RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 SPANXB1Q9NS25 103 aaPredicted RBP-3.05□□□□□ -2.9
SNORA40-201ENST00000388090 CMTM6Q9NX76 183 aa-3.05□□□□□ -2.9
SNORA40-201ENST00000388090 ARL5AQ9Y689 179 aa-3.05□□□□□ -2.9
SNORA40-201ENST00000388090 ZNF815PA8K554 130 aa-3.06□□□□□ -2.9
SNORA40-201ENST00000388090 ATP5G3P48201 142 aa-3.06□□□□□ -2.9
SNORA40-201ENST00000388090 SSBP3-AS1Q7Z2R9 100 aa-3.06□□□□□ -2.9
SNORA40-201ENST00000388090 OR52E6Q96RD3 313 aa-3.06□□□□□ -2.9
SNORA40-201ENST00000388090 TMEM133Q9H2Q1 129 aa-3.06□□□□□ -2.9
SNORA40-201ENST00000388090 UCK1Q9HA47 277 aa-3.06□□□□□ -2.9
SNORA40-201ENST00000388090 POPDC3Q9HBV1 291 aa-3.06□□□□□ -2.9
SNORA40-201ENST00000388090 BIN3Q9NQY0 253 aa-3.06□□□□□ -2.9
SNORA40-201ENST00000388090 RABL2AQ9UBK7 228 aaPredicted RBP-3.06□□□□□ -2.9
SNORA40-201ENST00000388090 VIRMAQ69YN4 1812 aaKnown RBP-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 A0A1B0GV50 99 aa-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 HLA-DRB1P01911 266 aa-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 OR10J4P0C629 311 aa-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 RAB5CP51148 216 aa-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 SNRPD3P62318 126 aaKnown RBP-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 EIF5AP63241 154 aaKnown RBP-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 SLAMF1Q13291 335 aa-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 ST13P4Q8IZP2 240 aaPredicted RBP-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 HYLS1Q96M11 299 aa-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 C1orf109Q9NX04 203 aa-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 TMEM56-RWDD3S4R434 201 aa-3.07□□□□□ -2.9
SNORA40-201ENST00000388090 SPG11Q96JI7 2443 aa-3.08□□□□□ -2.9
SNORA40-201ENST00000388090 NIPBLQ6KC79 2804 aaeCLIP-3.08□□□□□ -2.9
SNORA40-201ENST00000388090 SPTBN4Q9H254 2564 aa-3.08□□□□□ -2.9
SNORA40-201ENST00000388090 CXCR6O00574 342 aa-3.08□□□□□ -2.9
SNORA40-201ENST00000388090 NDUFB3O43676 98 aa-3.08□□□□□ -2.9
SNORA40-201ENST00000388090 ORM1P02763 201 aa-3.08□□□□□ -2.9
SNORA40-201ENST00000388090 SERPINE1P05121 402 aa-3.08□□□□□ -2.9
SNORA40-201ENST00000388090 TNNC1P63316 161 aa-3.08□□□□□ -2.9
SNORA40-201ENST00000388090 C19orf60Q96EN9 201 aa-3.08□□□□□ -2.9
SNORA40-201ENST00000388090 C20orf27Q9GZN8 174 aa-3.08□□□□□ -2.9
SNORA40-201ENST00000388090 PRTFDC1Q9NRG1 225 aa-3.08□□□□□ -2.9
SNORA40-201ENST00000388090 TRGV10A0A0A0MS01 117 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 A0A0D9SFI3 127 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 HIGD1CA8MV81 97 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 EVPLLA8MZ36 301 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 SMIM10L2AP0DMW4 78 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 SMIM10L2BP0DMW5 78 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 CCL2P13500 99 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 SYT1P21579 422 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 CSAG1Q6PB30 78 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 ALKAL1Q6UXT8 129 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 COMMD7Q86VX2 200 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 CD302Q8IX05 232 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 FBXO5Q9UKT4 447 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 RREB1Q92766 1687 aa-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 PRRC2CQ9Y520 2896 aaKnown RBP-3.09□□□□□ -2.9
SNORA40-201ENST00000388090 DOCK11Q5JSL3 2073 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 LAMA1P25391 3075 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 DNAH2Q9P225 4427 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 H0YIV9 168 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 SRIP30626 198 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 KDELR2P33947 212 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 SPAG11AQ6PDA7 123 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 LRRC18Q8N456 261 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 OR5D16Q8NGK9 328 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 GRPEL2Q8TAA5 225 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 SMIM11BQ8TCY0 68 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 SPRR2FQ96RM1 72 aa-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 UPF3BQ9BZI7 483 aaKnown RBP-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 BLMP54132 1417 aaPredicted RBP-3.1□□□□□ -2.91
SNORA40-201ENST00000388090 NUP155O75694 1391 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 CPDO75976 1380 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 PLXNA1Q9UIW2 1896 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 BIRC5O15392 142 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 UCHL3P15374 230 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 RPS20P60866 119 aaKnown RBP-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 RAB5BP61020 215 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 PMAIP1Q13794 54 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 C22orf39Q6P5X5 142 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 SMIM19Q96E16 107 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 ZHX1-C8orf76Q96EF9 292 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 TEP1Q99973 2627 aaKnown RBP-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 NCOA1Q15788 1441 aa-3.11□□□□□ -2.91
SNORA40-201ENST00000388090 C9JAW5 83 aa-3.12□□□□□ -2.91
SNORA40-201ENST00000388090 NDUFS8O00217 210 aa-3.12□□□□□ -2.91
SNORA40-201ENST00000388090 RPL5P46777 297 aaKnown RBP-3.12□□□□□ -2.91
SNORA40-201ENST00000388090 SULT1A1P50225 295 aa-3.12□□□□□ -2.91
SNORA40-201ENST00000388090 SNRPD2P62316 118 aaKnown RBP-3.12□□□□□ -2.91
SNORA40-201ENST00000388090 NEDD8Q15843 81 aa-3.12□□□□□ -2.91
SNORA40-201ENST00000388090 C1orf195Q5TG92 126 aa-3.12□□□□□ -2.91
SNORA40-201ENST00000388090 SREK1IP1Q8N9Q2 155 aaPredicted RBP-3.12□□□□□ -2.91
SNORA40-201ENST00000388090 GNPDA2Q8TDQ7 276 aa-3.12□□□□□ -2.91
SNORA40-201ENST00000388090 CCDC124Q96CT7 223 aaKnown RBP-3.12□□□□□ -2.91
SNORA40-201ENST00000388090 NUP98P52948 1817 aa-3.12□□□□□ -2.91
SNORA40-201ENST00000388090 IQSEC2Q5JU85 1478 aa-3.13□□□□□ -2.91
SNORA40-201ENST00000388090 hDV103S1A0JD37 113 aa-3.13□□□□□ -2.91
SNORA40-201ENST00000388090 IGF2P01344 180 aa-3.13□□□□□ -2.91
SNORA40-201ENST00000388090 APODP05090 189 aa-3.13□□□□□ -2.91
SNORA40-201ENST00000388090 H3F3AP84243 136 aa-3.13□□□□□ -2.91
SNORA40-201ENST00000388090 STAG3L4Q8TBR4 150 aa-3.13□□□□□ -2.91
SNORA40-201ENST00000388090 FAM172AQ8WUF8 416 aa-3.13□□□□□ -2.91
SNORA40-201ENST00000388090 PKD1P98161 4303 aa-3.13□□□□□ -2.91
SNORA40-201ENST00000388090 ARHGAP31Q2M1Z3 1444 aa-3.13□□□□□ -2.91
SNORA40-201ENST00000388090 TRAV22A0A0B4J277 110 aa-3.14□□□□□ -2.91
SNORA40-201ENST00000388090 SRP14P37108 136 aaKnown RBP-3.14□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms