RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 HIGD1AQ9Y241 93 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 CCL26Q9Y258 94 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 MED1Q15648 1581 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 CDK12Q9NYV4 1490 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 DDX60Q8IY21 1712 aaKnown RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 XRN1Q8IZH2 1706 aaKnown RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 RGS12O14924 1447 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 CPSF1Q10570 1443 aaKnown RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 MYH1P12882 1939 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 PIK3C2BO00750 1634 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 MROH1Q8NDA8 1641 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 KIF13BQ9NQT8 1826 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 MUC21A0A0G2JKD1 596 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 TRBV10-2A0A0K0K1G8 114 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 LOC107984640A0A0U1RRK4 108 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 MUC21A0A140T8X8 626 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 TMEM189A5PLL7 270 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 MEIS3P1A6NDR6 274 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 RFPL4AA6NLU0 287 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 RFPL4AL1F8VTS6 287 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 G3V3Q6 166 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 PSCAO43653 123 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 NAPSAO96009 420 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 C1QCP02747 245 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 MT-ND4LP03901 98 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 CTSGP08311 255 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 UCHL1P09936 223 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 GTF2A1P52655 376 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 AQP4P55087 323 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 HIST1H1AQ02539 215 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 EIF3IQ13347 325 aaKnown RBP1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 NNATQ16517 81 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 ZNF181Q2M3W8 571 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 CCDC58Q4VC31 144 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 KHDC3LQ587J8 217 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 BRMS1LQ5PSV4 323 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 BCL2L15Q5TBC7 163 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 LCN15Q6UWW0 184 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 PPTC7Q8NI37 304 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 LZICQ8WZA0 190 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 TMEM106AQ96A25 262 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 ISOC1Q96CN7 298 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 GINS4Q9BRT9 223 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 LAMTOR3Q9UHA4 124 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 EPDR1Q9UM22 224 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 LAMTOR2Q9Y2Q5 125 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 TIMM9Q9Y5J7 89 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 ADGRB3O60242 1522 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 ABCC1P33527 1531 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 NEXMIFQ5QGS0 1516 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 LMTK2Q8IWU2 1503 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 LRRC7Q96NW7 1537 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 TULP4Q9NRJ4 1543 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 AKAP12Q02952 1782 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 RGPD1P0DJD0 1748 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 CD163L1Q9NR16 1453 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 MYH7BA7E2Y1 1941 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 MYH4Q9Y623 1939 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 NSD3Q9BZ95 1437 aa1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 NYNRINQ9P2P1 1898 aaKnown RBP1.48□□□□□ -2.17
HMGB1P49-201ENST00000418882 DOCK4Q8N1I0 1966 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 ABCC3O15438 1527 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 ZFYVE16Q7Z3T8 1539 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 MON2Q7Z3U7 1717 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 FMN2Q9NZ56 1722 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 DENND4CQ5VZ89 1909 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 IGKV1D-42A0A075B6H8 117 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 TMSB15BA0A087X1C1 80 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 OR51F1A6NGY5 319 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 NDUFB3O43676 98 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 LYZL6O75951 148 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 FAM107AO95990 144 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 MPC1LP0DKB6 136 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 HBBP68871 147 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 TPRXLQ17RH7 258 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 MORN2Q502X0 79 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 PCOTHQ58A44 107 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 TEX29Q8N6K0 151 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 PFDN5Q99471 154 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 NPCDR1Q9BY65 106 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 CBLN4Q9NTU7 201 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 PRO2289Q9P1D8 64 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 BAIAP2Q9UQB8 552 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 MRC2Q9UBG0 1479 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 FAM208AQ9UK61 1670 aaKnown RBP1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 PRRC2BQ5JSZ5 2229 aaKnown RBP1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 MYH11P35749 1972 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 SCN9AQ15858 1988 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 KIDINS220Q9ULH0 1771 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 NRKQ7Z2Y5 1582 aa1.47□□□□□ -2.17
HMGB1P49-201ENST00000418882 NALCNQ8IZF0 1738 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 ARHGAP5Q13017 1502 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 MYO5AQ9Y4I1 1855 aaKnown RBP1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 ECM29Q5VYK3 1845 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 IGHV3-64A0A075B6Q5 118 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 BORCS7-ASMTA0A0B4J1R7 106 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 TRAV3A0A0B4J244 114 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 IGHV1-58A0A0C4DH39 117 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 GGCTO75223 188 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms