RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 IL17RELQ6ZVW7 336 aa14.54□□□□□ -0.08
ARHGEF28-203ENST00000426542 ZNF625Q96I27 306 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF28-203ENST00000426542 SYS1-DBNDD2H3BUS1 97 aa14.54□□□□□ -0.08
ARHGEF28-203ENST00000426542 SHANK2-AS3Q9BTD1 123 aa14.54□□□□□ -0.08
ARHGEF28-203ENST00000426542 MCRIP2Q9BUT9 160 aaKnown RBP14.54□□□□□ -0.08
ARHGEF28-203ENST00000426542 DKK1O94907 266 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 DOCK6Q96HP0 2047 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 C3orf56Q8N813 242 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 ZNF48Q96MX3 618 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 FAM186AA6NE01 2351 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 TRAV8-3A0A0A6YYJ7 113 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 C1orf194Q5T5A4 169 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 LIME1Q9H400 295 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 PRIMA1Q86XR5 153 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 GBF1Q92538 1859 aa14.52□□□□□ -0.08
ARHGEF28-203ENST00000426542 SP5Q6BEB4 398 aaPredicted RBP14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 LINC00479Q96M42 142 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 CFHR3Q02985 330 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE2BQ13066 116 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 C1orf122Q6ZSJ8 110 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 SRSF8Q9BRL6 282 aaKnown RBP14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 OCIAD2Q56VL3 154 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 ZFAND6Q6FIF0 208 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 MAPK1IP1LQ8NDC0 245 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 A0A1W2PPI3 338 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 ATP6V0E1O15342 81 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 PRR30Q53SZ7 412 aaPredicted RBP14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 ARMS2P0C7Q2 107 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 LY6G5BQ8NDX9 201 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 TNFRSF6BO95407 300 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 Q6ZRM9 215 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 Q6ZS49 121 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 FREM3P0C091 2139 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 ESDP10768 282 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 C8orf49Q96NF6 230 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 MRPL27Q9P0M9 148 aaKnown RBP14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 KNCNA6PVL3 124 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 VWC2LB2RUY7 222 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 MSMBP08118 114 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 DLX4Q92988 240 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 ZC2HC1BQ5TFG8 222 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 FOXL2NBQ6ZUU3 175 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 TRPT1Q86TN4 253 aaKnown RBP14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 REG4Q9BYZ8 158 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 SSBP2P81877 361 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 OVOL2Q9BRP0 275 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 XCL2Q9UBD3 114 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 FNDC10F2Z333 226 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 MPV17L2Q567V2 206 aa14.49□□□□□ -0.09
ARHGEF28-203ENST00000426542 HS3ST6Q96QI5 342 aa14.49□□□□□ -0.09
ARHGEF28-203ENST00000426542 LINC01619G3V211 115 aa14.49□□□□□ -0.09
ARHGEF28-203ENST00000426542 KIR3DS1Q14943 382 aa14.49□□□□□ -0.09
ARHGEF28-203ENST00000426542 NDUFS8O00217 210 aa14.49□□□□□ -0.09
ARHGEF28-203ENST00000426542 GFRA4Q9GZZ7 299 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 IGHV3-16A0A0C4DH30 117 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 TMEM75Q8N9X5 138 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 FAM110DQ8TAY7 271 aaPredicted RBP14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 KLK9Q9UKQ9 250 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 UBE2E1P51965 193 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE12JA6NER3 117 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE1Q13065 139 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE4Q13068 117 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE5Q13069 117 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 CHAC1Q9BUX1 264 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 ANAPC10Q9UM13 185 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 KLF12Q9Y4X4 402 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 PDE6HQ13956 83 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 SPINK13Q1W4C9 94 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 LYL1P12980 280 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 SDK2Q58EX2 2172 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 TMEM213A2RRL7 107 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE2AQ6NT46 116 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 TRPM7Q96QT4 1865 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 SPTA1P02549 2419 aa14.46□□□□□ -0.09
ARHGEF28-203ENST00000426542 F5H768 121 aa14.46□□□□□ -0.09
ARHGEF28-203ENST00000426542 NDUFB8O95169 186 aa14.46□□□□□ -0.09
ARHGEF28-203ENST00000426542 MPDZO75970 2070 aa14.46□□□□□ -0.09
ARHGEF28-203ENST00000426542 DNAJC30Q96LL9 226 aa14.46□□□□□ -0.09
ARHGEF28-203ENST00000426542 Q96MF0 132 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 TP53TG1Q9Y2A0 90 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 DAD1P61803 113 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 CEP290O15078 2479 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 IGHV1-69DA0A0B4J2H0 117 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 IGHV1-69P01742 117 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 TP53BP1Q12888 1972 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 GATA3P23771 443 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 RTTNQ86VV8 2226 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 STPG4Q8N801 248 aa14.44□□□□□ -0.1
ARHGEF28-203ENST00000426542 G3V318 75 aa14.44□□□□□ -0.1
ARHGEF28-203ENST00000426542 CFHR2P36980 270 aa14.44□□□□□ -0.1
ARHGEF28-203ENST00000426542 ZNF561-AS1K7EIQ3 104 aa14.44□□□□□ -0.1
ARHGEF28-203ENST00000426542 EDA2RQ9HAV5 297 aa14.44□□□□□ -0.1
ARHGEF28-203ENST00000426542 IGKV1-6A0A0C4DH72 117 aa14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 TRIOBPQ9H2D6 2365 aa14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 K7ENP7 123 aa14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 PFN1P07737 140 aaKnown RBP14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 AZU1P20160 251 aa14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 CEACAM8P31997 349 aaPredicted RBP14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 TMEM14BQ9NUH8 114 aa14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 ANK1P16157 1881 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms