RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PARD6GQ9BYG4 376 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 TRIM4Q9C037 500 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 WFDC10AQ9H1F0 79 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 HMCN2Q8NDA2 5059 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 NUPR2A6NF83 97 aa-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 ZNF727A8MUV8 499 aa-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 IGHV3-33P01772 117 aa-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 HLA-EP13747 358 aa-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 LSM6P62312 80 aaKnown RBP-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 C10orf99Q6UWK7 81 aa-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 Q6ZQY7 126 aa-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 ARPINQ7Z6K5 226 aa-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 PPTC7Q8NI37 304 aa-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 OR52A1Q9UKL2 312 aa-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 PRELID3BQ9Y3B1 194 aa-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 CEP164Q9UPV0 1460 aa-0.35□□□□□ -2.47
RNU6-541P-201ENST00000384709 SMIM23A6NLE4 172 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 GGCTO75223 188 aaKnown RBP-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 OR10J4P0C629 311 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 FXYD4P59646 89 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 UBE2BP63146 152 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 MYL5Q02045 173 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 ASB16-AS1Q495Z4 193 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 TMEM14EPQ6UXP3 125 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 TRAPPC5Q8IUR0 188 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 POP5Q969H6 163 aaKnown RBP-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 GGACTQ9BVM4 153 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 IMUPQ9GZP8 106 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 SPAG17Q6Q759 2223 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 ABCA4P78363 2273 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 DOPEY2Q9Y3R5 2298 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 FLNCQ14315 2725 aa-0.36□□□□□ -2.47
RNU6-541P-201ENST00000384709 TAX1BP3O14907 124 aa-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 TCRBP04435 133 aa-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 ATP5G3P48201 142 aa-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 AESQ08117 197 aa-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 BCL2L15Q5TBC7 163 aa-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 DDI1Q8WTU0 396 aa-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 RAB37Q96AX2 223 aa-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 HYLS1Q96M11 299 aa-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 CCDC42Q96M95 316 aa-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 HELZP42694 1942 aaKnown RBP-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 PCF11O94913 1555 aaKnown RBP-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 CADP27708 2225 aa-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 DLEC1Q9Y238 1755 aa-0.37□□□□□ -2.47
RNU6-541P-201ENST00000384709 ZFYVE9O95405 1425 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 A0A0J9YY99 117 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 M0R233 179 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 CYBAP13498 195 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 RAB5CP51148 216 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 DYNLT3P51808 116 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 MYL6P60660 151 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 VBP1P61758 197 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 EIF3IQ13347 325 aaKnown RBP-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 OTUD6BQ8N6M0 293 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 OR5D16Q8NGK9 328 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 RMND5BQ96G75 393 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 CCL19Q99731 98 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 TCEAL2Q9H3H9 227 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 ADCY9O60503 1353 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 PLXNA2O75051 1894 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 PLXNA1Q9UIW2 1896 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 F5P12259 2224 aa-0.38□□□□□ -2.47
RNU6-541P-201ENST00000384709 TRAV23DV6A0A075B6W5 121 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 TMEM256-PLSCR3K7ERE1 68 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 RPP14O95059 124 aaKnown RBP-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 PDE6GP18545 87 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 ERP29P30040 261 aaKnown RBP-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 DEFA3P59666 94 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 OCIAD2Q56VL3 154 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 PTRHD1Q6GMV3 140 aaKnown RBP-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 LINC00299Q6ZSB3 139 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 LYG2Q86SG7 212 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 C10orf111Q8N326 155 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 OR8J2Q8NGG1 315 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 GNPDA2Q8TDQ7 276 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 PRAP1Q96NZ9 151 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 NPCDR1Q9BY65 106 aa-0.39□□□□□ -2.47
RNU6-541P-201ENST00000384709 FAM159BA6NKW6 160 aa-0.4□□□□□ -2.47
RNU6-541P-201ENST00000384709 IFNA7P01567 189 aa-0.4□□□□□ -2.47
RNU6-541P-201ENST00000384709 CCL7P80098 99 aa-0.4□□□□□ -2.47
RNU6-541P-201ENST00000384709 RGS21Q2M5E4 152 aa-0.4□□□□□ -2.47
RNU6-541P-201ENST00000384709 EIF5AL1Q6IS14 154 aaKnown RBP-0.4□□□□□ -2.47
RNU6-541P-201ENST00000384709 PXT1Q8NFP0 134 aa-0.4□□□□□ -2.47
RNU6-541P-201ENST00000384709 KIFC1Q9BW19 673 aa-0.4□□□□□ -2.47
RNU6-541P-201ENST00000384709 ARL5AQ9Y689 179 aa-0.4□□□□□ -2.47
RNU6-541P-201ENST00000384709 FER1L6Q2WGJ9 1857 aa-0.4□□□□□ -2.47
RNU6-541P-201ENST00000384709 NSD1Q96L73 2696 aaPredicted RBP-0.41□□□□□ -2.47
RNU6-541P-201ENST00000384709 hDV103S1A0JD37 113 aa-0.41□□□□□ -2.48
RNU6-541P-201ENST00000384709 NIPSNAP2O75323 286 aa-0.41□□□□□ -2.48
RNU6-541P-201ENST00000384709 LYPLA2O95372 231 aa-0.41□□□□□ -2.48
RNU6-541P-201ENST00000384709 C1QBP02746 253 aa-0.41□□□□□ -2.48
RNU6-541P-201ENST00000384709 SERPINB9P50453 376 aa-0.41□□□□□ -2.48
RNU6-541P-201ENST00000384709 RPL37P61927 97 aaKnown RBP-0.41□□□□□ -2.48
RNU6-541P-201ENST00000384709 AKAP11Q9UKA4 1901 aa-0.41□□□□□ -2.48
RNU6-541P-201ENST00000384709 DOCK11Q5JSL3 2073 aa-0.41□□□□□ -2.48
RNU6-541P-201ENST00000384709 KMT2AQ03164 3969 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 MYCBP2O75592 4640 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 TMEM114B3SHH9 223 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms