RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 LHFPL1Q86WI0 220 aa11.35□□□□□ -0.59
RAPGEF3-205ENST00000449771 AGMATQ9BSE5 352 aa11.35□□□□□ -0.59
RAPGEF3-205ENST00000449771 TRBV6-6A0A0A6YYG2 114 aa11.35□□□□□ -0.59
RAPGEF3-205ENST00000449771 FAM110DQ8TAY7 271 aaPredicted RBP11.35□□□□□ -0.59
RAPGEF3-205ENST00000449771 SMPXQ9UHP9 88 aa11.35□□□□□ -0.59
RAPGEF3-205ENST00000449771 IGHV1-69DA0A0B4J2H0 117 aa11.35□□□□□ -0.59
RAPGEF3-205ENST00000449771 IGHV1-69P01742 117 aa11.35□□□□□ -0.59
RAPGEF3-205ENST00000449771 C3orf79P0CE67 100 aa11.35□□□□□ -0.59
RAPGEF3-205ENST00000449771 PLEKHB2Q96CS7 222 aa11.35□□□□□ -0.59
RAPGEF3-205ENST00000449771 ATP6V0E1O15342 81 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 NTF4P34130 210 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 ATXN8Q156A1 80 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 ERG28Q9UKR5 140 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 TRIOBPQ9H2D6 2365 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 ICE1Q9Y2F5 2266 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 TRAV13-1A0A0B4J241 112 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 CFHR3Q02985 330 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 NMSQ5H8A3 153 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 C9orf153Q5TBE3 101 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 RPRMLQ8N4K4 120 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 TNFRSF6BO95407 300 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 RNF144BQ7Z419 303 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 BCL6BQ8N143 479 aaPredicted RBP11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 ZNF581Q9P0T4 197 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 SS18L2Q9UHA2 77 aa11.34□□□□□ -0.59
RAPGEF3-205ENST00000449771 INS-IGF2F8WCM5 200 aa11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 LAMTOR3Q9UHA4 124 aa11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 F5H768 121 aa11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 DAD1P61803 113 aa11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 PRSS47A8MTI9 375 aa11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 AZU1P20160 251 aa11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 CR1LQ2VPA4 569 aa11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 TMEM14EPQ6UXP3 125 aa11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 XCL2Q9UBD3 114 aa11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 LYPD1Q8N2G4 141 aa11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 ZNRD1Q9P1U0 126 aa11.33□□□□□ -0.6
RAPGEF3-205ENST00000449771 FAM231BA6NCW3 169 aa11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 RNASE2P10153 161 aaKnown RBP11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 IL17RELQ6ZVW7 336 aa11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 DMRTC2Q8IXT2 367 aaPredicted RBP11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 RFNGQ9Y644 331 aa11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 CEACAM8P31997 349 aaPredicted RBP11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 C1orf122Q6ZSJ8 110 aa11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 IGHV2-70DA0A0C4DH43 119 aa11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 GUSBP1Q15486 140 aa11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 IGHV2-5P01817 119 aa11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 LINC01559Q495D7 138 aa11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 DLX4Q92988 240 aaPredicted RBP11.32□□□□□ -0.6
RAPGEF3-205ENST00000449771 E9PQ18 207 aa11.31□□□□□ -0.6
RAPGEF3-205ENST00000449771 DKK1O94907 266 aa11.31□□□□□ -0.6
RAPGEF3-205ENST00000449771 RALGAPA1Q6GYQ0 2036 aa11.31□□□□□ -0.6
RAPGEF3-205ENST00000449771 DOCK6Q96HP0 2047 aa11.31□□□□□ -0.6
RAPGEF3-205ENST00000449771 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF3-205ENST00000449771 MLANAQ16655 118 aa11.31□□□□□ -0.6
RAPGEF3-205ENST00000449771 FOXL2NBQ6ZUU3 175 aa11.31□□□□□ -0.6
RAPGEF3-205ENST00000449771 BOD1L2Q8IYS8 172 aa11.31□□□□□ -0.6
RAPGEF3-205ENST00000449771 NUP35Q8NFH5 326 aa11.31□□□□□ -0.6
RAPGEF3-205ENST00000449771 SNRNP200O75643 2136 aaKnown RBP11.3□□□□□ -0.6
RAPGEF3-205ENST00000449771 SHANK2-AS3Q9BTD1 123 aa11.3□□□□□ -0.6
RAPGEF3-205ENST00000449771 COL4A6Q14031 1691 aa11.3□□□□□ -0.6
RAPGEF3-205ENST00000449771 RASL11AQ6T310 242 aa11.3□□□□□ -0.6
RAPGEF3-205ENST00000449771 C15orf62A8K5M9 175 aa11.3□□□□□ -0.6
RAPGEF3-205ENST00000449771 K7EP13 123 aa11.3□□□□□ -0.6
RAPGEF3-205ENST00000449771 LEPROTO15243 131 aa11.3□□□□□ -0.6
RAPGEF3-205ENST00000449771 ZNF562Q6V9R5 426 aa11.3□□□□□ -0.6
RAPGEF3-205ENST00000449771 SBF1O95248 1867 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 RPP25LQ8N5L8 163 aaKnown RBP11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 KLF12Q9Y4X4 402 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 A0A1W2PPI3 338 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 KNCNA6PVL3 124 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 IGFL3Q6UXB1 125 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 GAGE12JA6NER3 117 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 CFHR2P36980 270 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 GAGE4Q13068 117 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 GAGE5Q13069 117 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 LINC01551Q86U37 167 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 TMEM158Q8WZ71 300 aa11.29□□□□□ -0.6
RAPGEF3-205ENST00000449771 SPINK13Q1W4C9 94 aa11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 KLK9Q9UKQ9 250 aa11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 GAGE12HA6NDE8 117 aa11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 J3QLI3 93 aa11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 APOC4P55056 127 aa11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 QRFPP83859 136 aa11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 TRAV1-1A0A0B4J248 108 aa11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 Q86TA4 180 aa11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 TRPT1Q86TN4 253 aaKnown RBP11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 Q8TCH9 128 aa11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 MCRIP2Q9BUT9 160 aaKnown RBP11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 IGHV3-16A0A0C4DH30 117 aa11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 G3V318 75 aa11.28□□□□□ -0.6
RAPGEF3-205ENST00000449771 MYMXA0A1B0GTQ4 84 aa11.27□□□□□ -0.6
RAPGEF3-205ENST00000449771 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.6
RAPGEF3-205ENST00000449771 NDUFB8O95169 186 aa11.27□□□□□ -0.6
RAPGEF3-205ENST00000449771 LIME1Q9H400 295 aa11.27□□□□□ -0.6
RAPGEF3-205ENST00000449771 KLF2Q9Y5W3 355 aaPredicted RBP11.27□□□□□ -0.6
RAPGEF3-205ENST00000449771 CACNA1IQ9P0X4 2223 aa11.27□□□□□ -0.6
RAPGEF3-205ENST00000449771 SPXQ9BT56 116 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms