RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 FAM223BA6NKX1 122 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 M0QZK8 103 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 GPX1P07203 203 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 SRIP30626 198 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 LINC00310P59036 64 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 CDPF1Q6NVV7 123 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 FAM223AQ8IWN6 122 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 CIARTQ8N365 385 aaPredicted RBP13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 LRBAP50851 2863 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 A0A087X0K7 114 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 CT45A10P0DMU9 189 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 ATP5J2P56134 94 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 RELQ04864 619 aaPredicted RBP13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 LINC00322Q6ZN03 302 aaPredicted RBP13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 KCNS1Q96KK3 526 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 SGK494Q96LW2 274 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 C17orf77Q96MU5 243 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 NAGKQ9UJ70 344 aa13.81□□□□□ -0.2
HLA-DQB1-204ENST00000399084 HAX1O00165 279 aa13.8□□□□□ -0.2
HLA-DQB1-204ENST00000399084 DEFA6Q01524 100 aa13.8□□□□□ -0.2
HLA-DQB1-204ENST00000399084 ECSCRQ19T08 205 aa13.8□□□□□ -0.2
HLA-DQB1-204ENST00000399084 IGHV4-61A0A0C4DH41 118 aa13.79□□□□□ -0.2
HLA-DQB1-204ENST00000399084 H3BUA1 57 aa13.79□□□□□ -0.2
HLA-DQB1-204ENST00000399084 SCGB1D1O95968 90 aa13.79□□□□□ -0.2
HLA-DQB1-204ENST00000399084 DDTP30046 118 aa13.79□□□□□ -0.2
HLA-DQB1-204ENST00000399084 SLAQ13239 276 aa13.79□□□□□ -0.2
HLA-DQB1-204ENST00000399084 OR2D3Q8NGH3 330 aa13.79□□□□□ -0.2
HLA-DQB1-204ENST00000399084 CLEC5AQ9NY25 188 aa13.79□□□□□ -0.2
HLA-DQB1-204ENST00000399084 S4R3C0 116 aa13.79□□□□□ -0.2
HLA-DQB1-204ENST00000399084 TRAV8-1A0A0A6YYK1 113 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 CLEC3BP05452 202 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 C19orf54Q5BKX5 351 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 TOMM20LQ6UXN7 152 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 GTSF1Q8WW33 167 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 A0A1B0GUS0 222 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 IGF1P05019 195 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 ATP5G2Q06055 141 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 GATD1Q8NB37 220 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 C18orf32Q8TCD1 76 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 SLC50A1Q9BRV3 221 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 ALKBH7Q9BT30 221 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 ZFAND3Q9H8U3 227 aa13.78□□□□□ -0.2
HLA-DQB1-204ENST00000399084 SETXQ7Z333 2677 aaKnown RBP13.77□□□□□ -0.2
HLA-DQB1-204ENST00000399084 WNK2Q9Y3S1 2297 aa13.77□□□□□ -0.2
HLA-DQB1-204ENST00000399084 TRAV41A0A0B4J266 112 aa13.77□□□□□ -0.21
HLA-DQB1-204ENST00000399084 A0A1W2PS18 150 aa13.77□□□□□ -0.21
HLA-DQB1-204ENST00000399084 ZNF324O75467 553 aaPredicted RBP13.77□□□□□ -0.21
HLA-DQB1-204ENST00000399084 MSMBP08118 114 aa13.77□□□□□ -0.21
HLA-DQB1-204ENST00000399084 RAB4AP20338 218 aa13.77□□□□□ -0.21
HLA-DQB1-204ENST00000399084 RIGQ13278 110 aa13.77□□□□□ -0.21
HLA-DQB1-204ENST00000399084 KIAA1644Q3SXP7 199 aa13.77□□□□□ -0.21
HLA-DQB1-204ENST00000399084 TCF24Q7RTU0 167 aa13.77□□□□□ -0.21
HLA-DQB1-204ENST00000399084 ZNF664Q8N3J9 261 aa13.77□□□□□ -0.21
HLA-DQB1-204ENST00000399084 PIFOQ8TCI5 191 aa13.77□□□□□ -0.21
HLA-DQB1-204ENST00000399084 NDFIP1Q9BT67 221 aa13.77□□□□□ -0.21
HLA-DQB1-204ENST00000399084 RBAKDNA6NC62 111 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 B4DSR2 109 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 BUB3O43684 328 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 SLC25A16P16260 332 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 GPR183P32249 361 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 CAMPP49913 170 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 SRSF2Q01130 221 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 ZC2HC1AQ96GY0 325 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 GCN1Q92616 2671 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 TRAV20A0A0B4J274 112 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 A0A1B0GUT8 65 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 BMI1P35226 326 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 RPS20P60866 119 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 GDF5OSQ5U4N7 250 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 Q6ZWC4 215 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 MRPL53Q96EL3 112 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 PGLYRP4Q96LB8 373 aa13.76□□□□□ -0.21
HLA-DQB1-204ENST00000399084 IGHV3-23P01764 117 aa13.75□□□□□ -0.21
HLA-DQB1-204ENST00000399084 AMTP48728 403 aa13.75□□□□□ -0.21
HLA-DQB1-204ENST00000399084 LBHQ53QV2 105 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQB1-204ENST00000399084 REC114Q7Z4M0 266 aa13.75□□□□□ -0.21
HLA-DQB1-204ENST00000399084 BORCS7Q96B45 105 aa13.75□□□□□ -0.21
HLA-DQB1-204ENST00000399084 USMG5Q96IX5 58 aa13.75□□□□□ -0.21
HLA-DQB1-204ENST00000399084 METTL26Q96S19 204 aa13.75□□□□□ -0.21
HLA-DQB1-204ENST00000399084 DCHS2Q6V1P9 2916 aa13.74□□□□□ -0.21
HLA-DQB1-204ENST00000399084 ITPR1Q14643 2758 aa13.74□□□□□ -0.21
HLA-DQB1-204ENST00000399084 TRAV40A0A0B4J280 105 aa13.74□□□□□ -0.21
HLA-DQB1-204ENST00000399084 SH2D7A6NKC9 451 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-204ENST00000399084 CHEK1O14757 476 aa13.74□□□□□ -0.21
HLA-DQB1-204ENST00000399084 BCL6BQ8N143 479 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-204ENST00000399084 CCDC140Q96MF4 163 aa13.74□□□□□ -0.21
HLA-DQB1-204ENST00000399084 HIF1ANQ9NWT6 349 aa13.74□□□□□ -0.21
HLA-DQB1-204ENST00000399084 ZNF580Q9UK33 172 aa13.74□□□□□ -0.21
HLA-DQB1-204ENST00000399084 SMAD5-AS1Q9Y6J3 95 aa13.74□□□□□ -0.21
HLA-DQB1-204ENST00000399084 ZNF785A8K8V0 405 aa13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 G3V318 75 aa13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 M0R3E3 92 aa13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 APOHP02749 345 aaPredicted RBP13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 C9orf152Q5JTZ5 239 aa13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 TEX43Q6ZNM6 134 aa13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 NRN1Q9NPD7 142 aa13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 U3KQE9 123 aa13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 IGHG2P01859 326 aa13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 PMCHP20382 165 aa13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms