RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 LINC00311Q8N616 119 aa16.84■□□□□ 0.29
USP48-205ENST00000421625 TMEM213A2RRL7 107 aa16.83■□□□□ 0.29
USP48-205ENST00000421625 CD40P25942 277 aa16.83■□□□□ 0.29
USP48-205ENST00000421625 IGFL2Q6UWQ7 119 aa16.83■□□□□ 0.29
USP48-205ENST00000421625 PSG8Q9UQ74 426 aa16.83■□□□□ 0.29
USP48-205ENST00000421625 ANKRD11Q6UB99 2663 aaPredicted RBP16.83■□□□□ 0.28
USP48-205ENST00000421625 K7EP34 96 aa16.83■□□□□ 0.28
USP48-205ENST00000421625 RBP4P02753 201 aa16.83■□□□□ 0.28
USP48-205ENST00000421625 PRSS57Q6UWY2 283 aa16.83■□□□□ 0.28
USP48-205ENST00000421625 FAM215AQ9Y5M1 114 aa16.83■□□□□ 0.28
USP48-205ENST00000421625 ZZEF1O43149 2961 aa16.83■□□□□ 0.28
USP48-205ENST00000421625 A0A0G2JLM5 398 aa16.83■□□□□ 0.28
USP48-205ENST00000421625 DEFB109BQ30KR1 87 aa16.83■□□□□ 0.28
USP48-205ENST00000421625 DPF1Q92782 380 aa16.83■□□□□ 0.28
USP48-205ENST00000421625 C8orf49Q96NF6 230 aa16.83■□□□□ 0.28
USP48-205ENST00000421625 TMSB15BA0A087X1C1 80 aa16.82■□□□□ 0.28
USP48-205ENST00000421625 SMAD7O15105 426 aaKnown RBP16.82■□□□□ 0.28
USP48-205ENST00000421625 MC5RP33032 325 aa16.82■□□□□ 0.28
USP48-205ENST00000421625 LGALS7P47929 136 aa16.82■□□□□ 0.28
USP48-205ENST00000421625 Q5PR19 223 aa16.82■□□□□ 0.28
USP48-205ENST00000421625 AMN1Q8IY45 258 aa16.82■□□□□ 0.28
USP48-205ENST00000421625 TMEM75Q8N9X5 138 aa16.82■□□□□ 0.28
USP48-205ENST00000421625 TMEM133Q9H2Q1 129 aa16.82■□□□□ 0.28
USP48-205ENST00000421625 F11RQ9Y624 299 aaKnown RBP16.82■□□□□ 0.28
USP48-205ENST00000421625 APC2O95996 2303 aa16.82■□□□□ 0.28
USP48-205ENST00000421625 TRBV19A0A075B6N1 114 aa16.82■□□□□ 0.28
USP48-205ENST00000421625 TRBV6-1A0A0K0K1D8 114 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 A1L4Q6 167 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 G3V4G9 280 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 LGALS9BQ3B8N2 356 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 C3orf36Q3SXR2 165 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 LGALS9CQ6DKI2 356 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 ADAMTSL5Q6ZMM2 481 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 PCP2Q8IVA1 136 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 OR1N2Q8NGR9 330 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 PRELID3AQ96N28 172 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 NGBQ9NPG2 151 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 CTSZQ9UBR2 303 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 ACACAQ13085 2346 aa16.81■□□□□ 0.28
USP48-205ENST00000421625 TEX22C9J3V5 150 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 M0R3E3 92 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 HSD52Q0P140 79 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 SIGLEC15Q6ZMC9 328 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 OR2K2Q8NGT1 345 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 CCL17Q92583 94 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 PPIAL4EA0A075B759 164 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 A0A1B0GW15 77 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 NDUFB3O43676 98 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 PPIAL4FP0DN26 164 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 PAX2Q02962 417 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 PSG3Q16557 428 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 LYZL1Q6UWQ5 148 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 RASL11BQ9BPW5 248 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 SIGLEC9Q9Y336 463 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 INSIG2Q9Y5U4 225 aa16.8■□□□□ 0.28
USP48-205ENST00000421625 DLX6P56179 175 aa16.79■□□□□ 0.28
USP48-205ENST00000421625 ZNF493Q6ZR52 646 aa16.79■□□□□ 0.28
USP48-205ENST00000421625 IGKV1-17P01599 117 aa16.79■□□□□ 0.28
USP48-205ENST00000421625 CRYGBP07316 175 aa16.79■□□□□ 0.28
USP48-205ENST00000421625 LOXP28300 417 aaPredicted RBP16.79■□□□□ 0.28
USP48-205ENST00000421625 C8orf31Q8N9H6 132 aa16.79■□□□□ 0.28
USP48-205ENST00000421625 MALRD1Q5VYJ5 2156 aa16.79■□□□□ 0.28
USP48-205ENST00000421625 C17orf100A8MU93 164 aa16.78■□□□□ 0.28
USP48-205ENST00000421625 NMUP48645 174 aa16.78■□□□□ 0.28
USP48-205ENST00000421625 WFDC3Q8IUB2 231 aa16.78■□□□□ 0.28
USP48-205ENST00000421625 CLUHP3Q96NS8 147 aa16.78■□□□□ 0.28
USP48-205ENST00000421625 TM4SF20Q53R12 229 aa16.78■□□□□ 0.28
USP48-205ENST00000421625 SMKR1H3BMG3 65 aa16.78■□□□□ 0.28
USP48-205ENST00000421625 TMEM178BH3BS89 294 aa16.78■□□□□ 0.28
USP48-205ENST00000421625 I3L2K1 104 aa16.78■□□□□ 0.28
USP48-205ENST00000421625 PKDREJQ9NTG1 2253 aa16.78■□□□□ 0.28
USP48-205ENST00000421625 IGHV1-8P0DP01 117 aa16.77■□□□□ 0.28
USP48-205ENST00000421625 FAM104BQ5XKR9 115 aa16.77■□□□□ 0.28
USP48-205ENST00000421625 OR9G4Q8NGQ1 327 aa16.77■□□□□ 0.28
USP48-205ENST00000421625 ZNF414Q96IQ9 312 aa16.77■□□□□ 0.28
USP48-205ENST00000421625 SCNM1Q9BWG6 230 aa16.77■□□□□ 0.28
USP48-205ENST00000421625 U3KQK5 164 aa16.77■□□□□ 0.28
USP48-205ENST00000421625 NEGR1Q7Z3B1 354 aa16.77■□□□□ 0.27
USP48-205ENST00000421625 ABHD17AQ96GS6 310 aa16.77■□□□□ 0.27
USP48-205ENST00000421625 SHANK2-AS3Q9BTD1 123 aa16.77■□□□□ 0.27
USP48-205ENST00000421625 K7EQM0 130 aa16.76■□□□□ 0.27
USP48-205ENST00000421625 RBPJQ06330 500 aa16.76■□□□□ 0.27
USP48-205ENST00000421625 ADIPOQQ15848 244 aa16.76■□□□□ 0.27
USP48-205ENST00000421625 MRPL51Q4U2R6 128 aaKnown RBP16.76■□□□□ 0.27
USP48-205ENST00000421625 Q6AWC8 147 aa16.76■□□□□ 0.27
USP48-205ENST00000421625 ORMDL3Q8N138 153 aa16.76■□□□□ 0.27
USP48-205ENST00000421625 FBXL15Q9H469 300 aa16.76■□□□□ 0.27
USP48-205ENST00000421625 CHTOPQ9Y3Y2 248 aaKnown RBP16.76■□□□□ 0.27
USP48-205ENST00000421625 HBDP02042 147 aa16.76■□□□□ 0.27
USP48-205ENST00000421625 PAX8Q06710 450 aa16.76■□□□□ 0.27
USP48-205ENST00000421625 DKK2Q9UBU2 259 aa16.76■□□□□ 0.27
USP48-205ENST00000421625 SPCS1Q9Y6A9 102 aa16.76■□□□□ 0.27
USP48-205ENST00000421625 A0A1W2PPM0 123 aa16.75■□□□□ 0.27
USP48-205ENST00000421625 CIDEAO60543 219 aa16.75■□□□□ 0.27
USP48-205ENST00000421625 PPP1R27Q86WC6 154 aa16.75■□□□□ 0.27
USP48-205ENST00000421625 IFI27L1Q96BM0 104 aa16.75■□□□□ 0.27
USP48-205ENST00000421625 A0A1W2PRD5 423 aa16.75■□□□□ 0.27
USP48-205ENST00000421625 A0A1W2PRF3 423 aa16.75■□□□□ 0.27
USP48-205ENST00000421625 A0A1W2PRM7 423 aa16.75■□□□□ 0.27
USP48-205ENST00000421625 H3BRN7 92 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms