RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 TNP2Q05952 138 aa10.61□□□□□ -0.71
CSNK1E-208ENST00000431611 RPUSD4Q96CM3 377 aaKnown RBP10.61□□□□□ -0.71
CSNK1E-208ENST00000431611 C16orf74Q96GX8 76 aa10.61□□□□□ -0.71
CSNK1E-208ENST00000431611 ARL6Q9H0F7 186 aa10.61□□□□□ -0.71
CSNK1E-208ENST00000431611 RNF24Q9Y225 148 aa10.61□□□□□ -0.71
CSNK1E-208ENST00000431611 CCNKO75909 580 aa10.6□□□□□ -0.71
CSNK1E-208ENST00000431611 METTL15P1P0C7V9 234 aa10.6□□□□□ -0.71
CSNK1E-208ENST00000431611 PRB4P10163 310 aaPredicted RBP10.6□□□□□ -0.71
CSNK1E-208ENST00000431611 CDKN1BP46527 198 aa10.6□□□□□ -0.71
CSNK1E-208ENST00000431611 TMEM14EPQ6UXP3 125 aa10.6□□□□□ -0.71
CSNK1E-208ENST00000431611 PATE2Q6UY27 113 aa10.6□□□□□ -0.71
CSNK1E-208ENST00000431611 CCDC190Q86UF4 302 aa10.6□□□□□ -0.71
CSNK1E-208ENST00000431611 C6orf223Q8N319 242 aa10.6□□□□□ -0.71
CSNK1E-208ENST00000431611 OR10P1Q8NGE3 313 aa10.6□□□□□ -0.71
CSNK1E-208ENST00000431611 ARV1Q9H2C2 271 aa10.6□□□□□ -0.71
CSNK1E-208ENST00000431611 TIMM8BQ9Y5J9 83 aaPredicted RBP10.6□□□□□ -0.71
CSNK1E-208ENST00000431611 C16orf90A8MZG2 172 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 FNDC10F2Z333 226 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 K7EPK0 472 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 MRPS12O15235 138 aaKnown RBP10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 NDUFB6O95139 128 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 INPP1P49441 399 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 SLC38A11Q08AI6 406 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 TEPPQ6URK8 271 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 ZNF493Q6ZR52 646 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 RNF141Q8WVD5 230 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 NOP10Q9NPE3 64 aaKnown RBP10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 MGAT4CQ9UBM8 478 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 LINC00588Q9Y4M8 146 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 NACAE9PAV3 2078 aa10.59□□□□□ -0.71
CSNK1E-208ENST00000431611 ABCA13Q86UQ4 5058 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 NAP1L6A6NFF2 107 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 CCDC160A6NGH7 325 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 H7BYZ3 331 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 GOSR2O14653 212 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 SCGB1D2O95969 90 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 OR4E1P0C645 316 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 CXCL2P19875 107 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 CLINT1Q14677 625 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 PXDC1Q5TGL8 231 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 TMEM263Q8WUH6 116 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 KRTAP4-5Q9BYR2 181 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 ZNF331Q9NQX6 463 aaPredicted RBP10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 FLVCR2Q9UPI3 526 aa10.58□□□□□ -0.72
CSNK1E-208ENST00000431611 SNRPCP09234 159 aaKnown RBP10.57□□□□□ -0.72
CSNK1E-208ENST00000431611 TAS2R30P59541 319 aa10.57□□□□□ -0.72
CSNK1E-208ENST00000431611 IAH1Q2TAA2 248 aaPredicted RBP10.57□□□□□ -0.72
CSNK1E-208ENST00000431611 SPANXN2Q5MJ10 180 aa10.57□□□□□ -0.72
CSNK1E-208ENST00000431611 LCN15Q6UWW0 184 aa10.57□□□□□ -0.72
CSNK1E-208ENST00000431611 LINC00305Q7Z4B0 112 aa10.57□□□□□ -0.72
CSNK1E-208ENST00000431611 ZNF546Q86UE3 836 aa10.57□□□□□ -0.72
CSNK1E-208ENST00000431611 RNASE8Q8TDE3 154 aaKnown RBP10.57□□□□□ -0.72
CSNK1E-208ENST00000431611 SLC50A1Q9BRV3 221 aa10.57□□□□□ -0.72
CSNK1E-208ENST00000431611 SRRQ9GZT4 340 aa10.57□□□□□ -0.72
CSNK1E-208ENST00000431611 TSC22D2O75157 780 aa10.56□□□□□ -0.72
CSNK1E-208ENST00000431611 OR5I1Q13606 314 aa10.56□□□□□ -0.72
CSNK1E-208ENST00000431611 C4orf46Q504U0 113 aa10.56□□□□□ -0.72
CSNK1E-208ENST00000431611 TRIQKQ629K1 86 aa10.56□□□□□ -0.72
CSNK1E-208ENST00000431611 SSX7Q7RTT5 188 aa10.56□□□□□ -0.72
CSNK1E-208ENST00000431611 BPIFA4PQ86YQ2 179 aa10.56□□□□□ -0.72
CSNK1E-208ENST00000431611 CCDC28AQ8IWP9 274 aa10.56□□□□□ -0.72
CSNK1E-208ENST00000431611 OR10J6PQ8NGY7 276 aa10.56□□□□□ -0.72
CSNK1E-208ENST00000431611 C20orf144Q9BQM9 153 aa10.56□□□□□ -0.72
CSNK1E-208ENST00000431611 GSKIPQ9P0R6 139 aa10.56□□□□□ -0.72
CSNK1E-208ENST00000431611 LINC00854A0A1B0GVQ3 168 aa10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 AGPAT2O15120 278 aa10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 COX7A2P2O60397 106 aa10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 CDK2AP2O75956 126 aa10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 ARL16Q0P5N6 197 aa10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 KIR3DS1Q14943 382 aa10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 BAK1Q16611 211 aa10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 ZBTB8BQ8NAP8 495 aaPredicted RBP10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 GNPNAT1Q96EK6 184 aaPredicted RBP10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 GGACTQ9BVM4 153 aa10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 PARD6GQ9BYG4 376 aaPredicted RBP10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 HSPG2P98160 4391 aa10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 MUC4Q99102 2169 aa10.55□□□□□ -0.72
CSNK1E-208ENST00000431611 TRAV26-1A0A087WT03 109 aa10.54□□□□□ -0.72
CSNK1E-208ENST00000431611 PRAC2D3DTV9 90 aa10.54□□□□□ -0.72
CSNK1E-208ENST00000431611 H3BTX0 84 aa10.54□□□□□ -0.72
CSNK1E-208ENST00000431611 GFI1BQ5VTD9 330 aa10.54□□□□□ -0.72
CSNK1E-208ENST00000431611 Q9H8V8 135 aa10.54□□□□□ -0.72
CSNK1E-208ENST00000431611 RCL1Q9Y2P8 373 aaKnown RBP10.54□□□□□ -0.72
CSNK1E-208ENST00000431611 C7orf66A4D0T2 115 aa10.53□□□□□ -0.72
CSNK1E-208ENST00000431611 CENPXA8MT69 81 aa10.53□□□□□ -0.72
CSNK1E-208ENST00000431611 SLC17A3O00476 420 aa10.53□□□□□ -0.72
CSNK1E-208ENST00000431611 M6PRP20645 277 aa10.53□□□□□ -0.72
CSNK1E-208ENST00000431611 LINC00612Q8N6U2 182 aa10.53□□□□□ -0.72
CSNK1E-208ENST00000431611 RXFP4Q8TDU9 374 aa10.53□□□□□ -0.72
CSNK1E-208ENST00000431611 TMEM37Q8WXS4 190 aa10.53□□□□□ -0.72
CSNK1E-208ENST00000431611 ZNF503Q96F45 646 aa10.53□□□□□ -0.72
CSNK1E-208ENST00000431611 MGST2Q99735 147 aa10.53□□□□□ -0.72
CSNK1E-208ENST00000431611 PXMP4Q9Y6I8 212 aa10.53□□□□□ -0.72
CSNK1E-208ENST00000431611 LRP1BQ9NZR2 4599 aa10.53□□□□□ -0.72
CSNK1E-208ENST00000431611 A0A0J9YY99 117 aa10.52□□□□□ -0.73
CSNK1E-208ENST00000431611 GAGE12BA1L429 117 aa10.52□□□□□ -0.73
CSNK1E-208ENST00000431611 SNURFLB1AK76 121 aa10.52□□□□□ -0.73
CSNK1E-208ENST00000431611 GAGE7O76087 117 aa10.52□□□□□ -0.73
CSNK1E-208ENST00000431611 MBPP02686 304 aaPredicted RBP10.52□□□□□ -0.73
CSNK1E-208ENST00000431611 RLN2P04090 185 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms