RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 TPPP2P59282 170 aa3.3□□□□□ -1.88
HMGB3P10-201ENST00000434734 CATR1Q13166 79 aa3.3□□□□□ -1.88
HMGB3P10-201ENST00000434734 KLRD1Q13241 179 aa3.3□□□□□ -1.88
HMGB3P10-201ENST00000434734 EBI3Q14213 229 aa3.3□□□□□ -1.88
HMGB3P10-201ENST00000434734 DPPA3Q6W0C5 159 aa3.3□□□□□ -1.88
HMGB3P10-201ENST00000434734 GTF2H5Q6ZYL4 71 aa3.3□□□□□ -1.88
HMGB3P10-201ENST00000434734 DYNAPQ8N1N2 210 aa3.3□□□□□ -1.88
HMGB3P10-201ENST00000434734 OR4B1Q8NGF8 309 aa3.3□□□□□ -1.88
HMGB3P10-201ENST00000434734 BCL2L10Q9HD36 194 aa3.3□□□□□ -1.88
HMGB3P10-201ENST00000434734 SHANK3Q9BYB0 1731 aa3.3□□□□□ -1.88
HMGB3P10-201ENST00000434734 LTBP4Q8N2S1 1624 aa3.3□□□□□ -1.88
HMGB3P10-201ENST00000434734 RB1CC1Q8TDY2 1594 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 CROCCQ5TZA2 2017 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 NAIPQ13075 1403 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 PPIP5K1Q6PFW1 1433 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 HELZP42694 1942 aaKnown RBP3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 TRAV7A0A075B6U4 112 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 B4DSR2 109 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 H3BPC8 53 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 TIMM17BO60830 172 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 ZNF737O75373 536 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 ZNF705BP0CI00 300 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 SLC25A4P12235 298 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 S100A10P60903 97 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 BLCAPP62952 87 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 FAM27BQ5VT28 67 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 Q8IYB0 196 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 Q8NAQ8 132 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 KLF14Q8TD94 323 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 CHCHD1Q96BP2 118 aaKnown RBP3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 SNRNP25Q9BV90 132 aaKnown RBP3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 DUSP21Q9H596 190 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 FRMPD1Q5SYB0 1578 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 ZFYVE16Q7Z3T8 1539 aa3.29□□□□□ -1.88
HMGB3P10-201ENST00000434734 COL1A1P02452 1464 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 MYOM2P54296 1465 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 TRAV3A0A0B4J244 114 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 KLF7O75840 302 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 CLPSP04118 112 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 IL4P05112 153 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 BTG2P78543 158 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 EIF4EBP1Q13541 118 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 KRTAP25-1Q3LHN0 102 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 Q6ZR54 194 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 C4orf33Q8N1A6 199 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 Q8N2B8 174 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 KCNRGQ8N5I3 272 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 SEC11CQ9BY50 192 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 SLC35B3Q9H1N7 401 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 FAM215AQ9Y5M1 114 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 AKAP11Q9UKA4 1901 aa3.28□□□□□ -1.88
HMGB3P10-201ENST00000434734 TRPM1Q7Z4N2 1603 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 TRBV20-1A0A075B6N2 111 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 A0A0D9SG52 128 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 H7C2G1 150 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 SDCBPO00560 298 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 TPT1P13693 172 aaKnown RBP3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 HIST1H1BP16401 226 aaKnown RBP3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 ZNF14P17017 642 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 COL8A2P25067 703 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 FUSP35637 526 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 TMEM258P61165 79 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 SS18Q15532 418 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 MRGPRG-AS1Q2M3A8 158 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 KPRPQ5T749 579 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 RETNLBQ9BQ08 111 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 IER3IP1Q9Y5U9 82 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 HSPE1-MOB4S4R3N1 261 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 A2ML1A8K2U0 1454 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 COL5A2P05997 1499 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 KIAA1549Q9HCM3 1950 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 CACNA1DQ01668 2161 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 PRR14LQ5THK1 2151 aa3.27□□□□□ -1.89
HMGB3P10-201ENST00000434734 PLXNA3P51805 1871 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 CPAMD8Q8IZJ3 1885 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 TRAV12-2A0A075B6T6 113 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 TRGV5A0A0B4J1U4 118 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 A0A1B0GU33 70 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 GNRH2O43555 120 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 CISD3P0C7P0 127 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 FABP4P15090 132 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 PCBD1P61457 104 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 Q6ZQT0 140 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 Q6ZUT4 128 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 C5orf17Q8NAS9 161 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 CLEC2BQ92478 149 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 MCEEQ96PE7 176 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 NABP2Q9BQ15 211 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 AGPAT4-IT1Q9H0P7 198 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 RERGLQ9H628 205 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 RPL26L1Q9UNX3 145 aaKnown RBP3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 TIMM9Q9Y5J7 89 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 KIF25-AS1Q9Y6Z4 181 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 S4R3C0 116 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 PHIPQ8WWQ0 1821 aa3.26□□□□□ -1.89
HMGB3P10-201ENST00000434734 DIDO1Q9BTC0 2240 aaKnown RBP3.25□□□□□ -1.89
HMGB3P10-201ENST00000434734 QRICH2Q9H0J4 1663 aa3.25□□□□□ -1.89
HMGB3P10-201ENST00000434734 TRBV10-2A0A0K0K1G8 114 aa3.25□□□□□ -1.89
HMGB3P10-201ENST00000434734 TMEM235A6NFC5 223 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms