF546Q86UE3 836 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 BPIFA4PQ86YQ2 179 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 LYPD1Q8N2G4 141 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 VSIG2Q96IQ7 327 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 PYGO2Q9BRQ0 406 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 NPVFQ9HCQ7 196 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 PTTG2Q9NZH5 202 aa11.86□□□□□ -0.51
HMGN1-210ENST00000464078 SLC17A3O00476 420 aa11.85□□□□□ -0.51
HMGN1-210ENST00000464078 SIVA1O15304 175 aa11.85□□□□□ -0.51
HMGN1-210ENST00000464078 SSSCA1O60232 199 aa11.85□□□□□ -0.51
HMGN1-210ENST00000464078 CCNKO75909 580 aa11.85□□□□□ -0.51
HMGN1-210ENST00000464078 INAFM2P0DMQ5 153 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms