RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 OR7C2O60412 319 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 SPINK4O60575 86 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 FSTL3O95633 263 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 TSPAN13O95857 204 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 NUDT3O95989 172 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 RPL13AP40429 203 aaKnown RBP6.45□□□□□ -1.38
VTI1A-202ENST00000432306 MEOX1P50221 254 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 FOXA3P55318 350 aaPredicted RBP6.45□□□□□ -1.38
VTI1A-202ENST00000432306 SUMO2P61956 95 aaKnown RBP6.45□□□□□ -1.38
VTI1A-202ENST00000432306 RPL8P62917 257 aaKnown RBP6.45□□□□□ -1.38
VTI1A-202ENST00000432306 SLC35B1P78383 322 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 LINC01545Q5VT33 79 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 S100A7AQ86SG5 101 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 KLF14Q8TD94 323 aaPredicted RBP6.45□□□□□ -1.38
VTI1A-202ENST00000432306 TTTY12Q9BZ98 90 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 Q9H8V8 135 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 ENY2Q9NPA8 101 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 AMMECR1Q9Y4X0 333 aaPredicted RBP6.45□□□□□ -1.38
VTI1A-202ENST00000432306 NCKAP5O14513 1909 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 ZNF407Q9C0G0 2248 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 IGHV3-43A0A0B4J1X8 118 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 IGHV1-24A0A0C4DH33 117 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 C19orf71A6NCJ1 209 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 HIGD1CA8MV81 97 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 CORTO00230 105 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 UPK2O00526 184 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 PEX7O00628 323 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 PRYO14603 147 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 LEPROTL1O95214 131 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 IGKV3-15P01624 115 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 ORM1P02763 201 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 IGHV3-43DP0DP04 118 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 COX8AP10176 69 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 PSG1P11464 419 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 PSG9Q00887 426 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 ZNF329Q86UD4 541 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 CD177Q8N6Q3 437 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 KIR3DL3Q8N743 410 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 THAP8Q8NA92 274 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 ZNF430Q9H8G1 570 aaPredicted RBP6.45□□□□□ -1.38
VTI1A-202ENST00000432306 ZNF355PQ9NSJ1 428 aa6.45□□□□□ -1.38
VTI1A-202ENST00000432306 PRRC2CQ9Y520 2896 aaKnown RBP6.44□□□□□ -1.38
VTI1A-202ENST00000432306 PKDREJQ9NTG1 2253 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 CCDC168Q8NDH2 2452 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.44□□□□□ -1.38
VTI1A-202ENST00000432306 MUC21A0A0G2JKD1 596 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 MUC21A0A140T8X8 626 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 OR2T8A6NH00 312 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 CEACAM4O75871 244 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 RNASE2P10153 161 aaKnown RBP6.44□□□□□ -1.38
VTI1A-202ENST00000432306 MGST1P10620 155 aaKnown RBP6.44□□□□□ -1.38
VTI1A-202ENST00000432306 MUC21Q5SSG8 566 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 C2orf91Q6ZV80 131 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 SSX8Q7RTT4 187 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 VKORC1L1Q8N0U8 176 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 RPEQ96AT9 228 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 GPR82Q96P67 336 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 VPS25Q9BRG1 176 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 SERTAD4Q9NUC0 356 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 HSPB8Q9UJY1 196 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 WASHC3Q9Y3C0 194 aa6.44□□□□□ -1.38
VTI1A-202ENST00000432306 CSMD1Q96PZ7 3565 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 MTORP42345 2549 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 TRBV6-1A0A0K0K1D8 114 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 A8MWL6 223 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 DEFB108AA8MXU0 73 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 CA1P00915 261 aaPredicted RBP6.43□□□□□ -1.38
VTI1A-202ENST00000432306 APOHP02749 345 aaPredicted RBP6.43□□□□□ -1.38
VTI1A-202ENST00000432306 SMIM17P0DL12 118 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 MPV17P39210 176 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 MAGEA5P43359 124 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 UBE2L3P68036 154 aaKnown RBP6.43□□□□□ -1.38
VTI1A-202ENST00000432306 SRYQ05066 204 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 RPL39P5Q59GN2 51 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 AMMECR1LQ6DCA0 310 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 SPINK14Q6IE38 97 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 ZNF826PQ6ZT77 177 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 MTURNQ8N3F0 131 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 OR2T6Q8NHC8 308 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 RFESDQ8TAC1 157 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 TIMD4Q96H15 378 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 OR51B2Q9Y5P1 312 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 APCP25054 2843 aa6.43□□□□□ -1.38
VTI1A-202ENST00000432306 ZFHX3Q15911 3703 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 PCSK5Q92824 1860 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 TRAV8-6A0A0B4J262 113 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 H3BRM9 83 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 OVOL3O00110 214 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 LTAP01374 205 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 GPR183P32249 361 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 GUSBP1Q15486 140 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 PVRIGQ6DKI7 326 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 NEGR1Q7Z3B1 354 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 OR1N2Q8NGR9 330 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 FXYD5Q96DB9 178 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 SSBP3Q9BWW4 388 aaPredicted RBP6.42□□□□□ -1.38
VTI1A-202ENST00000432306 NPFFR1Q9GZQ6 430 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 RPP21Q9H633 154 aaKnown RBP6.42□□□□□ -1.38
VTI1A-202ENST00000432306 CALYQ9NYX4 217 aa6.42□□□□□ -1.38
VTI1A-202ENST00000432306 DOCK11Q5JSL3 2073 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms