RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 TOMM40O96008 361 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 APOHP02749 345 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-203ENST00000394419 RIGQ13278 110 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 C16orf54Q6UWD8 224 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 TMEM191AQ9H0A3 160 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 PSG8Q9UQ74 426 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 TRAV9-2A0A087WT02 112 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 J3KRW8 73 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 OR5AL1P0C617 328 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 IGLL1P15814 213 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 FAM231DQ6ZW35 169 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 ZNF207O43670 478 aaKnown RBP8.37□□□□□ -1.07
ACTN1-203ENST00000394419 ESDP10768 282 aa8.37□□□□□ -1.07
ACTN1-203ENST00000394419 GP9P14770 177 aa8.37□□□□□ -1.07
ACTN1-203ENST00000394419 FAM162BQ5T6X4 162 aa8.37□□□□□ -1.07
ACTN1-203ENST00000394419 Q86TA4 180 aa8.37□□□□□ -1.07
ACTN1-203ENST00000394419 Q8TAT8 98 aa8.37□□□□□ -1.07
ACTN1-203ENST00000394419 RNF24Q9Y225 148 aa8.37□□□□□ -1.07
ACTN1-203ENST00000394419 IGKV2-40A0A087WW87 121 aaPredicted RBP8.37□□□□□ -1.07
ACTN1-203ENST00000394419 IGKV2D-40P01614 121 aaPredicted RBP8.37□□□□□ -1.07
ACTN1-203ENST00000394419 NHLH1Q02575 133 aa8.37□□□□□ -1.07
ACTN1-203ENST00000394419 MRPL27Q9P0M9 148 aaKnown RBP8.37□□□□□ -1.07
ACTN1-203ENST00000394419 IGKV1-17P01599 117 aa8.37□□□□□ -1.07
ACTN1-203ENST00000394419 TSPOP30536 169 aa8.37□□□□□ -1.07
ACTN1-203ENST00000394419 MFAP4P55083 255 aa8.37□□□□□ -1.07
ACTN1-203ENST00000394419 AP5S1Q9NUS5 200 aa8.37□□□□□ -1.07
ACTN1-203ENST00000394419 USP9YO00507 2555 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-203ENST00000394419 IGHV3OR16-10A0A075B7F0 116 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 TMEM189A5PLL7 270 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 NUDT3O95989 172 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 PPIFP30405 207 aaKnown RBP8.36□□□□□ -1.07
ACTN1-203ENST00000394419 FAM71F2Q6NXP2 309 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 BCL6BQ8N143 479 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-203ENST00000394419 ZC2HC1AQ96GY0 325 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 VKORC1Q9BQB6 163 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 KAAG1Q9UBP8 84 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 SVEP1Q4LDE5 3571 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 NPIPB5A8MRT5 1133 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 TEX22C9J3V5 150 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 IGLV1-47P01700 117 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 PAX1P15863 534 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 DLX6P56179 175 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 TWIST1Q15672 202 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 Q5PR19 223 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 C8orf49Q96NF6 230 aa8.36□□□□□ -1.07
ACTN1-203ENST00000394419 IGKV3-7A0A075B6H7 116 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 ATP5L2Q7Z4Y8 100 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 S100A7AQ86SG5 101 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 VPS25Q9BRG1 176 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 C21orf62Q9NYP8 219 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 THYN1Q9P016 225 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 NDUFS7O75251 213 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 TNFRSF14Q92956 283 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 MBD6Q96DN6 1003 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 UBTD1Q9HAC8 227 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 IGHV1-24A0A0C4DH33 117 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 GPR183P32249 361 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 RASL11AQ6T310 242 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 ARPC1AQ92747 370 aa8.35□□□□□ -1.07
ACTN1-203ENST00000394419 CENPEQ02224 2701 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 SCGB2A1O75556 95 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 LTAP01374 205 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 UQCRFS1P47985 274 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 RPL11P62913 178 aaKnown RBP8.34□□□□□ -1.07
ACTN1-203ENST00000394419 IGF2-ASQ6U949 168 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 OR4C5Q8NGB2 326 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 LINC00527Q9UJ94 153 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 SORL1Q92673 2214 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 TMEM213A2RRL7 107 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 SMKR1H3BMG3 65 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 SYS1-DBNDD2H3BUS1 97 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 MPV17L2Q567V2 206 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 C18orf15Q96N68 181 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 HSPB8Q9UJY1 196 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 RAXQ9Y2V3 346 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 TRBV19A0A075B6N1 114 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 I3L2K1 104 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 NCR2O95944 276 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 CKS2P33552 79 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 SLC25A34Q6PIV7 304 aa8.34□□□□□ -1.07
ACTN1-203ENST00000394419 K7EIM0 57 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 CRYGCP07315 174 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 HLA-DMBP28068 263 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 LYZL1Q6UWQ5 148 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 ZNF491Q8N8L2 437 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 Q8N976 141 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 ZNF738Q8NE65 137 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 AP1S3Q96PC3 154 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 SHANK2-AS3Q9BTD1 123 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 C5orf64Q2M2E5 130 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 LDLRAD2Q5SZI1 272 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 AMN1Q8IY45 258 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 D6R8Y8 96 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 INS-IGF2F8WCM5 200 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 RBX1P62877 108 aa8.33□□□□□ -1.08
ACTN1-203ENST00000394419 WIPF2Q8TF74 440 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-203ENST00000394419 DCHS2Q6V1P9 2916 aa8.32□□□□□ -1.08
ACTN1-203ENST00000394419 NDUFB8O95169 186 aa8.32□□□□□ -1.08
ACTN1-203ENST00000394419 TMEM75Q8N9X5 138 aa8.32□□□□□ -1.08
ACTN1-203ENST00000394419 NDFIP1Q9BT67 221 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms