RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 UHRF2Q96PU4 802 aa12.91□□□□□ -0.34
MSH6-206ENST00000455383 C20orf144Q9BQM9 153 aa12.91□□□□□ -0.34
MSH6-206ENST00000455383 PPP1R14DQ9NXH3 145 aa12.91□□□□□ -0.34
MSH6-206ENST00000455383 CCDC59Q9P031 241 aaKnown RBP12.91□□□□□ -0.34
MSH6-206ENST00000455383 MRPS16Q9Y3D3 137 aaKnown RBP12.91□□□□□ -0.34
MSH6-206ENST00000455383 IL5P05113 134 aa12.9□□□□□ -0.34
MSH6-206ENST00000455383 HOXA5P20719 270 aa12.9□□□□□ -0.34
MSH6-206ENST00000455383 OR5I1Q13606 314 aa12.9□□□□□ -0.34
MSH6-206ENST00000455383 DYNC2LI1Q8TCX1 351 aa12.9□□□□□ -0.34
MSH6-206ENST00000455383 STRAPQ9Y3F4 350 aaKnown RBP12.9□□□□□ -0.34
MSH6-206ENST00000455383 PMS2P5A8MQ11 134 aa12.89□□□□□ -0.35
MSH6-206ENST00000455383 H3BP45 60 aa12.89□□□□□ -0.35
MSH6-206ENST00000455383 SFT2D2O95562 160 aa12.89□□□□□ -0.35
MSH6-206ENST00000455383 LINC00869P0C866 280 aa12.89□□□□□ -0.35
MSH6-206ENST00000455383 KIR3DS1Q14943 382 aa12.89□□□□□ -0.35
MSH6-206ENST00000455383 RPUSD4Q96CM3 377 aaKnown RBP12.89□□□□□ -0.35
MSH6-206ENST00000455383 A0A0J9YY99 117 aa12.88□□□□□ -0.35
MSH6-206ENST00000455383 ADAP1O75689 374 aa12.88□□□□□ -0.35
MSH6-206ENST00000455383 VAMP1P23763 118 aa12.88□□□□□ -0.35
MSH6-206ENST00000455383 SELENOTP62341 195 aa12.88□□□□□ -0.35
MSH6-206ENST00000455383 PATE2Q6UY27 113 aa12.88□□□□□ -0.35
MSH6-206ENST00000455383 Q6ZRN7 208 aaPredicted RBP12.88□□□□□ -0.35
MSH6-206ENST00000455383 K7EPK0 472 aa12.87□□□□□ -0.35
MSH6-206ENST00000455383 OR5G3P0C626 314 aa12.87□□□□□ -0.35
MSH6-206ENST00000455383 PRB4P10163 310 aaPredicted RBP12.87□□□□□ -0.35
MSH6-206ENST00000455383 CXCL2P19875 107 aa12.87□□□□□ -0.35
MSH6-206ENST00000455383 TNFSF8P32971 234 aa12.87□□□□□ -0.35
MSH6-206ENST00000455383 FAUP35544 74 aaKnown RBP12.87□□□□□ -0.35
MSH6-206ENST00000455383 ID3Q02535 119 aa12.87□□□□□ -0.35
MSH6-206ENST00000455383 PPP1R1AQ13522 171 aa12.87□□□□□ -0.35
MSH6-206ENST00000455383 TRIM63Q969Q1 353 aa12.87□□□□□ -0.35
MSH6-206ENST00000455383 ZNF331Q9NQX6 463 aaPredicted RBP12.87□□□□□ -0.35
MSH6-206ENST00000455383 ZNF586Q9NXT0 402 aa12.87□□□□□ -0.35
MSH6-206ENST00000455383 FABP12A6NFH5 140 aa12.86□□□□□ -0.35
MSH6-206ENST00000455383 HOXB5P09067 269 aa12.86□□□□□ -0.35
MSH6-206ENST00000455383 C4orf46Q504U0 113 aa12.86□□□□□ -0.35
MSH6-206ENST00000455383 S100A7AQ86SG5 101 aa12.86□□□□□ -0.35
MSH6-206ENST00000455383 LRRC20Q8TCA0 184 aa12.86□□□□□ -0.35
MSH6-206ENST00000455383 SLC25A21Q9BQT8 299 aaPredicted RBP12.86□□□□□ -0.35
MSH6-206ENST00000455383 GAGE12BA1L429 117 aa12.85□□□□□ -0.35
MSH6-206ENST00000455383 SMCO3A2RU48 225 aa12.85□□□□□ -0.35
MSH6-206ENST00000455383 EPM2AB3EWF7 344 aa12.85□□□□□ -0.35
MSH6-206ENST00000455383 GAGE7O76087 117 aa12.85□□□□□ -0.35
MSH6-206ENST00000455383 GAGE12FP0CL80 117 aa12.85□□□□□ -0.35
MSH6-206ENST00000455383 GAGE12GP0CL81 117 aa12.85□□□□□ -0.35
MSH6-206ENST00000455383 GAGE12IP0CL82 117 aa12.85□□□□□ -0.35
MSH6-206ENST00000455383 GFI1BQ5VTD9 330 aa12.85□□□□□ -0.35
MSH6-206ENST00000455383 CCDC28AQ8IWP9 274 aa12.85□□□□□ -0.35
MSH6-206ENST00000455383 SLC50A1Q9BRV3 221 aa12.85□□□□□ -0.35
MSH6-206ENST00000455383 PARD6GQ9BYG4 376 aaPredicted RBP12.85□□□□□ -0.35
MSH6-206ENST00000455383 SLIRPQ9GZT3 109 aaKnown RBP12.85□□□□□ -0.35
MSH6-206ENST00000455383 RNF24Q9Y225 148 aa12.85□□□□□ -0.35
MSH6-206ENST00000455383 FNDC10F2Z333 226 aa12.84□□□□□ -0.35
MSH6-206ENST00000455383 RLN2P04090 185 aa12.84□□□□□ -0.35
MSH6-206ENST00000455383 LINC00315P59091 139 aa12.84□□□□□ -0.35
MSH6-206ENST00000455383 POLR2GP62487 172 aaKnown RBP eCLIP12.84□□□□□ -0.35
MSH6-206ENST00000455383 DLK1P80370 383 aa12.84□□□□□ -0.35
MSH6-206ENST00000455383 LCN15Q6UWW0 184 aa12.84□□□□□ -0.35
MSH6-206ENST00000455383 RAB2BQ8WUD1 216 aa12.84□□□□□ -0.35
MSH6-206ENST00000455383 VSIG2Q96IQ7 327 aa12.84□□□□□ -0.35
MSH6-206ENST00000455383 BCL7BQ9BQE9 202 aa12.84□□□□□ -0.35
MSH6-206ENST00000455383 MRPS26Q9BYN8 205 aaKnown RBP12.84□□□□□ -0.35
MSH6-206ENST00000455383 ARL6Q9H0F7 186 aa12.84□□□□□ -0.35
MSH6-206ENST00000455383 ARV1Q9H2C2 271 aa12.84□□□□□ -0.35
MSH6-206ENST00000455383 PSENENQ9NZ42 101 aa12.84□□□□□ -0.35
MSH6-206ENST00000455383 PRAC2D3DTV9 90 aa12.83□□□□□ -0.36
MSH6-206ENST00000455383 CCNKO75909 580 aa12.83□□□□□ -0.36
MSH6-206ENST00000455383 DAZ2Q13117 558 aaKnown RBP12.83□□□□□ -0.36
MSH6-206ENST00000455383 ZBTB8BQ8NAP8 495 aaPredicted RBP12.83□□□□□ -0.36
MSH6-206ENST00000455383 NPVFQ9HCQ7 196 aa12.83□□□□□ -0.36
MSH6-206ENST00000455383 PGPEP1Q9NXJ5 209 aa12.83□□□□□ -0.36
MSH6-206ENST00000455383 A0A096LPF7 62 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 SNURFLB1AK76 121 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 ANXA7P20073 488 aaKnown RBP12.82□□□□□ -0.36
MSH6-206ENST00000455383 XGP55808 180 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 AP3S2P59780 193 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 PXDC1Q5TGL8 231 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 TMEM14EPQ6UXP3 125 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 LYPD1Q8N2G4 141 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 TOMM5Q8N4H5 51 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 DEDD2Q8WXF8 326 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 SMIM8Q96KF7 97 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 C18orf15Q96N68 181 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 TMPRSS5Q9H3S3 457 aa12.82□□□□□ -0.36
MSH6-206ENST00000455383 TMBIM6P55061 237 aa12.81□□□□□ -0.36
MSH6-206ENST00000455383 RRAS2P62070 204 aaPredicted RBP12.81□□□□□ -0.36
MSH6-206ENST00000455383 SLC38A11Q08AI6 406 aa12.81□□□□□ -0.36
MSH6-206ENST00000455383 CCDC190Q86UF4 302 aa12.81□□□□□ -0.36
MSH6-206ENST00000455383 ODF3Q96PU9 254 aa12.81□□□□□ -0.36
MSH6-206ENST00000455383 SLC17A3O00476 420 aa12.8□□□□□ -0.36
MSH6-206ENST00000455383 INAFM2P0DMQ5 153 aa12.8□□□□□ -0.36
MSH6-206ENST00000455383 UBE2MP61081 183 aaKnown RBP12.8□□□□□ -0.36
MSH6-206ENST00000455383 TEPPQ6URK8 271 aa12.8□□□□□ -0.36
MSH6-206ENST00000455383 Q6ZTI0 123 aa12.8□□□□□ -0.36
MSH6-206ENST00000455383 LINC00305Q7Z4B0 112 aa12.8□□□□□ -0.36
MSH6-206ENST00000455383 SAT2Q96F10 170 aaPredicted RBP12.8□□□□□ -0.36
MSH6-206ENST00000455383 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
MSH6-206ENST00000455383 VPS13BQ7Z7G8 4022 aa12.8□□□□□ -0.36
MSH6-206ENST00000455383 DMBT1Q9UGM3 2413 aaPredicted RBP12.8□□□□□ -0.36
MSH6-206ENST00000455383 SSSCA1O60232 199 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms