RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 OVOL1O14753 267 aa16.01■□□□□ 0.15
SHANK1-203ENST00000391813 IGKV1-39P01597 117 aa16.01■□□□□ 0.15
SHANK1-203ENST00000391813 IGKV1D-39P04432 117 aa16.01■□□□□ 0.15
SHANK1-203ENST00000391813 TCF15Q12870 199 aa16.01■□□□□ 0.15
SHANK1-203ENST00000391813 MBD3L2Q8NHZ7 208 aaPredicted RBP16.01■□□□□ 0.15
SHANK1-203ENST00000391813 KLF12Q9Y4X4 402 aa16.01■□□□□ 0.15
SHANK1-203ENST00000391813 TRAV12-3A0A0B4J271 114 aa16.01■□□□□ 0.15
SHANK1-203ENST00000391813 IGHV1-24A0A0C4DH33 117 aa16.01■□□□□ 0.15
SHANK1-203ENST00000391813 IGFL3Q6UXB1 125 aa16.01■□□□□ 0.15
SHANK1-203ENST00000391813 IGKV3-20P01619 116 aa16.01■□□□□ 0.15
SHANK1-203ENST00000391813 GNLYP22749 145 aa16.01■□□□□ 0.15
SHANK1-203ENST00000391813 IGKV2-40A0A087WW87 121 aaPredicted RBP16■□□□□ 0.15
SHANK1-203ENST00000391813 IGKV2D-40P01614 121 aaPredicted RBP16■□□□□ 0.15
SHANK1-203ENST00000391813 FXYD7P58549 80 aa16■□□□□ 0.15
SHANK1-203ENST00000391813 DEFB125Q8N687 156 aa16■□□□□ 0.15
SHANK1-203ENST00000391813 CD7P09564 240 aa16■□□□□ 0.15
SHANK1-203ENST00000391813 PDE6HQ13956 83 aa16■□□□□ 0.15
SHANK1-203ENST00000391813 PCNX2A6NKB5 2137 aa16■□□□□ 0.15
SHANK1-203ENST00000391813 DTX1Q86Y01 620 aa16■□□□□ 0.15
SHANK1-203ENST00000391813 PRO3102Q9H379 93 aa16■□□□□ 0.15
SHANK1-203ENST00000391813 HAPLN4Q86UW8 402 aa16■□□□□ 0.15
SHANK1-203ENST00000391813 IGHV1-18A0A0C4DH31 117 aa15.99■□□□□ 0.15
SHANK1-203ENST00000391813 CCL25O15444 150 aa15.99■□□□□ 0.15
SHANK1-203ENST00000391813 DUX5Q96PT3 197 aa15.99■□□□□ 0.15
SHANK1-203ENST00000391813 SPANXDQ9BXN6 97 aa15.99■□□□□ 0.15
SHANK1-203ENST00000391813 FAM104BQ5XKR9 115 aa15.99■□□□□ 0.15
SHANK1-203ENST00000391813 MORN3Q6PF18 240 aaPredicted RBP15.99■□□□□ 0.15
SHANK1-203ENST00000391813 TSC2P49815 1807 aa15.99■□□□□ 0.15
SHANK1-203ENST00000391813 DPH3P1Q9H4G8 78 aa15.99■□□□□ 0.15
SHANK1-203ENST00000391813 ABCA4P78363 2273 aa15.98■□□□□ 0.15
SHANK1-203ENST00000391813 H0YJW9 148 aa15.98■□□□□ 0.15
SHANK1-203ENST00000391813 TMEM14BQ9NUH8 114 aa15.98■□□□□ 0.15
SHANK1-203ENST00000391813 GGTLC3B5MD39 225 aa15.98■□□□□ 0.15
SHANK1-203ENST00000391813 CD28P10747 220 aa15.98■□□□□ 0.15
SHANK1-203ENST00000391813 IGHV3OR16-12A0A075B7B8 117 aa15.98■□□□□ 0.15
SHANK1-203ENST00000391813 TAL2Q16559 108 aa15.98■□□□□ 0.15
SHANK1-203ENST00000391813 METRNQ9UJH8 293 aa15.98■□□□□ 0.15
SHANK1-203ENST00000391813 ROS1P08922 2347 aa15.98■□□□□ 0.15
SHANK1-203ENST00000391813 LMO1P25800 156 aa15.98■□□□□ 0.15
SHANK1-203ENST00000391813 HAX1O00165 279 aa15.97■□□□□ 0.15
SHANK1-203ENST00000391813 TNFRSF6BO95407 300 aa15.97■□□□□ 0.15
SHANK1-203ENST00000391813 ZNF48Q96MX3 618 aaPredicted RBP15.97■□□□□ 0.15
SHANK1-203ENST00000391813 C9JAW5 83 aa15.97■□□□□ 0.15
SHANK1-203ENST00000391813 HEATR5AQ86XA9 2040 aa15.97■□□□□ 0.15
SHANK1-203ENST00000391813 VCYO14598 125 aa15.96■□□□□ 0.15
SHANK1-203ENST00000391813 IGHV1-46P01743 117 aa15.96■□□□□ 0.15
SHANK1-203ENST00000391813 THBDP07204 575 aa15.96■□□□□ 0.15
SHANK1-203ENST00000391813 WIPF2Q8TF74 440 aaPredicted RBP15.96■□□□□ 0.15
SHANK1-203ENST00000391813 HS3ST6Q96QI5 342 aa15.96■□□□□ 0.15
SHANK1-203ENST00000391813 TRAV40A0A0B4J280 105 aa15.96■□□□□ 0.14
SHANK1-203ENST00000391813 LINC00205P59089 165 aa15.96■□□□□ 0.14
SHANK1-203ENST00000391813 RCHY1Q96PM5 261 aa15.96■□□□□ 0.14
SHANK1-203ENST00000391813 IGKV3OR2-268A0A0C4DH90 116 aa15.95■□□□□ 0.14
SHANK1-203ENST00000391813 MYOD1P15172 320 aa15.95■□□□□ 0.14
SHANK1-203ENST00000391813 AZU1P20160 251 aa15.95■□□□□ 0.14
SHANK1-203ENST00000391813 LSM4Q9Y4Z0 139 aaKnown RBP15.95■□□□□ 0.14
SHANK1-203ENST00000391813 MYLKQ15746 1914 aa15.95■□□□□ 0.14
SHANK1-203ENST00000391813 TIMM23O14925 209 aa15.95■□□□□ 0.14
SHANK1-203ENST00000391813 ZCCHC24Q8N2G6 241 aaKnown RBP15.95■□□□□ 0.14
SHANK1-203ENST00000391813 PLXNA4Q9HCM2 1894 aa15.95■□□□□ 0.14
SHANK1-203ENST00000391813 PRSS46E5RG02 174 aa15.95■□□□□ 0.14
SHANK1-203ENST00000391813 TMEM75Q8N9X5 138 aa15.95■□□□□ 0.14
SHANK1-203ENST00000391813 CEACAM8P31997 349 aaPredicted RBP15.95■□□□□ 0.14
SHANK1-203ENST00000391813 VGLL1Q99990 258 aa15.95■□□□□ 0.14
SHANK1-203ENST00000391813 LHFPL4Q7Z7J7 247 aa15.94■□□□□ 0.14
SHANK1-203ENST00000391813 TOMM7Q9P0U1 55 aa15.94■□□□□ 0.14
SHANK1-203ENST00000391813 FRMPD3Q5JV73 1810 aa15.94■□□□□ 0.14
SHANK1-203ENST00000391813 KLF5Q13887 457 aaPredicted RBP15.94■□□□□ 0.14
SHANK1-203ENST00000391813 DUSP14O95147 198 aaKnown RBP15.94■□□□□ 0.14
SHANK1-203ENST00000391813 MLANAQ16655 118 aa15.94■□□□□ 0.14
SHANK1-203ENST00000391813 C7orf69Q9H7B7 122 aa15.94■□□□□ 0.14
SHANK1-203ENST00000391813 NLRC5Q86WI3 1866 aa15.94■□□□□ 0.14
SHANK1-203ENST00000391813 SMKR1H3BMG3 65 aa15.94■□□□□ 0.14
SHANK1-203ENST00000391813 IGLV3-1P01715 115 aa15.94■□□□□ 0.14
SHANK1-203ENST00000391813 DUX3Q96PT4 197 aa15.94■□□□□ 0.14
SHANK1-203ENST00000391813 SRSF8Q9BRL6 282 aaKnown RBP15.94■□□□□ 0.14
SHANK1-203ENST00000391813 SHANK2-AS3Q9BTD1 123 aa15.94■□□□□ 0.14
SHANK1-203ENST00000391813 B3GALT5-AS1P59052 145 aa15.93■□□□□ 0.14
SHANK1-203ENST00000391813 MYO7BQ6PIF6 2116 aa15.93■□□□□ 0.14
SHANK1-203ENST00000391813 LGALS1P09382 135 aaKnown RBP15.93■□□□□ 0.14
SHANK1-203ENST00000391813 LY6EQ16553 131 aa15.93■□□□□ 0.14
SHANK1-203ENST00000391813 IGF2-ASQ6U949 168 aa15.93■□□□□ 0.14
SHANK1-203ENST00000391813 SSC4DQ8WTU2 575 aa15.93■□□□□ 0.14
SHANK1-203ENST00000391813 CSTL1Q9H114 145 aa15.92■□□□□ 0.14
SHANK1-203ENST00000391813 CFHR2P36980 270 aa15.92■□□□□ 0.14
SHANK1-203ENST00000391813 SPAG8Q99932 426 aaPredicted RBP15.92■□□□□ 0.14
SHANK1-203ENST00000391813 NOTCH4Q99466 2003 aa15.92■□□□□ 0.14
SHANK1-203ENST00000391813 C9orf139Q6ZV77 190 aa15.92■□□□□ 0.14
SHANK1-203ENST00000391813 C11orf68Q9H3H3 251 aaKnown RBP15.92■□□□□ 0.14
SHANK1-203ENST00000391813 PLA2G2EQ9NZK7 142 aa15.92■□□□□ 0.14
SHANK1-203ENST00000391813 IGKV1D-17A0A075B6S4 117 aa15.92■□□□□ 0.14
SHANK1-203ENST00000391813 A0A0G2JNJ9 132 aa15.92■□□□□ 0.14
SHANK1-203ENST00000391813 EFNA4P52798 201 aa15.92■□□□□ 0.14
SHANK1-203ENST00000391813 Q9UFV3 132 aa15.92■□□□□ 0.14
SHANK1-203ENST00000391813 IGHV1-8P0DP01 117 aa15.91■□□□□ 0.14
SHANK1-203ENST00000391813 S100A7L2Q5SY68 101 aa15.91■□□□□ 0.14
SHANK1-203ENST00000391813 SHANK1Q9Y566 2161 aa15.91■□□□□ 0.14
SHANK1-203ENST00000391813 NEGR1Q7Z3B1 354 aa15.91■□□□□ 0.14
SHANK1-203ENST00000391813 TRGV11A0A075B6L2 103 aa15.91■□□□□ 0.14
SHANK1-203ENST00000391813 RNASE8Q8TDE3 154 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms