RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 FABP2P12104 132 aa13.27□□□□□ -0.29
SCN3B-202ENST00000392770 C8orf31Q8N9H6 132 aa13.27□□□□□ -0.29
SCN3B-202ENST00000392770 TPRP12270 2363 aaKnown RBP13.27□□□□□ -0.29
SCN3B-202ENST00000392770 LOC107984156A0A0G2JMH3 177 aa13.27□□□□□ -0.29
SCN3B-202ENST00000392770 ARL17AQ8IVW1 177 aa13.27□□□□□ -0.29
SCN3B-202ENST00000392770 TRAV12-3A0A0B4J271 114 aa13.27□□□□□ -0.29
SCN3B-202ENST00000392770 NXT2Q9NPJ8 142 aaKnown RBP13.27□□□□□ -0.29
SCN3B-202ENST00000392770 HIST3H2BBQ8N257 126 aa13.26□□□□□ -0.29
SCN3B-202ENST00000392770 ALKBH7Q9BT30 221 aaPredicted RBP13.26□□□□□ -0.29
SCN3B-202ENST00000392770 ERASQ7Z444 233 aa13.26□□□□□ -0.29
SCN3B-202ENST00000392770 SMIM12Q96EX1 92 aa13.26□□□□□ -0.29
SCN3B-202ENST00000392770 HIST1H2BLQ99880 126 aa13.26□□□□□ -0.29
SCN3B-202ENST00000392770 D6R8Y8 96 aa13.26□□□□□ -0.29
SCN3B-202ENST00000392770 HTN3P15516 51 aa13.26□□□□□ -0.29
SCN3B-202ENST00000392770 SYNJ2BPP57105 145 aa13.26□□□□□ -0.29
SCN3B-202ENST00000392770 RNF182Q8N6D2 247 aa13.26□□□□□ -0.29
SCN3B-202ENST00000392770 ARL6IP6Q8N6S5 226 aa13.26□□□□□ -0.29
SCN3B-202ENST00000392770 NCR2O95944 276 aa13.26□□□□□ -0.29
SCN3B-202ENST00000392770 TECTAO75443 2155 aa13.25□□□□□ -0.29
SCN3B-202ENST00000392770 GAGE10A6NGK3 116 aa13.25□□□□□ -0.29
SCN3B-202ENST00000392770 IL15RAQ13261 267 aa13.25□□□□□ -0.29
SCN3B-202ENST00000392770 PDE6HQ13956 83 aa13.25□□□□□ -0.29
SCN3B-202ENST00000392770 DMRTC2Q8IXT2 367 aaPredicted RBP13.25□□□□□ -0.29
SCN3B-202ENST00000392770 J3QKU1 62 aa13.25□□□□□ -0.29
SCN3B-202ENST00000392770 TMEM75Q8N9X5 138 aa13.25□□□□□ -0.29
SCN3B-202ENST00000392770 SSBP2P81877 361 aaPredicted RBP13.24□□□□□ -0.29
SCN3B-202ENST00000392770 PRDM13Q9H4Q3 707 aa13.24□□□□□ -0.29
SCN3B-202ENST00000392770 J3QLI3 93 aa13.24□□□□□ -0.29
SCN3B-202ENST00000392770 PRB1P04280 392 aa13.23□□□□□ -0.29
SCN3B-202ENST00000392770 IL17RELQ6ZVW7 336 aa13.23□□□□□ -0.29
SCN3B-202ENST00000392770 COPS9Q8WXC6 57 aa13.23□□□□□ -0.29
SCN3B-202ENST00000392770 NUP210LQ5VU65 1888 aa13.23□□□□□ -0.29
SCN3B-202ENST00000392770 CMC4P56277 68 aaPredicted RBP13.23□□□□□ -0.29
SCN3B-202ENST00000392770 POU2AF1Q16633 256 aa13.23□□□□□ -0.29
SCN3B-202ENST00000392770 C8orf49Q96NF6 230 aa13.23□□□□□ -0.29
SCN3B-202ENST00000392770 RCHY1Q96PM5 261 aa13.23□□□□□ -0.29
SCN3B-202ENST00000392770 APC2O95996 2303 aa13.23□□□□□ -0.29
SCN3B-202ENST00000392770 ORMDL2Q53FV1 153 aa13.23□□□□□ -0.29
SCN3B-202ENST00000392770 RTTNQ86VV8 2226 aa13.23□□□□□ -0.29
SCN3B-202ENST00000392770 CEP192Q8TEP8 1941 aa13.22□□□□□ -0.29
SCN3B-202ENST00000392770 COX6CP09669 75 aa13.22□□□□□ -0.29
SCN3B-202ENST00000392770 AMBPP02760 352 aa13.22□□□□□ -0.29
SCN3B-202ENST00000392770 H3BRN7 92 aa13.22□□□□□ -0.29
SCN3B-202ENST00000392770 IFI27P40305 119 aaPredicted RBP13.22□□□□□ -0.29
SCN3B-202ENST00000392770 CR1LQ2VPA4 569 aa13.22□□□□□ -0.29
SCN3B-202ENST00000392770 THAP8Q8NA92 274 aa13.22□□□□□ -0.29
SCN3B-202ENST00000392770 IGFBPL1Q8WX77 278 aa13.22□□□□□ -0.29
SCN3B-202ENST00000392770 H3BRM9 83 aa13.22□□□□□ -0.29
SCN3B-202ENST00000392770 SRCAPQ6ZRS2 3230 aa13.22□□□□□ -0.29
SCN3B-202ENST00000392770 ESPL1Q14674 2120 aa13.21□□□□□ -0.29
SCN3B-202ENST00000392770 TRBV19A0A075B6N1 114 aa13.21□□□□□ -0.29
SCN3B-202ENST00000392770 IGHV3-73A0A0B4J1V6 119 aa13.21□□□□□ -0.29
SCN3B-202ENST00000392770 SMIM13P0DJ93 91 aa13.21□□□□□ -0.29
SCN3B-202ENST00000392770 Q8NA96 180 aa13.21□□□□□ -0.29
SCN3B-202ENST00000392770 JKAMPQ9P055 326 aa13.21□□□□□ -0.29
SCN3B-202ENST00000392770 K7ERU9 68 aa13.21□□□□□ -0.29
SCN3B-202ENST00000392770 CYSLTR1Q9Y271 337 aa13.21□□□□□ -0.29
SCN3B-202ENST00000392770 TRGV4A0A0C4DH28 118 aa13.21□□□□□ -0.3
SCN3B-202ENST00000392770 SPTBN2O15020 2390 aa13.21□□□□□ -0.3
SCN3B-202ENST00000392770 LAGE3Q14657 143 aa13.21□□□□□ -0.3
SCN3B-202ENST00000392770 TTC9CQ8N5M4 171 aa13.21□□□□□ -0.3
SCN3B-202ENST00000392770 CEP250Q9BV73 2442 aa13.21□□□□□ -0.3
SCN3B-202ENST00000392770 RPL35AP18077 110 aaKnown RBP13.2□□□□□ -0.3
SCN3B-202ENST00000392770 C1orf122Q6ZSJ8 110 aa13.2□□□□□ -0.3
SCN3B-202ENST00000392770 VCX2Q9H322 139 aa13.2□□□□□ -0.3
SCN3B-202ENST00000392770 ALPK3Q96L96 1907 aa13.2□□□□□ -0.3
SCN3B-202ENST00000392770 LINC01619G3V211 115 aa13.2□□□□□ -0.3
SCN3B-202ENST00000392770 MRAP2Q96G30 205 aa13.2□□□□□ -0.3
SCN3B-202ENST00000392770 GFRA4Q9GZZ7 299 aa13.2□□□□□ -0.3
SCN3B-202ENST00000392770 ACACAQ13085 2346 aa13.2□□□□□ -0.3
SCN3B-202ENST00000392770 A0A1B0GV90 55 aa13.19□□□□□ -0.3
SCN3B-202ENST00000392770 GGTLC3B5MD39 225 aa13.19□□□□□ -0.3
SCN3B-202ENST00000392770 CHTOPQ9Y3Y2 248 aaKnown RBP13.19□□□□□ -0.3
SCN3B-202ENST00000392770 OR11H6Q8NGC7 330 aa13.19□□□□□ -0.3
SCN3B-202ENST00000392770 GVINP1Q7Z2Y8 2422 aa13.19□□□□□ -0.3
SCN3B-202ENST00000392770 DPM2O94777 84 aa13.19□□□□□ -0.3
SCN3B-202ENST00000392770 TMEM249Q2WGJ8 235 aa13.19□□□□□ -0.3
SCN3B-202ENST00000392770 TMEM256Q8N2U0 113 aa13.19□□□□□ -0.3
SCN3B-202ENST00000392770 TRAV9-2A0A087WT02 112 aa13.18□□□□□ -0.3
SCN3B-202ENST00000392770 ZNF415Q09FC8 603 aa13.18□□□□□ -0.3
SCN3B-202ENST00000392770 TMEM14CQ9P0S9 112 aa13.18□□□□□ -0.3
SCN3B-202ENST00000392770 DPH3P1Q9H4G8 78 aa13.18□□□□□ -0.3
SCN3B-202ENST00000392770 ZNF492Q9P255 531 aa13.18□□□□□ -0.3
SCN3B-202ENST00000392770 PCDH15Q96QU1 1955 aa13.18□□□□□ -0.3
SCN3B-202ENST00000392770 IGLC1P0CG04 106 aa13.18□□□□□ -0.3
SCN3B-202ENST00000392770 RITA1Q96K30 269 aa13.18□□□□□ -0.3
SCN3B-202ENST00000392770 IGKV3D-20A0A0C4DH25 116 aa13.17□□□□□ -0.3
SCN3B-202ENST00000392770 IGLC7A0M8Q6 106 aa13.17□□□□□ -0.3
SCN3B-202ENST00000392770 C10orf142B7Z368 130 aa13.17□□□□□ -0.3
SCN3B-202ENST00000392770 CD28P10747 220 aa13.17□□□□□ -0.3
SCN3B-202ENST00000392770 DEFB104AQ8WTQ1 72 aa13.17□□□□□ -0.3
SCN3B-202ENST00000392770 IFI27L1Q96BM0 104 aa13.17□□□□□ -0.3
SCN3B-202ENST00000392770 IGKCP01834 107 aa13.17□□□□□ -0.3
SCN3B-202ENST00000392770 NDUFA4O00483 81 aa13.17□□□□□ -0.3
SCN3B-202ENST00000392770 MSMPQ1L6U9 139 aa13.17□□□□□ -0.3
SCN3B-202ENST00000392770 INSP01308 110 aa13.16□□□□□ -0.3
SCN3B-202ENST00000392770 HOXA3O43365 443 aaPredicted RBP13.16□□□□□ -0.3
SCN3B-202ENST00000392770 C8orf86Q6ZUL3 223 aa13.16□□□□□ -0.3
SCN3B-202ENST00000392770 C14orf178Q8N769 122 aaPredicted RBP13.16□□□□□ -0.3
SCN3B-202ENST00000392770 SMKR1H3BMG3 65 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms