RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 HLA-DRB1P01911 266 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 C1QBP02746 253 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 RLN2P04090 185 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 PET100P0DJ07 73 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 SAA1P0DJI8 122 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 SLC25A4P12235 298 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 PSMB6P28072 239 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 G6PCP35575 357 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 SRP14P37108 136 aaKnown RBP3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 ATP5IP56385 69 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 TAS2R30P59541 319 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 SPCS3P61009 180 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 HSPE1P61604 102 aaKnown RBP3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 TNFRSF9Q07011 255 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR5I1Q13606 314 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 HES1Q14469 280 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 PSG5Q15238 335 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 MMDQ15546 238 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 PRSS8Q16651 343 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 C5orf64Q2M2E5 130 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 DEFB112Q30KQ8 113 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 MAJINQ3KP22 176 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 SSX9Q7RTT3 188 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 ZNF546Q86UE3 836 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 FAM71E2Q8N5Q1 922 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR2T35Q8NGX2 323 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR5B3Q8NH48 314 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR1S1Q8NH92 325 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 HYLS1Q96M11 299 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 CIB3Q96Q77 187 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 C11orf1Q9H5F2 150 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 METTL1Q9UBP6 276 aaKnown RBP3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 SIGLEC9Q9Y336 463 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 TRAV3A0A0B4J244 114 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 TEX50A0A1B0GTY4 177 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 H3BUX3 64 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 CLDN34H7C241 214 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 K7EPK0 472 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 WRBO00258 174 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 SYNGR2O43760 224 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 DEDDO75618 318 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 SIX6O95475 246 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 PVALBP20472 110 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 CD24P25063 80 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 PAX6P26367 422 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 SEC61GP60059 68 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 PRCDQ00LT1 54 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 PRSS54Q6PEW0 395 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 VKORC1L1Q8N0U8 176 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 Q8N9W7 124 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR1L4Q8NGR5 311 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR1L8Q8NGR8 309 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 SMIM8Q96KF7 97 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 COMMD5Q9GZQ3 224 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 FBXL15Q9H469 300 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 ZNF430Q9H8G1 570 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 NDUFA4L2Q9NRX3 87 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 GSKIPQ9P0R6 139 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 VPREB3Q9UKI3 123 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 RCL1Q9Y2P8 373 aaKnown RBP3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR51B2Q9Y5P1 312 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 WSB1Q9Y6I7 421 aa3.2□□□□□ -1.9
HMGB3P19-201ENST00000403971 TRAV14DV4A0A0A6YYC5 116 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 NCBP2LA6PVI3 153 aaKnown RBP3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 CEBPZOSA8MTT3 80 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 CHST1O43916 411 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 CA2P00918 260 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 IFNA17P01571 189 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 IGHG2P01859 326 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 CNTFRP26992 372 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 HTR2BP41595 481 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 RPL27AP46776 148 aaKnown RBP3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR2B8PP59922 312 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 POLR2GP62487 172 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 RPL23AP62750 156 aaKnown RBP3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 ERHP84090 104 aaKnown RBP3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 REG3AQ06141 175 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR2F1Q13607 317 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 ZNF345Q14585 488 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 PLGLAQ15195 96 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 KLK9Q2XQG4 91 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 BSXQ3C1V8 233 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 STPG2Q8N412 459 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 C5orf56Q8N8D9 126 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 DTD1Q8TEA8 209 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 ZNF418Q8TF45 676 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 SRSF12Q8WXF0 261 aaKnown RBP3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 C22orf15Q8WYQ4 148 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 TMEM158Q8WZ71 300 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 AQP10Q96PS8 301 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 SLC25A31Q9H0C2 315 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 LYRM2Q9NU23 88 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 KLK9Q9UKQ9 250 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 SOX21Q9Y651 276 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 U3KQ87 197 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 C2CD3Q4AC94 2353 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 MAST4O15021 2626 aa3.19□□□□□ -1.9
HMGB3P19-201ENST00000403971 A0A0D9SG52 128 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 MDFIC2A0A1B0GVS7 189 aa3.18□□□□□ -1.9
HMGB3P19-201ENST00000403971 IGLC7A0M8Q6 106 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms