RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 FAM240BA0A1B0GVZ2 78 aa12.21□□□□□ -0.45
EXOSC3-202ENST00000396521 PLA2G10O15496 165 aa12.21□□□□□ -0.45
EXOSC3-202ENST00000396521 RAP2BP61225 183 aa12.21□□□□□ -0.45
EXOSC3-202ENST00000396521 TMEM128Q5BJH2 165 aa12.21□□□□□ -0.45
EXOSC3-202ENST00000396521 BAP18Q8IXM2 172 aa12.21□□□□□ -0.45
EXOSC3-202ENST00000396521 C20orf144Q9BQM9 153 aa12.21□□□□□ -0.45
EXOSC3-202ENST00000396521 C20orf85Q9H1P6 137 aa12.21□□□□□ -0.45
EXOSC3-202ENST00000396521 Q9H3A6 140 aa12.21□□□□□ -0.45
EXOSC3-202ENST00000396521 TRAV8-2A0A0B4J237 113 aa12.2□□□□□ -0.46
EXOSC3-202ENST00000396521 H3BNG1 76 aa12.2□□□□□ -0.46
EXOSC3-202ENST00000396521 AZU1P20160 251 aa12.2□□□□□ -0.46
EXOSC3-202ENST00000396521 M6PRP20645 277 aa12.2□□□□□ -0.46
EXOSC3-202ENST00000396521 RHOBP62745 196 aa12.2□□□□□ -0.46
EXOSC3-202ENST00000396521 FGL1Q08830 312 aa12.2□□□□□ -0.46
EXOSC3-202ENST00000396521 LRTM2Q8N967 370 aa12.2□□□□□ -0.46
EXOSC3-202ENST00000396521 OR8A1Q8NGG7 326 aa12.2□□□□□ -0.46
EXOSC3-202ENST00000396521 TMEM263Q8WUH6 116 aaKnown RBP12.2□□□□□ -0.46
EXOSC3-202ENST00000396521 GNPNAT1Q96EK6 184 aaPredicted RBP12.2□□□□□ -0.46
EXOSC3-202ENST00000396521 UPK3BQ9BT76 320 aa12.2□□□□□ -0.46
EXOSC3-202ENST00000396521 PRSS46E5RG02 174 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 H7BYZ3 331 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 SYNGR2O43760 224 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 PRM2P04554 102 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 IAPPP10997 89 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 UBE2MP61081 183 aaKnown RBP12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 SELENOTP62341 195 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 AKR1C1Q04828 323 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 FCN2Q15485 313 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 RNF182Q8N6D2 247 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 RXFP4Q8TDU9 374 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 SHANK2-AS3Q9BTD1 123 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 SLC25A39Q9BZJ4 359 aaPredicted RBP12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 NUDT15Q9NV35 164 aa12.19□□□□□ -0.46
EXOSC3-202ENST00000396521 TRAV12-2A0A075B6T6 113 aa12.18□□□□□ -0.46
EXOSC3-202ENST00000396521 TRAV6A0A075B6T7 132 aa12.18□□□□□ -0.46
EXOSC3-202ENST00000396521 H3BRN7 92 aa12.18□□□□□ -0.46
EXOSC3-202ENST00000396521 CDKN1BP46527 198 aa12.18□□□□□ -0.46
EXOSC3-202ENST00000396521 HIST1H1AQ02539 215 aaPredicted RBP12.18□□□□□ -0.46
EXOSC3-202ENST00000396521 C4orf46Q504U0 113 aa12.18□□□□□ -0.46
EXOSC3-202ENST00000396521 LRRC20Q8TCA0 184 aa12.18□□□□□ -0.46
EXOSC3-202ENST00000396521 RNASE8Q8TDE3 154 aaKnown RBP12.18□□□□□ -0.46
EXOSC3-202ENST00000396521 FLVCR2Q9UPI3 526 aa12.18□□□□□ -0.46
EXOSC3-202ENST00000396521 HIGD1AQ9Y241 93 aa12.18□□□□□ -0.46
EXOSC3-202ENST00000396521 A0A087X0K7 114 aa12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 HYPMO75409 117 aa12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 TCRBP04435 133 aa12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 IL5P05113 134 aa12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 CXCL3P19876 107 aa12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 ANXA7P20073 488 aaKnown RBP12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 PLP1P60201 277 aa12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 IFITM3Q01628 133 aa12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 PPP1R1AQ13522 171 aa12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 PSG3Q16557 428 aa12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 CCDC28AQ8IWP9 274 aa12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 NOP10Q9NPE3 64 aaKnown RBP12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 STRAPQ9Y3F4 350 aaKnown RBP12.17□□□□□ -0.46
EXOSC3-202ENST00000396521 DNAH5Q8TE73 4624 aa12.16□□□□□ -0.46
EXOSC3-202ENST00000396521 SFT2D2O95562 160 aa12.16□□□□□ -0.46
EXOSC3-202ENST00000396521 HTN1P15515 57 aa12.16□□□□□ -0.46
EXOSC3-202ENST00000396521 CXCL2P19875 107 aa12.16□□□□□ -0.46
EXOSC3-202ENST00000396521 GATA2P23769 480 aaPredicted RBP12.16□□□□□ -0.46
EXOSC3-202ENST00000396521 OR5I1Q13606 314 aa12.16□□□□□ -0.46
EXOSC3-202ENST00000396521 IGFL4Q6B9Z1 124 aa12.16□□□□□ -0.46
EXOSC3-202ENST00000396521 TRAV26-1A0A087WT03 109 aa12.15□□□□□ -0.46
EXOSC3-202ENST00000396521 WRBO00258 174 aa12.15□□□□□ -0.46
EXOSC3-202ENST00000396521 H2AFB2P0C5Z0 115 aa12.15□□□□□ -0.46
EXOSC3-202ENST00000396521 OR4E1P0C645 316 aa12.15□□□□□ -0.46
EXOSC3-202ENST00000396521 SPANXN5Q5MJ07 72 aa12.15□□□□□ -0.46
EXOSC3-202ENST00000396521 TMEM182Q6ZP80 229 aaPredicted RBP12.15□□□□□ -0.46
EXOSC3-202ENST00000396521 CYP2G1PQ6ZSU1 146 aa12.15□□□□□ -0.46
EXOSC3-202ENST00000396521 ACOT7LQ6ZUV0 252 aa12.15□□□□□ -0.46
EXOSC3-202ENST00000396521 LINC00612Q8N6U2 182 aa12.15□□□□□ -0.46
EXOSC3-202ENST00000396521 PGPEP1Q9NXJ5 209 aa12.15□□□□□ -0.46
EXOSC3-202ENST00000396521 MRPS16Q9Y3D3 137 aaKnown RBP12.15□□□□□ -0.46
EXOSC3-202ENST00000396521 PXDC1Q5TGL8 231 aa12.14□□□□□ -0.47
EXOSC3-202ENST00000396521 RPUSD4Q96CM3 377 aaKnown RBP12.14□□□□□ -0.47
EXOSC3-202ENST00000396521 APOBP04114 4563 aaKnown RBP12.14□□□□□ -0.47
EXOSC3-202ENST00000396521 C9orf170A2RU37 121 aa12.13□□□□□ -0.47
EXOSC3-202ENST00000396521 EPM2AB3EWF7 344 aa12.13□□□□□ -0.47
EXOSC3-202ENST00000396521 RLN2P04090 185 aa12.13□□□□□ -0.47
EXOSC3-202ENST00000396521 OR5G3P0C626 314 aa12.13□□□□□ -0.47
EXOSC3-202ENST00000396521 LCN15Q6UWW0 184 aa12.13□□□□□ -0.47
EXOSC3-202ENST00000396521 NRARPQ7Z6K4 114 aa12.13□□□□□ -0.47
EXOSC3-202ENST00000396521 SLC50A1Q9BRV3 221 aa12.13□□□□□ -0.47
EXOSC3-202ENST00000396521 DMBT1Q9UGM3 2413 aaPredicted RBP12.12□□□□□ -0.47
EXOSC3-202ENST00000396521 SNURFLB1AK76 121 aa12.12□□□□□ -0.47
EXOSC3-202ENST00000396521 FNDC10F2Z333 226 aa12.12□□□□□ -0.47
EXOSC3-202ENST00000396521 K7EPK0 472 aa12.12□□□□□ -0.47
EXOSC3-202ENST00000396521 EREGO14944 169 aa12.12□□□□□ -0.47
EXOSC3-202ENST00000396521 LINC00869P0C866 280 aa12.12□□□□□ -0.47
EXOSC3-202ENST00000396521 KRTAP10-2P60368 255 aa12.12□□□□□ -0.47
EXOSC3-202ENST00000396521 ESRGQ1W209 222 aa12.12□□□□□ -0.47
EXOSC3-202ENST00000396521 KRTAP1-5Q9BYS1 174 aa12.12□□□□□ -0.47
EXOSC3-202ENST00000396521 SMCO3A2RU48 225 aa12.11□□□□□ -0.47
EXOSC3-202ENST00000396521 PTTG1O95997 202 aa12.11□□□□□ -0.47
EXOSC3-202ENST00000396521 CDPF1Q6NVV7 123 aa12.11□□□□□ -0.47
EXOSC3-202ENST00000396521 NPVFQ9HCQ7 196 aa12.11□□□□□ -0.47
EXOSC3-202ENST00000396521 ID3Q02535 119 aa12.1□□□□□ -0.47
EXOSC3-202ENST00000396521 DAZ2Q13117 558 aaKnown RBP12.1□□□□□ -0.47
EXOSC3-202ENST00000396521 SEC22CQ9BRL7 303 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms