RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 C2orf70A6NJV1 201 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 ZNHIT1O43257 154 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 DUSP14O95147 198 aaKnown RBP4.05□□□□□ -1.76
PCDH9-203ENST00000456367 WFDC2Q14508 124 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 C9orf139Q6ZV77 190 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 SH2D6Q7Z4S9 175 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 MRPL35Q9NZE8 188 aaKnown RBP4.05□□□□□ -1.76
PCDH9-203ENST00000456367 MPDZO75970 2070 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 CACNA1IQ9P0X4 2223 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 TRGV11A0A075B6L2 103 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 PRSS29PA6NIE9 313 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 CRPP02741 224 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 RFPL3SP0C7P2 107 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 CFC1BP0CG36 223 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 CFC1P0CG37 223 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 GGNQ86UU5 652 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 LY6G5BQ8NDX9 201 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 TIMM21Q9BVV7 248 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 ZNF581Q9P0T4 197 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 PLXNA4Q9HCM2 1894 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 FNDC1Q4ZHG4 1894 aaPredicted RBP4.05□□□□□ -1.76
PCDH9-203ENST00000456367 KNTC1P50748 2209 aa4.05□□□□□ -1.76
PCDH9-203ENST00000456367 TRBV19A0A075B6N1 114 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 TRAV8-3A0A0A6YYJ7 113 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 TRAV12-3A0A0B4J271 114 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 PRSS57Q6UWY2 283 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 AMTNQ6UX39 209 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 C2orf66Q6UXQ4 117 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 FAM216BQ8N7L0 139 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 NTN5Q8WTR8 489 aaPredicted RBP4.04□□□□□ -1.76
PCDH9-203ENST00000456367 FXYD5Q96DB9 178 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 NDUFA4L2Q9NRX3 87 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 RP1P56715 2156 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 OOSP1A8MZH6 123 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 K7ERJ3 54 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 SOCS3O14543 225 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 IGHV1-2P23083 117 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 LTBRP36941 435 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 TMEM258P61165 79 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 C17orf82Q86X59 251 aaPredicted RBP4.04□□□□□ -1.76
PCDH9-203ENST00000456367 CRIPAKQ8N1N5 446 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 TMEM86BQ8N661 226 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 IGF2BP2-AS1Q96M15 143 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 WDR81Q562E7 1941 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 IGHV1-69DA0A0B4J2H0 117 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 TRBV6-1A0A0K0K1D8 114 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 HIST1H4AP62805 103 aaKnown RBP4.04□□□□□ -1.76
PCDH9-203ENST00000456367 TCF15Q12870 199 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 Q6ZS92 163 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 PIFOQ8TCI5 191 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 PRDM6Q9NQX0 595 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 LRRK1Q38SD2 2015 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 LEPROTO15243 131 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 NDUFC2O95298 119 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 SRSF2Q01130 221 aaKnown RBP4.04□□□□□ -1.76
PCDH9-203ENST00000456367 KHDC1LQ5JSQ8 128 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 Q71RC1 249 aaPredicted RBP4.04□□□□□ -1.76
PCDH9-203ENST00000456367 PCP2Q8IVA1 136 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 SMIM2Q9BVW6 85 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 RALGAPA1Q6GYQ0 2036 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 HEATR5AQ86XA9 2040 aa4.04□□□□□ -1.76
PCDH9-203ENST00000456367 TRAV12-1A0A0B4J245 112 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 TMEM213A2RRL7 107 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 E9PLN8 166 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 H3BT86 120 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 PF4P02776 101 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 SPATA25Q9BR10 227 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 HES7Q9BYE0 225 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 IGKV2-40A0A087WW87 121 aaPredicted RBP4.03□□□□□ -1.76
PCDH9-203ENST00000456367 SMKR1H3BMG3 65 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 IGKV2D-40P01614 121 aaPredicted RBP4.03□□□□□ -1.76
PCDH9-203ENST00000456367 RNASE4P34096 147 aaKnown RBP4.03□□□□□ -1.76
PCDH9-203ENST00000456367 Q6ZUT4 128 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 SAP25Q8TEE9 199 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 DKK2Q9UBU2 259 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 SDK1Q7Z5N4 2213 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 IGKV3-7A0A075B6H7 116 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 FXYD7P58549 80 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 TFF2Q03403 129 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 CD177Q8N6Q3 437 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 SPANXB1Q9NS25 103 aaPredicted RBP4.03□□□□□ -1.76
PCDH9-203ENST00000456367 USP34Q70CQ2 3546 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 MYO9BQ13459 2157 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 MYOFQ9NZM1 2061 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 C17orf100A8MU93 164 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 E9PLD3 99 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 NTN3O00634 580 aaPredicted RBP4.03□□□□□ -1.76
PCDH9-203ENST00000456367 SHISA2Q6UWI4 295 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 GTSF1Q8WW33 167 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 CARD19Q96LW7 228 aa4.03□□□□□ -1.76
PCDH9-203ENST00000456367 MYO7AQ13402 2215 aa4.03□□□□□ -1.77
PCDH9-203ENST00000456367 RNASE1P07998 156 aaKnown RBP4.02□□□□□ -1.77
PCDH9-203ENST00000456367 PPIFP30405 207 aaKnown RBP4.02□□□□□ -1.77
PCDH9-203ENST00000456367 FXYD2P54710 66 aa4.02□□□□□ -1.77
PCDH9-203ENST00000456367 DYNLRB2Q8TF09 96 aa4.02□□□□□ -1.77
PCDH9-203ENST00000456367 RNF183Q96D59 192 aa4.02□□□□□ -1.77
PCDH9-203ENST00000456367 DUX5Q96PT3 197 aa4.02□□□□□ -1.77
PCDH9-203ENST00000456367 PRR25Q96S07 402 aa4.02□□□□□ -1.77
PCDH9-203ENST00000456367 CHD3Q12873 2000 aaKnown RBP4.02□□□□□ -1.77
PCDH9-203ENST00000456367 J3QQQ9 107 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms