RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 C17orf77Q96MU5 243 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 SLC50A1Q9BRV3 221 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 NPVFQ9HCQ7 196 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 PSENENQ9NZ42 101 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 RYR1P21817 5038 aa9.71□□□□□ -0.86
PTPRE-203ENST00000442830 NAP1L6A6NFF2 107 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 C16orf90A8MZG2 172 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 H3BP45 60 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 H7BYZ3 331 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 CXCL3P19876 107 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 BTF3P20290 206 aaKnown RBP9.7□□□□□ -0.86
PTPRE-203ENST00000442830 TAS2R30P59541 319 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 C4orf46Q504U0 113 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 TEPPQ6URK8 271 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 ZNF546Q86UE3 836 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 CCDC190Q86UF4 302 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 ZNF575Q86XF7 245 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 OR10P1Q8NGE3 313 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 ZNRF2Q8NHG8 242 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 ZNF503Q96F45 646 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 SMIM8Q96KF7 97 aa9.7□□□□□ -0.86
PTPRE-203ENST00000442830 DYNC1H1Q14204 4646 aaKnown RBP9.7□□□□□ -0.86
PTPRE-203ENST00000442830 ANXA7P20073 488 aaKnown RBP9.69□□□□□ -0.86
PTPRE-203ENST00000442830 INPP1P49441 399 aa9.69□□□□□ -0.86
PTPRE-203ENST00000442830 TMEM182Q6ZP80 229 aaPredicted RBP9.69□□□□□ -0.86
PTPRE-203ENST00000442830 CCDC28AQ8IWP9 274 aa9.69□□□□□ -0.86
PTPRE-203ENST00000442830 GGACTQ9BVM4 153 aa9.69□□□□□ -0.86
PTPRE-203ENST00000442830 V9GYH0 126 aa9.69□□□□□ -0.86
PTPRE-203ENST00000442830 TRAV12-2A0A075B6T6 113 aa9.68□□□□□ -0.86
PTPRE-203ENST00000442830 PLAC8L1A1L4L8 177 aa9.68□□□□□ -0.86
PTPRE-203ENST00000442830 C9orf170A2RU37 121 aa9.68□□□□□ -0.86
PTPRE-203ENST00000442830 TSC22D2O75157 780 aa9.68□□□□□ -0.86
PTPRE-203ENST00000442830 POLR2GP62487 172 aaKnown RBP eCLIP9.68□□□□□ -0.86
PTPRE-203ENST00000442830 CNPY1Q3B7I2 92 aa9.68□□□□□ -0.86
PTPRE-203ENST00000442830 SPANXN2Q5MJ10 180 aa9.68□□□□□ -0.86
PTPRE-203ENST00000442830 BPIFA4PQ86YQ2 179 aa9.68□□□□□ -0.86
PTPRE-203ENST00000442830 RNASE8Q8TDE3 154 aaKnown RBP9.68□□□□□ -0.86
PTPRE-203ENST00000442830 RPUSD4Q96CM3 377 aaKnown RBP9.68□□□□□ -0.86
PTPRE-203ENST00000442830 ARV1Q9H2C2 271 aa9.68□□□□□ -0.86
PTPRE-203ENST00000442830 H3BNG1 76 aa9.67□□□□□ -0.86
PTPRE-203ENST00000442830 GOSR2O14653 212 aa9.67□□□□□ -0.86
PTPRE-203ENST00000442830 SSSCA1O60232 199 aa9.67□□□□□ -0.86
PTPRE-203ENST00000442830 IGFL4Q6B9Z1 124 aa9.67□□□□□ -0.86
PTPRE-203ENST00000442830 TMEM14EPQ6UXP3 125 aa9.67□□□□□ -0.86
PTPRE-203ENST00000442830 ARL6Q9H0F7 186 aa9.67□□□□□ -0.86
PTPRE-203ENST00000442830 PXMP4Q9Y6I8 212 aa9.67□□□□□ -0.86
PTPRE-203ENST00000442830 A0A1W2PPQ1 181 aa9.66□□□□□ -0.86
PTPRE-203ENST00000442830 PMS2P5A8MQ11 134 aa9.66□□□□□ -0.86
PTPRE-203ENST00000442830 CENPXA8MT69 81 aa9.66□□□□□ -0.86
PTPRE-203ENST00000442830 NDUFB6O95139 128 aa9.66□□□□□ -0.86
PTPRE-203ENST00000442830 AZU1P20160 251 aa9.66□□□□□ -0.86
PTPRE-203ENST00000442830 M6PRP20645 277 aa9.66□□□□□ -0.86
PTPRE-203ENST00000442830 TNP2Q05952 138 aa9.66□□□□□ -0.86
PTPRE-203ENST00000442830 RAB31Q13636 194 aa9.66□□□□□ -0.86
PTPRE-203ENST00000442830 RNF141Q8WVD5 230 aa9.66□□□□□ -0.86
PTPRE-203ENST00000442830 GNPNAT1Q96EK6 184 aaPredicted RBP9.66□□□□□ -0.86
PTPRE-203ENST00000442830 UHRF2Q96PU4 802 aa9.66□□□□□ -0.86
PTPRE-203ENST00000442830 ODF3Q96PU9 254 aa9.66□□□□□ -0.86
PTPRE-203ENST00000442830 ZNF331Q9NQX6 463 aaPredicted RBP9.66□□□□□ -0.86
PTPRE-203ENST00000442830 SNURFLB1AK76 121 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 COX7A2P2O60397 106 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 RLN2P04090 185 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 OR4E1P0C645 316 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 METTL15P1P0C7V9 234 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 HTN1P15515 57 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 RRAS2P62070 204 aaPredicted RBP9.65□□□□□ -0.86
PTPRE-203ENST00000442830 GUK1Q16774 197 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 TRIQKQ629K1 86 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 SSX7Q7RTT5 188 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 LINC00305Q7Z4B0 112 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 RXFP4Q8TDU9 374 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 UPK3BQ9BT76 320 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
PTPRE-203ENST00000442830 LINC00588Q9Y4M8 146 aa9.65□□□□□ -0.86
PTPRE-203ENST00000442830 MRPS12O15235 138 aaKnown RBP9.64□□□□□ -0.87
PTPRE-203ENST00000442830 LEPP41159 167 aa9.64□□□□□ -0.87
PTPRE-203ENST00000442830 IAH1Q2TAA2 248 aaPredicted RBP9.64□□□□□ -0.87
PTPRE-203ENST00000442830 LINC00612Q8N6U2 182 aa9.64□□□□□ -0.87
PTPRE-203ENST00000442830 Q9H8V8 135 aa9.64□□□□□ -0.87
PTPRE-203ENST00000442830 CCDC160A6NGH7 325 aa9.63□□□□□ -0.87
PTPRE-203ENST00000442830 AGPAT2O15120 278 aa9.63□□□□□ -0.87
PTPRE-203ENST00000442830 SCGB1D2O95969 90 aa9.63□□□□□ -0.87
PTPRE-203ENST00000442830 PRM2P04554 102 aa9.63□□□□□ -0.87
PTPRE-203ENST00000442830 SLC38A11Q08AI6 406 aa9.63□□□□□ -0.87
PTPRE-203ENST00000442830 FCN2Q15485 313 aa9.63□□□□□ -0.87
PTPRE-203ENST00000442830 Q6ZRG5 221 aa9.63□□□□□ -0.87
PTPRE-203ENST00000442830 PYGO2Q9BRQ0 406 aa9.63□□□□□ -0.87
PTPRE-203ENST00000442830 Q9H3A6 140 aa9.63□□□□□ -0.87
PTPRE-203ENST00000442830 ZNF701M0R085 212 aaPredicted RBP9.62□□□□□ -0.87
PTPRE-203ENST00000442830 ZNF253O75346 499 aa9.62□□□□□ -0.87
PTPRE-203ENST00000442830 OR5I1Q13606 314 aa9.62□□□□□ -0.87
PTPRE-203ENST00000442830 C10orf113Q5VZT2 155 aa9.62□□□□□ -0.87
PTPRE-203ENST00000442830 PATE2Q6UY27 113 aa9.62□□□□□ -0.87
PTPRE-203ENST00000442830 C12orf45Q8N5I9 185 aaPredicted RBP9.62□□□□□ -0.87
PTPRE-203ENST00000442830 ZBTB8BQ8NAP8 495 aaPredicted RBP9.62□□□□□ -0.87
PTPRE-203ENST00000442830 OR1L4Q8NGR5 311 aa9.62□□□□□ -0.87
PTPRE-203ENST00000442830 PFDN5Q99471 154 aa9.62□□□□□ -0.87
PTPRE-203ENST00000442830 SRRQ9GZT4 340 aa9.62□□□□□ -0.87
PTPRE-203ENST00000442830 TRAV26-1A0A087WT03 109 aa9.61□□□□□ -0.87
PTPRE-203ENST00000442830 L7N2F9 121 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms