RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ZZEF1O43149 2961 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 PPIAL4CA0A0B4J2A2 164 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 ZNF785A8K8V0 405 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 I3L2K1 104 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 K7EQM0 130 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 PPIAL4GP0DN37 164 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 BVES-AS1Q5T3Y7 98 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 ABHD17AQ96GS6 310 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 ONECUT1Q9UBC0 465 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 TRBV19A0A075B6N1 114 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 FAM231BA6NCW3 169 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 NPIPB6E9PJ23 425 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 FAM106CPP0CH98 169 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 ARF6P62330 175 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 FAM106AQ4KMX7 169 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 BCL6BQ8N143 479 aaPredicted RBP5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 KAAG1Q9UBP8 84 aa5.96□□□□□ -1.46
SMARCC1-202ENST00000425518 IGHV2-70DA0A0C4DH43 119 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 TAX1BP3O14907 124 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 IGLV1-47P01700 117 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 CT45A10P0DMU9 189 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 HES1Q14469 280 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 AMMECR1LQ6DCA0 310 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 C8orf49Q96NF6 230 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 SELENOKQ9Y6D0 94 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 SPTBN1Q01082 2364 aaKnown RBP5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 TIMM23O14925 209 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 NCR2O95944 276 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 IFI27P40305 119 aaPredicted RBP5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 CRIP1P50238 77 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 RBPJQ06330 500 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 FOXE3Q13461 319 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 C12orf54Q6X4T0 127 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 ANKHD1Q8IWZ3 2542 aaKnown RBP5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 TMEM14CQ9P0S9 112 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 ARHGAP32A7KAX9 2087 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 TMEM213A2RRL7 107 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 SHISA9B4DS77 424 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 CSN1S1P47710 185 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 LOXL1Q08397 574 aaPredicted RBP5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 FOXC1Q12948 553 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 PVRIGQ6DKI7 326 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 SHANK2-AS3Q9BTD1 123 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 SCRT2Q9NQ03 307 aa5.95□□□□□ -1.46
SMARCC1-202ENST00000425518 K7EIM0 57 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 GNG7O60262 68 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 IGHV3-23P01764 117 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 UQCRFS1P47985 274 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 RBX1P62877 108 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 SIGLEC15Q6ZMC9 328 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 OR10AG1Q8NH19 301 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 RNF125Q96EQ8 232 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 ZNF747Q9BV97 191 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 C1RLQ9NZP8 487 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 D6R8Y8 96 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 LY6HO94772 140 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 GPR183P32249 361 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 NHLH1Q02575 133 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 PSG3Q16557 428 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 LYZL1Q6UWQ5 148 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 AMN1Q8IY45 258 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 ZNF491Q8N8L2 437 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 LINC01560Q8TB33 94 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 ZNF292O60281 2723 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 IGHV3OR16-8A0A075B7F1 116 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 TRAV30A0A087WSZ9 112 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 APOBEC3AP31941 199 aaPredicted RBP5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 PRR30Q53SZ7 412 aaPredicted RBP5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 IGFL4Q6B9Z1 124 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 WFDC3Q8IUB2 231 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 TNFRSF14Q92956 283 aa5.94□□□□□ -1.46
SMARCC1-202ENST00000425518 CSMD1Q96PZ7 3565 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 IGHV3-35A0A0C4DH35 117 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 TMEM189A5PLL7 270 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 DEFB125Q8N687 156 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 AAMDCQ9H7C9 122 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 SPTBN4Q9H254 2564 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 SMKR1H3BMG3 65 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 H3BRN7 92 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 LDLRAD2Q5SZI1 272 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 LINC01545Q5VT33 79 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 TMEM75Q8N9X5 138 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 ZNF414Q96IQ9 312 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 PRELID3AQ96N28 172 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 MS4A6AQ9H2W1 248 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 IGKV2-40A0A087WW87 121 aaPredicted RBP5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 IGKV2D-40P01614 121 aaPredicted RBP5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 CD3EP07766 207 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 HIST1H1AQ02539 215 aaPredicted RBP5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 AKAP6Q13023 2319 aa5.93□□□□□ -1.46
SMARCC1-202ENST00000425518 LRBAP50851 2863 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 NCBP2LA6PVI3 153 aaKnown RBP5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 K7EP13 123 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 OVOL3O00110 214 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 PSG9Q00887 426 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 SIGLEC8Q9NYZ4 499 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 B9A039 149 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 KLRD1Q13241 179 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 ANKRD39Q53RE8 183 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms