RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MRPL57Q9BQC6 102 aaKnown RBP0.69□□□□□ -2.3
CD47-203ENST00000398258 GGACTQ9BVM4 153 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 RTL8AQ9BWD3 113 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 MAP1LC3BQ9GZQ8 125 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 CACYBPQ9HB71 228 aaKnown RBP0.69□□□□□ -2.3
CD47-203ENST00000398258 MRPL40Q9NQ50 206 aaKnown RBP0.69□□□□□ -2.3
CD47-203ENST00000398258 OTORQ9NRC9 128 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 ZFP30Q9Y2G7 519 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 ASB4Q9Y574 426 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 TNS3Q68CZ2 1445 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 FGD6Q6ZV73 1430 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 CNTLNQ9NXG0 1405 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 CUX1P39880 1505 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 EXPH5Q8NEV8 1989 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 FYCO1Q9BQS8 1478 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 FANCD2Q9BXW9 1451 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 LRP5O75197 1615 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 RAPGEF6Q8TEU7 1601 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 DLG5Q8TDM6 1919 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 A0A087WSZ3 146 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 TRBV6-7A0A0A0MS04 114 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 TRAV10A0A0B4J240 114 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 GPR31O00270 319 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 DNAL4O96015 105 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 IFNA21P01568 189 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 OR10J4P0C629 311 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 ZNF25P17030 456 aaPredicted RBP0.68□□□□□ -2.3
CD47-203ENST00000398258 DEFB115Q30KQ5 88 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 TTC37Q6PGP7 1564 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 C4orf22Q6V702 233 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 ANGPTL5Q86XS5 388 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 GRPEL2Q8TAA5 225 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 POP5Q969H6 163 aaKnown RBP0.68□□□□□ -2.3
CD47-203ENST00000398258 BORCS5Q969J3 196 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 RAB37Q96AX2 223 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 PLEKHB2Q96CS7 222 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 OBSCN-AS1Q96MR7 158 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 NAT8BQ9UHF3 227 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 C22orf24Q9Y442 160 aa0.68□□□□□ -2.3
CD47-203ENST00000398258 EPRSP07814 1512 aaKnown RBP0.68□□□□□ -2.3
CD47-203ENST00000398258 CDK13Q14004 1512 aaKnown RBP0.68□□□□□ -2.3
CD47-203ENST00000398258 TRPM1Q7Z4N2 1603 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 OBSL1O75147 1896 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 DIP2BQ9P265 1576 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 ABCC5O15440 1437 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 KDM6AO15550 1401 aaPredicted RBP0.67□□□□□ -2.3
CD47-203ENST00000398258 YTHDC2Q9H6S0 1430 aaKnown RBP0.67□□□□□ -2.3
CD47-203ENST00000398258 TAF1LQ8IZX4 1826 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 A0A1B0GV72 72 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 A0A1W2PRE2 83 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 OR2T8A6NH00 312 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 E7EUB6 86 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 H0YJX3 145 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 CCL25O15444 150 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 CCL16O15467 120 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 CST7O76096 145 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 IGLV1-51P01701 117 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 RAB5CP51148 216 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 DSCR4P56555 118 aaPredicted RBP0.67□□□□□ -2.3
CD47-203ENST00000398258 HBBP68871 147 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 CDK6Q00534 326 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 KLRD1Q13241 179 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 EIF3IQ13347 325 aaKnown RBP0.67□□□□□ -2.3
CD47-203ENST00000398258 FAM74A1Q5RGS3 127 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 C2orf82Q6UX34 121 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 ZNF833PQ6ZTB9 187 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 OR5D16Q8NGK9 328 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 Q8TAT8 98 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 BORCS8Q96FH0 119 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 RMND5BQ96G75 393 aaPredicted RBP0.67□□□□□ -2.3
CD47-203ENST00000398258 CCDC32Q9BV29 185 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 ATPIF1Q9UII2 106 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 NUBP2Q9Y5Y2 271 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 ROS1P08922 2347 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 EFCAB5A4FU69 1503 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 KDM5DQ9BY66 1539 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 RNF17Q9BXT8 1623 aaKnown RBP0.67□□□□□ -2.3
CD47-203ENST00000398258 A2ML1A8K2U0 1454 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 MAGI2Q86UL8 1455 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 RALGAPBQ86X10 1494 aa0.67□□□□□ -2.3
CD47-203ENST00000398258 SYNMO15061 1565 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 EIF4G3O43432 1585 aaKnown RBP0.66□□□□□ -2.3
CD47-203ENST00000398258 ABCA8O94911 1581 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 TRAPPC8Q9Y2L5 1435 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.66□□□□□ -2.3
CD47-203ENST00000398258 LRRC7Q96NW7 1537 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 DLC1Q96QB1 1528 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 C17orf112F2Z3M2 114 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 F8W1H4 67 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 H3BQV1 296 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 GABARAPH6UMI1 98 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 H7BYZ3 331 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 HIST1H2BKO60814 126 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 KLF7O75840 302 aaPredicted RBP0.66□□□□□ -2.3
CD47-203ENST00000398258 ERC2-IT1O76042 136 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 MT-ND6P03923 174 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 IFNA4P05014 189 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 HIST1H2BJP06899 126 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 B2MP61769 119 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 MPV17LQ2QL34 196 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms