RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 PPIFP30405 207 aaKnown RBP7.18□□□□□ -1.26
LIG4-202ENST00000405925 TTC9CQ8N5M4 171 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 OR11H1Q8NG94 326 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 OR1N2Q8NGR9 330 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 ASCL2Q99929 193 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 MGAQ8IWI9 3026 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 A0A1B0GUT8 65 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 HIGD1CA8MV81 97 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 OVOL1O14753 267 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 ELANEP08246 267 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 SRIP30626 198 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 HBBP68871 147 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 LINC00479Q96M42 142 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 E7EUB6 86 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 FSTL3O95633 263 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 EMP1P54849 157 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 SSBP2P81877 361 aaPredicted RBP7.18□□□□□ -1.26
LIG4-202ENST00000405925 ZNF56Q15929 161 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 COL6A3P12111 3177 aa7.18□□□□□ -1.26
LIG4-202ENST00000405925 ANKRD17O75179 2603 aaKnown RBP7.17□□□□□ -1.26
LIG4-202ENST00000405925 CD7P09564 240 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 LCN12Q6JVE5 192 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 LRRC75A-AS1Q8N1F1 130 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 C5orf56Q8N8D9 126 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 FER1L6-AS1Q8NA97 138 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 NRN1Q9NPD7 142 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 GOLT1BQ9Y3E0 138 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 TRAV21A0A0B4J279 112 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 IGLV2-23P01705 113 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 BRWD1-AS2P59051 145 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 KRTAP10-9P60411 292 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 DYNAPQ8N1N2 210 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 RPLP1P05386 114 aaKnown RBP7.17□□□□□ -1.26
LIG4-202ENST00000405925 ZNF726P1Q15940 193 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 C1orf229Q6ZS94 237 aaPredicted RBP7.17□□□□□ -1.26
LIG4-202ENST00000405925 OSTCQ9NRP0 149 aa7.17□□□□□ -1.26
LIG4-202ENST00000405925 CENPEQ02224 2701 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 KMT2EQ8IZD2 1858 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 LINC01619G3V211 115 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 ACTL10Q5JWF8 245 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 LINC01551Q86U37 167 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 GTSCR1Q86UQ5 136 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 BPTFQ12830 3046 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 K7EIM0 57 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 NDUFA4O00483 81 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 ZNF138P52744 262 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 PRR20EP86478 221 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 PRR20CP86479 221 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 PRR20DP86480 221 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 PRR20BP86481 221 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 PRR20AP86496 221 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 DEFB136Q30KP8 78 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 TCTEX1D4Q5JR98 221 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 ZNF491Q8N8L2 437 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 IMMP2LQ96T52 175 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 C12orf57Q99622 126 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 PRDM13Q9H4Q3 707 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 TRBV20OR9-2A0A075B6H5 130 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 C9JQL5 133 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 IGHV4-31P0DP07 118 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 DEFB131AP59861 70 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 THAP8Q8NA92 274 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 OR8A1Q8NGG7 326 aa7.16□□□□□ -1.26
LIG4-202ENST00000405925 CPAMD8Q8IZJ3 1885 aa7.15□□□□□ -1.26
LIG4-202ENST00000405925 ODF3BA8MYP8 253 aa7.15□□□□□ -1.26
LIG4-202ENST00000405925 BTF3P20290 206 aaKnown RBP7.15□□□□□ -1.26
LIG4-202ENST00000405925 C12orf54Q6X4T0 127 aa7.15□□□□□ -1.26
LIG4-202ENST00000405925 LYPD1Q8N2G4 141 aa7.15□□□□□ -1.26
LIG4-202ENST00000405925 RNF182Q8N6D2 247 aa7.15□□□□□ -1.26
LIG4-202ENST00000405925 PCSK5Q92824 1860 aa7.15□□□□□ -1.26
LIG4-202ENST00000405925 A0A087WWC5 75 aa7.15□□□□□ -1.26
LIG4-202ENST00000405925 NDUFA3O95167 84 aa7.15□□□□□ -1.26
LIG4-202ENST00000405925 IGKV1-17P01599 117 aa7.15□□□□□ -1.26
LIG4-202ENST00000405925 GZMBP10144 247 aa7.15□□□□□ -1.26
LIG4-202ENST00000405925 PDE6HQ13956 83 aa7.15□□□□□ -1.26
LIG4-202ENST00000405925 PACRGQ96M98 296 aaPredicted RBP7.15□□□□□ -1.26
LIG4-202ENST00000405925 IGLV11-55A0A075B6I3 123 aa7.15□□□□□ -1.27
LIG4-202ENST00000405925 A0A1B0GW64 132 aa7.15□□□□□ -1.27
LIG4-202ENST00000405925 OR11H12B2RN74 326 aa7.15□□□□□ -1.27
LIG4-202ENST00000405925 TEX22C9J3V5 150 aa7.15□□□□□ -1.27
LIG4-202ENST00000405925 PSG3Q16557 428 aa7.15□□□□□ -1.27
LIG4-202ENST00000405925 IQCJQ1A5X6 159 aa7.15□□□□□ -1.27
LIG4-202ENST00000405925 Q6ZN92 141 aa7.15□□□□□ -1.27
LIG4-202ENST00000405925 C1QL4Q86Z23 238 aa7.15□□□□□ -1.27
LIG4-202ENST00000405925 TNFRSF13BO14836 293 aaPredicted RBP7.14□□□□□ -1.27
LIG4-202ENST00000405925 TMEM183BQ1AE95 376 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 Q6AWC8 147 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 TMEM136Q6ZRR5 245 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 TMEM183AQ8IXX5 376 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 KCNS1Q96KK3 526 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 MAP1LC3AQ9H492 121 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 LSM4Q9Y4Z0 139 aaKnown RBP7.14□□□□□ -1.27
LIG4-202ENST00000405925 SOX21Q9Y651 276 aaPredicted RBP7.14□□□□□ -1.27
LIG4-202ENST00000405925 TRBV19A0A075B6N1 114 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 H3BUA1 57 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 RNF224P0DH78 156 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 LEPP41159 167 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 FXYD7P58549 80 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 FAM90A2PQ658T7 463 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 NUDT10Q8NFP7 164 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms